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Tan0021532 (gene) of Snake gourd v1 genome

Gene IDTan0021532
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA ligase
Genome locationLG10:36666040..36667040
RNA-Seq ExpressionTan0021532
SyntenyTan0021532
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053852.1 hypothetical protein E6C27_scaffold135G002430 [Cucumis melo var. makuwa]3.7e-2166Show/hide
Query:  MGQKSVLSLSFLLLFLGFSFLISST---AVPSTRILKSTF-GHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPS
        MGQK     +F LLFL FSFL+SS+   AVP+TRILKSTF  HPS Q  V +D RD ++I  GDSF    ERLFEGR++LENNDYPGTGANNHHDPKSP+
Subjt:  MGQKSVLSLSFLLLFLGFSFLISST---AVPSTRILKSTF-GHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPS

KAG6580910.1 hypothetical protein SDJN03_20912, partial [Cucurbita argyrosperma subsp. sororia]6.7e-2368Show/hide
Query:  MGQKSVLSLS-FLLLFLGFSFLISSTAVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPSAKP
        MGQK  LSL   LLLFLGFS L+SS AVP+TRI KSTF  PSAQDFVFQD RD ++ +GGD F         GR VLENNDYPGTGANNHHDP +P AKP
Subjt:  MGQKSVLSLS-FLLLFLGFSFLISSTAVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPSAKP

KAG6596972.1 hypothetical protein SDJN03_10152, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2972.73Show/hide
Query:  MGQKSVLSLSFLLLFLGFSFLISSTAVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPSAKP
        MG K +L L+FLLLFL F+FLISSTAVP+TR+L+S F  PSAQ  VFQD RD ++ISG DS E V+ERL EGR+VLENNDYPGTGANNHHDPKSP+ KP
Subjt:  MGQKSVLSLSFLLLFLGFSFLISSTAVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPSAKP

KAG7017658.1 hypothetical protein SDJN02_19524 [Cucurbita argyrosperma subsp. argyrosperma]5.1e-2368Show/hide
Query:  MGQKSVLSL-SFLLLFLGFSFLISSTAVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPSAKP
        MGQK  LSL   LLLFLGFS L+SS AVP+TRI KSTF  PSAQDFVFQD RD ++ +GGD F         GR+VLENNDYPGTGANNHHDP +P AKP
Subjt:  MGQKSVLSL-SFLLLFLGFSFLISSTAVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPSAKP

KGN59481.1 hypothetical protein Csa_001422 [Cucumis sativus]1.8e-2369.61Show/hide
Query:  MGQKSVLSLSFLLLFLGFSFLISST---AVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPSA
        MGQK     +F LLFL FSFL+SS    AVP+TRILKSTF HPS Q  V QD RD M+I  GDSF    ERLFEGR++LENNDYPGTGANNHHDPKSP A
Subjt:  MGQKSVLSLSFLLLFLGFSFLISST---AVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPSA

Query:  KP
        KP
Subjt:  KP

TrEMBL top hitse value%identityAlignment
A0A0A0LHJ0 Uncharacterized protein8.5e-2469.61Show/hide
Query:  MGQKSVLSLSFLLLFLGFSFLISST---AVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPSA
        MGQK     +F LLFL FSFL+SS    AVP+TRILKSTF HPS Q  V QD RD M+I  GDSF    ERLFEGR++LENNDYPGTGANNHHDPKSP A
Subjt:  MGQKSVLSLSFLLLFLGFSFLISST---AVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPSA

Query:  KP
        KP
Subjt:  KP

A0A5A7UDI6 Uncharacterized protein1.8e-2166Show/hide
Query:  MGQKSVLSLSFLLLFLGFSFLISST---AVPSTRILKSTF-GHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPS
        MGQK     +F LLFL FSFL+SS+   AVP+TRILKSTF  HPS Q  V +D RD ++I  GDSF    ERLFEGR++LENNDYPGTGANNHHDPKSP+
Subjt:  MGQKSVLSLSFLLLFLGFSFLISST---AVPSTRILKSTF-GHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSPS

A0A5B6ZB32 Uncharacterized protein (Fragment)2.4e-1855.77Show/hide
Query:  LCLFPEKTNMGQKSVLSLSFLLLFLGFSFLISSTAVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHD
        LC+F    NM  K+ L L  L+LFLGF F++SS AVP++R LKS    P+AQD   Q   D M+  G    EL+EER  EGRM +E+NDYPGTGANNHHD
Subjt:  LCLFPEKTNMGQKSVLSLSFLLLFLGFSFLISSTAVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHD

Query:  PKSP
        PK+P
Subjt:  PKSP

A0A6A6KJS2 Uncharacterized protein4.5e-1757.28Show/hide
Query:  MGQKSVLSLSFLLLFLGFSFLISSTAVPSTRILKSTFGHPSA-QDFVFQDARDHMKISGGDSFELVEERLFE-------GRMVLENNDYPGTGANNHHDP
        M  K  LS+  LLLFLGFSF++SS AVPSTR LKST  +PS+ QDF+ QDA D           LVEE++ +       GRM LEN DYPGTGANNHHDP
Subjt:  MGQKSVLSLSFLLLFLGFSFLISSTAVPSTRILKSTFGHPSA-QDFVFQDARDHMKISGGDSFELVEERLFE-------GRMVLENNDYPGTGANNHHDP

Query:  KSP
        K+P
Subjt:  KSP

A0A6P3YVB6 uncharacterized protein LOC1074052462.5e-1547.47Show/hide
Query:  EKTNMGQKSVLSLSFLLLFLGFSFLISSTAVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSP
        + + M QK +L+L  +LL LGFS  + S+A+P+TR+LKST    S+   +   +   ++  G + FE+ EE  +EGRMV+EN DYPGTGANNHHDP++P
Subjt:  EKTNMGQKSVLSLSFLLLFLGFSFLISSTAVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENNDYPGTGANNHHDPKSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTCACATGGATTTTTCTTGCCAAGCTACTATCATCCTTCCCCTTTTCTGCAGATCAATTGTGTTTGTTTCCCGAGAAAACAAATATGGGTCAGAAATCTGTCCT
CTCTCTCAGCTTCCTGCTTCTCTTTCTGGGTTTCTCCTTTCTAATTTCTTCCACGGCTGTTCCCTCCACAAGAATCCTCAAATCAACTTTTGGTCACCCATCTGCCCAAG
ATTTCGTTTTTCAGGATGCAAGAGATCATATGAAGATAAGTGGTGGAGATTCATTTGAATTGGTGGAGGAAAGATTGTTTGAAGGAAGAATGGTTTTGGAGAACAATGAT
TATCCTGGCACAGGGGCAAACAATCACCATGATCCTAAGTCTCCTTCTGCAAAACCATAG
mRNA sequenceShow/hide mRNA sequence
GTTTTAATTAATTTTAGAAAGTGGTTTTTTTCTGACTTTTTTTATTGTTTATATAAATCATGTCTCTCACATGGATTTTTCTTGCCAAGCTACTATCATCCTTCCCCTTT
TCTGCAGATCAATTGTGTTTGTTTCCCGAGAAAACAAATATGGGTCAGAAATCTGTCCTCTCTCTCAGCTTCCTGCTTCTCTTTCTGGGTTTCTCCTTTCTAATTTCTTC
CACGGCTGTTCCCTCCACAAGAATCCTCAAATCAACTTTTGGTCACCCATCTGCCCAAGATTTCGTTTTTCAGGATGCAAGAGATCATATGAAGATAAGTGGTGGAGATT
CATTTGAATTGGTGGAGGAAAGATTGTTTGAAGGAAGAATGGTTTTGGAGAACAATGATTATCCTGGCACAGGGGCAAACAATCACCATGATCCTAAGTCTCCTTCTGCA
AAACCATAGTTTTCTCAAAGATCAATAACGATTTTGTTTTTAGTTTCTTTTTCTTTTTTTTTTTTTTTTTGTGTTTTAAATCTTAACTATGCATTTTGAATCTTCACAAA
ATTTTAGAAATAAAGAGGTTGTTTTTTTTTCAAATTTTAATTCTTTTTCTTTCTATAAATTTGGTTATCAATCAAACAAGAATTGAAAACATAATCGTTATTGGGGTGAT
TTGTAAACATTAAAAAAGAAAAAAAATAGGGGCAAAAAGTAAGAAGTTTATTAGACAATTGAAGGAACGAGAAAAAAAAAAAAAGCAAAGGGCAATTCTGTCTTCTTACT
TGGTTGCTTTTAGTCTCCTAATA
Protein sequenceShow/hide protein sequence
MSLTWIFLAKLLSSFPFSADQLCLFPEKTNMGQKSVLSLSFLLLFLGFSFLISSTAVPSTRILKSTFGHPSAQDFVFQDARDHMKISGGDSFELVEERLFEGRMVLENND
YPGTGANNHHDPKSPSAKP