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Tan0021499 (gene) of Snake gourd v1 genome

Gene IDTan0021499
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAuxin-regulated gene involved in organ size
Genome locationLG11:38026205..38027254
RNA-Seq ExpressionTan0021499
SyntenyTan0021499
Gene Ontology termsGO:0009725 - response to hormone (biological process)
GO:0046622 - positive regulation of organ growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR037468 - ARGOS/ARL/OSR1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61450.1 hypothetical protein Csa_006551 [Cucumis sativus]6.4e-4273.1Show/hide
Query:  MSLGFPEADNRGIPNPEDLVNNPQPQPQHYYYMDARS----------NRVPYY-----DRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLI
        M+LGF EA+ RG+PNP   ++  QP   HYY MD  S          NR+ YY     DRRKVEY RSLSQGT RRLVPAASYLGVLLCLAASLLILPL+
Subjt:  MSLGFPEADNRGIPNPEDLVNNPQPQPQHYYYMDARS----------NRVPYY-----DRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLI

Query:  LPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDIT-SSHTYM
        LPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDIT SSHTYM
Subjt:  LPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDIT-SSHTYM

XP_022930113.1 ARGOS-like protein [Cucurbita moschata]5.3e-3667.41Show/hide
Query:  MSLGFPEADNRGIPNPEDLV------NNPQPQPQHYYYMDARSNRVPYYDRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLILPPLPPPPL
        MSLG P+ D  G+PNP+D +      +N  P P HYY++   + +    ++R +EYTRSLSQGT RRLVPAA+YL VL+CLAASLLILPLILPPLP PPL
Subjt:  MSLGFPEADNRGIPNPEDLV------NNPQPQPQHYYYMDARSNRVPYYDRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLILPPLPPPPL

Query:  MLLLLLPIGILGMLMVLAFMPSNDTKDITSSHTYM
        MLLLLLPIGILGMLMVLAFMPSND KDI+SSHT M
Subjt:  MLLLLLPIGILGMLMVLAFMPSNDTKDITSSHTYM

XP_022974015.1 ARGOS-like protein [Cucurbita maxima]9.0e-3666.2Show/hide
Query:  MSLGFPEADNRGIPNPED---LVNNPQPQPQHYYYMDA--------RSNRVPY----YDRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLI
        MSLG P+AD  G+PNP+D   + ++    P HYY++ A         SN  PY     ++R +EYTRSLSQGT RRLVPAA+YL VL+CLAASLLILPLI
Subjt:  MSLGFPEADNRGIPNPED---LVNNPQPQPQHYYYMDA--------RSNRVPY----YDRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLI

Query:  LPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSHT
        LPPLPPPPLMLLLLLPIGI+GMLMVLAFMPSN  KDITSSHT
Subjt:  LPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSHT

XP_023514167.1 ARGOS-like protein [Cucurbita pepo subsp. pepo]5.3e-3662.34Show/hide
Query:  MSLGFPEADNRGIPNPEDLV------------NNPQPQPQHYYYMDA---------RSNRVPY----YDRRKVEYTRSLSQGTTRRLVPAASYLGVLLCL
        MSLG P+ D  G+PNP+D +            +N  P P HYY++ A          SN  P      ++R +EYTRSLSQGT RRLVPAA+YL VL+CL
Subjt:  MSLGFPEADNRGIPNPEDLV------------NNPQPQPQHYYYMDA---------RSNRVPY----YDRRKVEYTRSLSQGTTRRLVPAASYLGVLLCL

Query:  AASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSHTYM
        AASLLILPLILPPLP PPLMLLLLLPIGILGMLMVLAFMPSND KDI+SSHTYM
Subjt:  AASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSHTYM

XP_038875191.1 ARGOS-like protein [Benincasa hispida]5.6e-3869.18Show/hide
Query:  MSLGFPE-ADNRGIPNPEDLVNNPQPQPQHYYYMDA----------RSNRVPYY----DRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLI
        MSLGF E A+ +G+PNP+D +N  Q    +Y+ MD            +NR+ YY     RRK+EY+RSLSQGT RRLVPAASYLGVLLCLAASLLILPL+
Subjt:  MSLGFPE-ADNRGIPNPEDLVNNPQPQPQHYYYMDA----------RSNRVPYY----DRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLI

Query:  LPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDIT--SSHTYM
        LPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTK IT  SSHTYM
Subjt:  LPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDIT--SSHTYM

TrEMBL top hitse value%identityAlignment
A0A061ERG1 Auxin-regulated gene involved in organ size7.7e-1756.8Show/hide
Query:  RGIPNPEDLVNNPQPQPQHYYYMDARSNRVP--YYDRRKVEYTRSLSQGTTRRLVPAASY----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGI
        RGI N +D  +N          MD R+ +VP    +R+KVEY RS SQG  RRL+P + +    L +L+CL ASLLILPLILPPLPPPP  LLLLLPIGI
Subjt:  RGIPNPEDLVNNPQPQPQHYYYMDARSNRVP--YYDRRKVEYTRSLSQGTTRRLVPAASY----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGI

Query:  LGMLMVLAFMPSNDTKDITSSHTYM
        L +LM+LAFMPSN  +DIT  +TYM
Subjt:  LGMLMVLAFMPSNDTKDITSSHTYM

A0A0A0LHQ4 Uncharacterized protein3.1e-4273.1Show/hide
Query:  MSLGFPEADNRGIPNPEDLVNNPQPQPQHYYYMDARS----------NRVPYY-----DRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLI
        M+LGF EA+ RG+PNP   ++  QP   HYY MD  S          NR+ YY     DRRKVEY RSLSQGT RRLVPAASYLGVLLCLAASLLILPL+
Subjt:  MSLGFPEADNRGIPNPEDLVNNPQPQPQHYYYMDARS----------NRVPYY-----DRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLI

Query:  LPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDIT-SSHTYM
        LPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDIT SSHTYM
Subjt:  LPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDIT-SSHTYM

A0A2C9VY78 Uncharacterized protein1.2e-1457.27Show/hide
Query:  MDARSNRV-------PYY--DRRKVEYTRSLSQGTTRRLVPAASY----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDT
        MD RS ++       P++  +++KVEY RSLSQG+ R+L PA+ +    L +L+CL ASLLILPLILPPLPPPP  LLLLLPIGIL +LM+LAFMP+N  
Subjt:  MDARSNRV-------PYY--DRRKVEYTRSLSQGTTRRLVPAASY----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDT

Query:  KDITSSHTYM
        +DIT  +TY+
Subjt:  KDITSSHTYM

A0A6J1EU41 ARGOS-like protein2.5e-3667.41Show/hide
Query:  MSLGFPEADNRGIPNPEDLV------NNPQPQPQHYYYMDARSNRVPYYDRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLILPPLPPPPL
        MSLG P+ D  G+PNP+D +      +N  P P HYY++   + +    ++R +EYTRSLSQGT RRLVPAA+YL VL+CLAASLLILPLILPPLP PPL
Subjt:  MSLGFPEADNRGIPNPEDLV------NNPQPQPQHYYYMDARSNRVPYYDRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLILPPLPPPPL

Query:  MLLLLLPIGILGMLMVLAFMPSNDTKDITSSHTYM
        MLLLLLPIGILGMLMVLAFMPSND KDI+SSHT M
Subjt:  MLLLLLPIGILGMLMVLAFMPSNDTKDITSSHTYM

A0A6J1ICV1 ARGOS-like protein4.3e-3666.2Show/hide
Query:  MSLGFPEADNRGIPNPED---LVNNPQPQPQHYYYMDA--------RSNRVPY----YDRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLI
        MSLG P+AD  G+PNP+D   + ++    P HYY++ A         SN  PY     ++R +EYTRSLSQGT RRLVPAA+YL VL+CLAASLLILPLI
Subjt:  MSLGFPEADNRGIPNPED---LVNNPQPQPQHYYYMDA--------RSNRVPY----YDRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLI

Query:  LPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSHT
        LPPLPPPPLMLLLLLPIGI+GMLMVLAFMPSN  KDITSSHT
Subjt:  LPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSHT

SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE2.2e-0848.35Show/hide
Query:  DRRKVEYTRSLSQGTTRRLVPAASY-----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSHTYM
        +  K E  R+ S  + +RL+  A+Y     L +L+ L ASLLILPL+LPPLPPPP M LLL+PIGI+ +L++LAFMPS+ ++    + T+M
Subjt:  DRRKVEYTRSLSQGTTRRLVPAASY-----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSHTYM

Q6NMD6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE4.8e-0852.87Show/hide
Query:  DRRKVEYTRSLSQGTTRRLVPAASY----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMP---SNDTKDIT
        ++ K E  RS S    R ++PA  +    L +L+ L ASLLILPL+LPPLPPPP M LLL+PIGI+ +L+VLAFMP   SN   D+T
Subjt:  DRRKVEYTRSLSQGTTRRLVPAASY----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMP---SNDTKDIT

Q7X6L2 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE8.5e-0560.87Show/hide
Query:  VLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMPS
        +L+C+ ASL+ILPL+LPPLPPPP M L+L+P+ +L +L+ LAFMP+
Subjt:  VLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMPS

Q8RXL7 ARGOS-like protein5.0e-1359.09Show/hide
Query:  KVEYTRSL-SQGTTRRLVPAASY----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSHTYM
        K E  R+L SQ + RRL+ A+ +    + VL+ L ASLLILPLILPPLPPPP M LLL+PIGI+ +LMVLAFMPS+++K ++SS T+M
Subjt:  KVEYTRSL-SQGTTRRLVPAASY----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSHTYM

Arabidopsis top hitse value%identityAlignment
AT2G44080.1 ARGOS-like3.5e-1459.09Show/hide
Query:  KVEYTRSL-SQGTTRRLVPAASY----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSHTYM
        K E  R+L SQ + RRL+ A+ +    + VL+ L ASLLILPLILPPLPPPP M LLL+PIGI+ +LMVLAFMPS+++K ++SS T+M
Subjt:  KVEYTRSL-SQGTTRRLVPAASY----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSHTYM

AT3G59900.1 auxin-regulated gene involved in organ size3.4e-0952.87Show/hide
Query:  DRRKVEYTRSLSQGTTRRLVPAASY----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMP---SNDTKDIT
        ++ K E  RS S    R ++PA  +    L +L+ L ASLLILPL+LPPLPPPP M LLL+PIGI+ +L+VLAFMP   SN   D+T
Subjt:  DRRKVEYTRSLSQGTTRRLVPAASY----LGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMVLAFMP---SNDTKDIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTTGGATTTCCAGAAGCCGATAACAGAGGGATTCCGAATCCAGAAGATTTGGTGAATAATCCACAACCACAACCACAACATTATTATTATATGGACGCCAGGTC
CAATAGAGTTCCTTATTACGACCGCCGGAAGGTGGAGTACACGCGCTCTCTATCTCAGGGCACGACCCGCCGGTTGGTTCCGGCCGCCAGCTATTTGGGGGTACTGCTAT
GCCTGGCGGCGTCGCTGTTGATCCTTCCGTTGATTCTCCCGCCGCTGCCACCGCCGCCGTTGATGCTGCTGCTTCTTCTTCCAATCGGGATATTGGGAATGCTTATGGTC
TTGGCGTTCATGCCTTCTAATGATACTAAGGATATTACCTCCTCTCATACGTATATGTAA
mRNA sequenceShow/hide mRNA sequence
CCATCTGCTCCTCTCTCTCTCTCTCACATCCTGTTGATTCATTAATTTTGATTTGGAGCATTGGAGTTTTATAAATGAGTCTTGGATTTCCAGAAGCCGATAACAGAGGG
ATTCCGAATCCAGAAGATTTGGTGAATAATCCACAACCACAACCACAACATTATTATTATATGGACGCCAGGTCCAATAGAGTTCCTTATTACGACCGCCGGAAGGTGGA
GTACACGCGCTCTCTATCTCAGGGCACGACCCGCCGGTTGGTTCCGGCCGCCAGCTATTTGGGGGTACTGCTATGCCTGGCGGCGTCGCTGTTGATCCTTCCGTTGATTC
TCCCGCCGCTGCCACCGCCGCCGTTGATGCTGCTGCTTCTTCTTCCAATCGGGATATTGGGAATGCTTATGGTCTTGGCGTTCATGCCTTCTAATGATACTAAGGATATT
ACCTCCTCTCATACGTATATGTAATGTAAATGTAAATGCTCTCTCTCTATCTCTCTCTTTTTTTTTTAATTCTTCTTTCTGAAAATTTTGTATCTCTCTTTTCTCTTTCT
CTTTCTGTTCATCTAAAGAAAAAAAAAAAAGGAGACACTGAAAACGGTTCTTTGATTACTTTGGAATGGAAACCATATTTTCGGTTTAATAAAAATGAATCCGGCTGCTG
CATCTTCACTTTGCTTCTTTTGATTTGAGACGATGCTTTCAAATCAGATTTTCAACTTAATAAATCTTCTGTTTTTCAATTTACTTCTTCT
Protein sequenceShow/hide protein sequence
MSLGFPEADNRGIPNPEDLVNNPQPQPQHYYYMDARSNRVPYYDRRKVEYTRSLSQGTTRRLVPAASYLGVLLCLAASLLILPLILPPLPPPPLMLLLLLPIGILGMLMV
LAFMPSNDTKDITSSHTYM