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Tan0021413 (gene) of Snake gourd v1 genome

Gene IDTan0021413
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionWD repeat protein
Genome locationLG11:8491769..8496039
RNA-Seq ExpressionTan0021413
SyntenyTan0021413
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602211.1 hypothetical protein SDJN03_07444, partial [Cucurbita argyrosperma subsp. sororia]1.3e-9792.35Show/hide
Query:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ +S SEIREIEET SNSEL+ L+QSQNPSS SKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNP+NGRSIL YRDGAEIYIDGEPKDSLIKPVTRIVF VAIITI+ITLLSTSR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_008456707.1 PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo]4.5e-9590.62Show/hide
Query:  ESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPK
        +SE+EIRE++ET S SELQPL+++QNPSS SKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNP+
Subjt:  ESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPK

Query:  NGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSIL YRDGAEI+IDGEPKDSLIKPVTRI+FGVAIITILIT L  SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  NGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_022960369.1 uncharacterized protein LOC111461110 [Cucurbita moschata]2.8e-9792.35Show/hide
Query:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ +SESEIREIEET SNSELQPL+QSQNPSS SKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNP+NGRSIL YR GAEIYIDGEPKDSLIKPVT IVF VAIITI+ITLLSTSR SQGWMK LNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_022990468.1 uncharacterized protein LOC111487320 [Cucurbita maxima]1.3e-9993.88Show/hide
Query:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ +SESEIREIEET SNSELQPL+QSQNPSS S+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNP+NGRSIL YRDGAEIYIDGEPKDSLIKPVTRIVF VAIITILITLLSTSR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_023518857.1 uncharacterized protein LOC111782248 [Cucurbita pepo subsp. pepo]1.9e-9892.86Show/hide
Query:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ +SESEIREIEET SNSELQPL+QS N SS SKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNP+NGRSIL YRDGAEIYIDGEPKDSLIKPVTRIVF VAIITI+ITLLSTSR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

TrEMBL top hitse value%identityAlignment
A0A0A0K9G4 Uncharacterized protein4.1e-9489.06Show/hide
Query:  ESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPK
        +SESEIRE+EET S SELQPL+++ NPSS SK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNP+
Subjt:  ESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPK

Query:  NGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSIL YRDGAEI+IDGEPKDSLIKPVTRI+FGVAIITILIT L  SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  NGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A1S3C3V7 uncharacterized protein LOC1034965712.2e-9590.62Show/hide
Query:  ESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPK
        +SE+EIRE++ET S SELQPL+++QNPSS SKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNP+
Subjt:  ESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPK

Query:  NGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSIL YRDGAEI+IDGEPKDSLIKPVTRI+FGVAIITILIT L  SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  NGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A6J1BYH2 uncharacterized protein LOC1110067356.9e-9488.72Show/hide
Query:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MENP++ESEIREIEETGSNSE QPL+QSQNPSS SK VKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLE+REILDKYGFKS FAFKP++GRGVPIR
Subjt:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYG
        FNP+NGRSIL YRDGAEIYIDGEPKDSLIKP+TRI+FGVAI+TILIT L  SR+SQG MKKLNI+GNFPPWILACVVIVFTRSRKRTRDLLKK+G
Subjt:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYG

A0A6J1HAT7 uncharacterized protein LOC1114611101.3e-9792.35Show/hide
Query:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ +SESEIREIEET SNSELQPL+QSQNPSS SKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNP+NGRSIL YR GAEIYIDGEPKDSLIKPVT IVF VAIITI+ITLLSTSR SQGWMK LNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A6J1JTD1 uncharacterized protein LOC1114873206.5e-10093.88Show/hide
Query:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ +SESEIREIEET SNSELQPL+QSQNPSS S+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNP+NGRSIL YRDGAEIYIDGEPKDSLIKPVTRIVF VAIITILITLLSTSR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPKNGRSILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71780.1 unknown protein4.6e-6663.3Show/hide
Query:  REIEETGSNSELQPLIQSQNPSS--KSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPKNGRS
        +EIEET       PL+++  P S  +S T   KVPEVEIHLY+ GKGPIDVFKS+LGG++QDQLEVR IL+KYG K++FAF  + GR VPIRF+P+NGRS
Subjt:  REIEETGSNSELQPLIQSQNPSS--KSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPKNGRS

Query:  ILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        +L YRDGA IYIDGEP+DSL+KP+TRI+ GV I+T+LIT L   +D   W+K     G FPPW+LAC+VIVFTR+RKRTRD  KKYGW
Subjt:  ILVYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATCCAGAGAGCGAGAGCGAAATTCGAGAAATTGAAGAAACAGGCTCCAACTCGGAGCTGCAACCTCTTATTCAGAGCCAGAATCCGAGTTCGAAATCCAAAAC
AGTGAAGACGAAGGTTCCGGAGGTTGAGATCCATCTTTATCGGCAGGGCAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGGGGTTGGGATCAAGACCAGCTCGAGG
TCCGAGAGATTCTCGACAAATATGGCTTCAAATCCGTATTCGCCTTTAAACCTGATTCCGGTCGGGGCGTTCCGATTCGATTCAACCCTAAAAATGGCAGGTCTATACTG
GTTTACAGAGATGGAGCCGAAATTTACATCGACGGAGAGCCCAAGGATTCCCTGATCAAACCAGTAACCAGGATAGTTTTCGGCGTGGCAATTATTACCATTTTGATAAC
GCTTCTATCGACCTCGAGAGACTCACAAGGATGGATGAAGAAATTAAATATCACTGGGAACTTCCCTCCTTGGATTCTTGCTTGTGTCGTTATCGTTTTTACGCGCTCAA
GGAAGAGAACTAGGGACTTGCTGAAGAAGTACGGTTGGTGA
mRNA sequenceShow/hide mRNA sequence
GTTTTTTCTTAAAAAAAAAAAATCGAATTTTTTGACGGGGCAACGAGTCCAATTACGCGAACAAATCCGGTTAGAACAAATAAAATCCACGACCGTACATCAAATCAGGG
CGCGAAATGGAGAATCCAGAGAGCGAGAGCGAAATTCGAGAAATTGAAGAAACAGGCTCCAACTCGGAGCTGCAACCTCTTATTCAGAGCCAGAATCCGAGTTCGAAATC
CAAAACAGTGAAGACGAAGGTTCCGGAGGTTGAGATCCATCTTTATCGGCAGGGCAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGGGGTTGGGATCAAGACCAGC
TCGAGGTCCGAGAGATTCTCGACAAATATGGCTTCAAATCCGTATTCGCCTTTAAACCTGATTCCGGTCGGGGCGTTCCGATTCGATTCAACCCTAAAAATGGCAGGTCT
ATACTGGTTTACAGAGATGGAGCCGAAATTTACATCGACGGAGAGCCCAAGGATTCCCTGATCAAACCAGTAACCAGGATAGTTTTCGGCGTGGCAATTATTACCATTTT
GATAACGCTTCTATCGACCTCGAGAGACTCACAAGGATGGATGAAGAAATTAAATATCACTGGGAACTTCCCTCCTTGGATTCTTGCTTGTGTCGTTATCGTTTTTACGC
GCTCAAGGAAGAGAACTAGGGACTTGCTGAAGAAGTACGGTTGGTGAATCTCATTCTCCAGGCCTTTCTCTACTGTTTTTTAATCAATCCTCAAATAGAAAATAGAAAGT
TGATTATTGTTTCTTGATTTGAAGCTCTGGAAATAGGAGAAATGAAACTGTATGTATTGCTAGCGAAAATGGAACATTCTTGGTCCATTGCTATCATAAAATTCCCTGCC
TTTGATTTGTTTTTTTAACATGTGTAGATAAGCAGTTCTGTTTAAATGGAATATGTTTGCCCCATGGGCTTTTAATTAGGTTGAGTGATATATTTCATTAATGTGAGTTA
TATAATTCGGATTTGTGTATAGCTCATTTGTGATAAGTACATTTACTTATTGATTTGACTTTATATTCTGAGTCTAAACTAATCGCTGTCATAATT
Protein sequenceShow/hide protein sequence
MENPESESEIREIEETGSNSELQPLIQSQNPSSKSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPKNGRSIL
VYRDGAEIYIDGEPKDSLIKPVTRIVFGVAIITILITLLSTSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW