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Tan0021465 (gene) of Snake gourd v1 genome

Gene IDTan0021465
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 27
Genome locationLG11:26955642..26955945
RNA-Seq ExpressionTan0021465
SyntenyTan0021465
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063931.1 putative Clavata3/esr-related 43 [Cucumis melo var. makuwa]8.3e-1455.29Show/hide
Query:  GATPTRRRRFLSSFLIMAFFIWVIFCHH---------RHQERQVGGGGGSEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLHN
        GATP+RRRR LS F I+ FFIWV+  +             E    G  GS+E    KYFNGRS  SR F+ENKRTVPSCPDPLHN
Subjt:  GATPTRRRRFLSSFLIMAFFIWVIFCHH---------RHQERQVGGGGGSEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLHN

KAG6579278.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]9.1e-2966.34Show/hide
Query:  MVAFPAMCGGAT--PTRRRRFLSSFLIMAFFIWVIFCHHRHQ--------------ERQVGGGGGSEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLH
        MV FPAM GG    P RRRRFLSSF ++ FFIWV+FCHHRHQ              E+ V GG GS+EKLLR YFNGRSF SRGFQE KRTVPSCPDPLH
Subjt:  MVAFPAMCGGAT--PTRRRRFLSSFLIMAFFIWVIFCHHRHQ--------------ERQVGGGGGSEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLH

Query:  N
        N
Subjt:  N

KAG6601785.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]8.8e-2463.04Show/hide
Query:  MCGGATPTRRRRFLSSFLIMAFFIWVIFCHHR-------------HQERQVGGGGGSEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLHN
        MCGG TPTR+RRFLS+ L+MA FIWV+FCH                +E  VGGGGGS+EKLLRKYFNG     RGF++NKRTVPSCPDPLHN
Subjt:  MCGGATPTRRRRFLSSFLIMAFFIWVIFCHHR-------------HQERQVGGGGGSEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLHN

KAG7016789.1 hypothetical protein SDJN02_21899, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2668.48Show/hide
Query:  GGAT-PTRRRRFLSSFLIMAFFIWVIFCHHRHQ--------------ERQVGGGGGSEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLHN
        GGAT P RRRRFLSSF ++ FFIWV+FCHHRHQ              E+ V GG GS+EKLLR YFNGRSF SRGFQE KRTVPSCPDPLHN
Subjt:  GGAT-PTRRRRFLSSFLIMAFFIWVIFCHHRHQ--------------ERQVGGGGGSEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLHN

XP_040996054.1 CLAVATA3/ESR (CLE)-related protein 27 [Juglans microcarpa x Juglans regia]1.4e-0552.63Show/hide
Query:  RHQERQVGGGG---GSEEKLLRKYFNGRSF------NSRGFQENKRTVPSCPDPLHN
        R +E  +  G     S+E+LL KYFNGR+F      + +GF+ENKR VPSCPDPLHN
Subjt:  RHQERQVGGGG---GSEEKLLRKYFNGRSF------NSRGFQENKRTVPSCPDPLHN

TrEMBL top hitse value%identityAlignment
A0A2C9UKL3 Uncharacterized protein9.9e-0567.5Show/hide
Query:  SEEKLLRKYFNGR--SFNS--RGFQENKRTVPSCPDPLHN
        S+E L  K+FNGR  SFN+  +GF+ENKR VPSCPDPLHN
Subjt:  SEEKLLRKYFNGR--SFNS--RGFQENKRTVPSCPDPLHN

A0A2C9VNI0 Uncharacterized protein1.5e-0555.77Show/hide
Query:  RHQERQVGGGGGSEEKLLRKYFNGR--SFNS--RGFQENKRTVPSCPDPLHN
        +H+         +++ LLRK+FNGR  SFNS  +GF+ENKR VPSCPDPLHN
Subjt:  RHQERQVGGGGGSEEKLLRKYFNGR--SFNS--RGFQENKRTVPSCPDPLHN

A0A2I4HTU3 CLAVATA3/ESR (CLE)-related protein 277.6e-0562Show/hide
Query:  QVGG--GGG-----SEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLHN
        +VGG  GGG     S+E L+RK+FNGR+ N   F+ENKR VPSCPDPLHN
Subjt:  QVGG--GGG-----SEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLHN

A0A5A7VDX3 Putative Clavata3/esr-related 434.0e-1455.29Show/hide
Query:  GATPTRRRRFLSSFLIMAFFIWVIFCHH---------RHQERQVGGGGGSEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLHN
        GATP+RRRR LS F I+ FFIWV+  +             E    G  GS+E    KYFNGRS  SR F+ENKRTVPSCPDPLHN
Subjt:  GATPTRRRRFLSSFLIMAFFIWVIFCHH---------RHQERQVGGGGGSEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLHN

A0A6A1W705 CLAVATA3/ESR (CLE)-related protein 431.5e-0565Show/hide
Query:  SEEKLLRKYFNGRSF----NSRGFQENKRTVPSCPDPLHN
        ++E+LLRKYFNGR+F     + GF+E+KR VPSCPDPLHN
Subjt:  SEEKLLRKYFNGRSF----NSRGFQENKRTVPSCPDPLHN

SwissProt top hitse value%identityAlignment
Q9LUA1 CLAVATA3/ESR (CLE)-related protein 279.6e-0536.25Show/hide
Query:  TPTRRRRFLSSFLIMAFFIWVIFCHHRHQERQVGGGGGSEEKLLRKYFNG------RSFNSRGFQENKRTVPSCPDPLHN
        T T     L S+++  F ++      R        G   EE L++KYF         SF  +G  E+KR VPSCPDPLHN
Subjt:  TPTRRRRFLSSFLIMAFFIWVIFCHHRHQERQVGGGGGSEEKLLRKYFNG------RSFNSRGFQENKRTVPSCPDPLHN

Arabidopsis top hitse value%identityAlignment
AT3G25905.1 CLAVATA3/ESR-RELATED 276.8e-0636.25Show/hide
Query:  TPTRRRRFLSSFLIMAFFIWVIFCHHRHQERQVGGGGGSEEKLLRKYFNG------RSFNSRGFQENKRTVPSCPDPLHN
        T T     L S+++  F ++      R        G   EE L++KYF         SF  +G  E+KR VPSCPDPLHN
Subjt:  TPTRRRRFLSSFLIMAFFIWVIFCHHRHQERQVGGGGGSEEKLLRKYFNG------RSFNSRGFQENKRTVPSCPDPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCTTTTCCGGCAATGTGCGGCGGCGCCACTCCCACACGGCGGCGGCGATTTCTCTCATCTTTCTTGATTATGGCTTTCTTCATCTGGGTCATCTTCTGCCACCA
CCGCCACCAAGAAAGGCAAGTCGGCGGCGGTGGGGGAAGCGAGGAGAAGCTACTCCGGAAGTATTTCAATGGAAGGAGTTTCAATTCGAGAGGGTTTCAAGAGAACAAAC
GAACAGTCCCAAGCTGCCCCGATCCCCTCCACAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCTTTTCCGGCAATGTGCGGCGGCGCCACTCCCACACGGCGGCGGCGATTTCTCTCATCTTTCTTGATTATGGCTTTCTTCATCTGGGTCATCTTCTGCCACCA
CCGCCACCAAGAAAGGCAAGTCGGCGGCGGTGGGGGAAGCGAGGAGAAGCTACTCCGGAAGTATTTCAATGGAAGGAGTTTCAATTCGAGAGGGTTTCAAGAGAACAAAC
GAACAGTCCCAAGCTGCCCCGATCCCCTCCACAACTAG
Protein sequenceShow/hide protein sequence
MVAFPAMCGGATPTRRRRFLSSFLIMAFFIWVIFCHHRHQERQVGGGGGSEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLHN