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Tan0021456 (gene) of Snake gourd v1 genome

Gene IDTan0021456
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:5010011..5010478
RNA-Seq ExpressionTan0021456
SyntenyTan0021456
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061157.1 hypothetical protein E6C27_scaffold753G00260 [Cucumis melo var. makuwa]1.0e-1268.49Show/hide
Query:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWMLF
        MAARPSAVLS +LV  LLL+ V NAHEGH HPPSSE   APP  H+A  A++NS+SY WSMAMAMVAAS  +F
Subjt:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWMLF

KAG6576850.1 hypothetical protein SDJN03_24424, partial [Cucurbita argyrosperma subsp. sororia]9.9e-1675.34Show/hide
Query:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWMLF
        MAARPSAVL+ VLVA LLLV VA AHEGH HPPSS+P  APP  H+A TAV NS+SY WSMA+AMVA+SWMLF
Subjt:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWMLF

KAG7030901.1 Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]6.2e-1878.08Show/hide
Query:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWMLF
        MAARPSAVLSFVL A+LLLV VAN HEGH HPPSSEPT +PP G +A  A+MNS SYSWSM MAMVA SWMLF
Subjt:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWMLF

KGN53725.1 hypothetical protein Csa_014716 [Cucumis sativus]2.2e-1573.61Show/hide
Query:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWML
        MAA PSAVLS VLVA LLL+CVANAHEGH HPPSSE   APP  H A  A++NS+SY WSMAMAMVAASW++
Subjt:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWML

TYK29918.1 hypothetical protein E5676_scaffold652G00020 [Cucumis melo var. makuwa]3.5e-1369.86Show/hide
Query:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWMLF
        MAARPSAVLS +LV  LLL+ V NAHEGH HPPSSE   APP  H+A  A+MNS+SY WSMAMAMVAAS  +F
Subjt:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWMLF

TrEMBL top hitse value%identityAlignment
A0A0A0KVS3 Uncharacterized protein1.1e-1573.61Show/hide
Query:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWML
        MAA PSAVLS VLVA LLL+CVANAHEGH HPPSSE   APP  H A  A++NS+SY WSMAMAMVAASW++
Subjt:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWML

A0A5A7V2Q5 Uncharacterized protein5.0e-1368.49Show/hide
Query:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWMLF
        MAARPSAVLS +LV  LLL+ V NAHEGH HPPSSE   APP  H+A  A++NS+SY WSMAMAMVAAS  +F
Subjt:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWMLF

A0A5D3E2A2 Uncharacterized protein1.7e-1369.86Show/hide
Query:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWMLF
        MAARPSAVLS +LV  LLL+ V NAHEGH HPPSSE   APP  H+A  A+MNS+SY WSMAMAMVAAS  +F
Subjt:  MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWMLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTCGTCCCTCTGCAGTTCTCAGCTTTGTGCTGGTGGCGCTGCTGCTACTCGTTTGCGTCGCTAATGCGCACGAGGGCCACGAGCATCCCCCATCCTCCGAGCC
TACTGGAGCTCCGCCATCCGGGCACGACGCTGGCACCGCCGTCATGAACAGCATTTCATACTCTTGGTCTATGGCTATGGCCATGGTGGCTGCTTCTTGGATGTTGTTTT
GA
mRNA sequenceShow/hide mRNA sequence
GCCTTTCAAAGTCTTCTCTTTGGCCATCTTTTCTCCTTCTTCTTCTTCTTAACAATGGCAGCTCGTCCCTCTGCAGTTCTCAGCTTTGTGCTGGTGGCGCTGCTGCTACT
CGTTTGCGTCGCTAATGCGCACGAGGGCCACGAGCATCCCCCATCCTCCGAGCCTACTGGAGCTCCGCCATCCGGGCACGACGCTGGCACCGCCGTCATGAACAGCATTT
CATACTCTTGGTCTATGGCTATGGCCATGGTGGCTGCTTCTTGGATGTTGTTTTGATTTTGTGAGAAAAGAAAATCTATTTTAATTTTATGTTATTTCAACTTCAGTTCC
TTCATGAAGTTCATATCCAAATATTTGTTTAATTATTGTGCGTATATTGGCAGTGTACCTCCTTGCATGAGGGTTTTTTTTTTTAAATCTTGGTCTCATCTCGATGAGTA
AAGCAATGTTTATTTAAATAATAATTAC
Protein sequenceShow/hide protein sequence
MAARPSAVLSFVLVALLLLVCVANAHEGHEHPPSSEPTGAPPSGHDAGTAVMNSISYSWSMAMAMVAASWMLF