; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021542 (gene) of Snake gourd v1 genome

Gene IDTan0021542
OrganismTrichosanthes anguina (Snake gourd v1)
Description40S ribosomal protein S26
Genome locationLG04:16285471..16288357
RNA-Seq ExpressionTan0021542
SyntenyTan0021542
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0019430 - removal of superoxide radicals (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004784 - superoxide dismutase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000892 - Ribosomal protein S26e
IPR038551 - Ribosomal protein S26e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599946.1 40S ribosomal protein S26-1, partial [Cucurbita argyrosperma subsp. sororia]8.5e-6695.56Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPK---PGQPGQQGQAPRPIGAGNPARV
        FLRRRDDQPK   PGQPGQ GQAPRP+GAGNPARV
Subjt:  FLRRRDDQPK---PGQPGQQGQAPRPIGAGNPARV

XP_004146441.1 40S ribosomal protein S26-1 [Cucumis sativus]3.0e-6393.94Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV
        F+RRR+DQ KPGQP   GQAPRP+GAGNPARV
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV

XP_022941874.1 40S ribosomal protein S26-3-like [Cucurbita moschata]2.0e-6797.73Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV
        FLRRRDDQPKPGQPGQ GQAPRP+GAGNPARV
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV

XP_022943123.1 40S ribosomal protein S26-1-like [Cucurbita moschata]4.0e-6394.7Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV
        F+RRRDDQPKPGQP   GQAPRP GAG PARV
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV

XP_022996709.1 40S ribosomal protein S26-3-like [Cucurbita maxima]7.7e-6796.97Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCA HSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV
        FLRRRDDQPKPGQPGQ GQAPRP+GAGNPARV
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV

TrEMBL top hitse value%identityAlignment
A0A0A0KM45 40S ribosomal protein S261.5e-6393.94Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV
        F+RRR+DQ KPGQP   GQAPRP+GAGNPARV
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV

A0A1S3C5M1 40S ribosomal protein S261.5e-6393.94Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV
        F+RRR+DQ KPGQP   GQAPRP+GAGNPARV
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV

A0A5A7VIJ0 40S ribosomal protein S261.5e-6393.94Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV
        F+RRR+DQ KPGQP   GQAPRP+GAGNPARV
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV

A0A6J1FPQ0 40S ribosomal protein S269.8e-6897.73Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV
        FLRRRDDQPKPGQPGQ GQAPRP+GAGNPARV
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV

A0A6J1K9H1 40S ribosomal protein S263.7e-6796.97Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCA HSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV
        FLRRRDDQPKPGQPGQ GQAPRP+GAGNPARV
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPARV

SwissProt top hitse value%identityAlignment
O45499 40S ribosomal protein S263.0e-3765.85Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y QY LPKLY K+ YC++CAIHS VVR RSR  RR+R PP R
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRP
        F  +R    +PG PG     PRP
Subjt:  FLRRRDDQPKPGQPGQQGQAPRP

P49206 40S ribosomal protein S26-11.1e-5280.77Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA
        F RR++D PKPGQP   GQAPRP G G  A
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA

P49216 40S ribosomal protein S265.8e-4975.38Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR+R+PP+R
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA
        F RRR+D+P+  +PG  G AP P GA  PA
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA

Q8LPJ7 40S ribosomal protein S26-21.1e-5280.77Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA
        F RR++D PKPGQP   GQAPRP G G  A
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA

Q9LYK9 40S ribosomal protein S26-33.3e-5281.54Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA
        F RR++D PKP QP   GQAPRP G G PA
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA

Arabidopsis top hitse value%identityAlignment
AT2G40510.1 Ribosomal protein S26e family protein8.0e-5480.77Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA
        F RR++D PKPGQP   GQAPRP G G  A
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA

AT2G40590.1 Ribosomal protein S26e family protein8.0e-5480.77Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA
        F RR++D PKPGQP   GQAPRP G G  A
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA

AT3G56340.1 Ribosomal protein S26e family protein2.3e-5381.54Show/hide
Query:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA
        F RR++D PKP QP   GQAPRP G G PA
Subjt:  FLRRRDDQPKPGQPGQQGQAPRPIGAGNPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTCAAGCGGAGGAACAGCGGACGTAACAAGCACGGCCGTGGACACGTTAAGTTCATCCGGTGCTCCAACTGCGGCAAGTGCTGCCCCAAGGATAAAGCTATTAA
GAGGTTTCTCGTGAGGAATATTGTGGAGCAGGCTGCTGTTAGGGATGTTCAAGAAGCCTGTGTCTATGACCAATATACTCTCCCTAAGCTTTATGCTAAGATGCAGTACT
GTGTTTCCTGTGCTATTCACTCACATGTTGTGAGAGTTCGATCTCGTACTGATAGAAGAAATCGGCAACCGCCACAGCGCTTCCTCAGACGCAGGGATGATCAGCCAAAG
CCAGGTCAGCCAGGCCAGCAAGGCCAAGCGCCTCGTCCTATTGGAGCTGGAAATCCTGCTCGTGTATAA
mRNA sequenceShow/hide mRNA sequence
AAATTTCATAAGATGAGATTGATCGATAAAATTGAAATTTTGGAGGTCTCATTGTACTAGTTTAGGGTGATTTTTGCAATTTTCTTTTTTTTCTTTGTTGGTTGGGCTCA
GCGGGACCGGAGATATATATAAAGCGTTTACCGGTACAAATCTCCGAATCTCACACACAACATTTGCCTACAAAAACCCTAATCGGCTGCTTCTTCTTCTCTCTCTCTGC
TTCGAGATCTAAAGCTTTGAAACAATGACTTTCAAGCGGAGGAACAGCGGACGTAACAAGCACGGCCGTGGACACGTTAAGTTCATCCGGTGCTCCAACTGCGGCAAGTG
CTGCCCCAAGGATAAAGCTATTAAGAGGTTTCTCGTGAGGAATATTGTGGAGCAGGCTGCTGTTAGGGATGTTCAAGAAGCCTGTGTCTATGACCAATATACTCTCCCTA
AGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATTCACTCACATGTTGTGAGAGTTCGATCTCGTACTGATAGAAGAAATCGGCAACCGCCACAGCGCTTCCTC
AGACGCAGGGATGATCAGCCAAAGCCAGGTCAGCCAGGCCAGCAAGGCCAAGCGCCTCGTCCTATTGGAGCTGGAAATCCTGCTCGTGTATAAAGAAACCTTTTTATGGC
TTCTACGAGCAATTCGTAGGGATCTTTTTATAGTCAGTCTATTATAGTTCAGTTGTTTCTCTTGTGGATGAAAGTGGATTTTAGAATCAATATGGAAACTTTACTGACAA
TTTTGCAACTTTGAAGGAGCTAAAGACCACGTTTATTGAGTTATTTAATGGTATTTCTTTTCAGTTTCTTGTT
Protein sequenceShow/hide protein sequence
MTFKRRNSGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFLRRRDDQPK
PGQPGQQGQAPRPIGAGNPARV