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Tan0021546 (gene) of Snake gourd v1 genome

Gene IDTan0021546
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPlant transposase
Genome locationLG04:32631811..32632278
RNA-Seq ExpressionTan0021546
SyntenyTan0021546
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060466.1 Plant transposase [Cucumis melo var. makuwa]2.4e-3556.52Show/hide
Query:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA
        EGD++T+KL VDQSQD  P A  E  N VDN D+TH T                +L S GQ    ++RS +V   I+ SE  ++   KK RGPTKMK IA
Subjt:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA

Query:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV
        +EE  KVDITF+++GQPIGE S+G+SSFLG+LVRE+VPVTL DWRKLSTR KEILWTSIQ+
Subjt:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV

XP_016901232.1 PREDICTED: uncharacterized protein LOC103493280 isoform X1 [Cucumis melo]2.4e-3556.52Show/hide
Query:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA
        EGD++T+KL VDQSQD  P A  E  N VDN D+TH T                +L S GQ    ++RS +V   I+ SE  ++   KK RGPTKMK IA
Subjt:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA

Query:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV
        +EE  KVDITF+++GQPIGE S+G+SSFLG+LVRE+VPVTL DWRKLSTR KEILWTSIQ+
Subjt:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV

XP_016901236.1 PREDICTED: uncharacterized protein LOC103493280 isoform X3 [Cucumis melo]2.4e-3556.52Show/hide
Query:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA
        EGD++T+KL VDQSQD  P A  E  N VDN D+TH T                +L S GQ    ++RS +V   I+ SE  ++   KK RGPTKMK IA
Subjt:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA

Query:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV
        +EE  KVDITF+++GQPIGE S+G+SSFLG+LVRE+VPVTL DWRKLSTR KEILWTSIQ+
Subjt:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV

XP_016901238.1 PREDICTED: uncharacterized protein LOC103493280 isoform X5 [Cucumis melo]2.4e-3556.52Show/hide
Query:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA
        EGD++T+KL VDQSQD  P A  E  N VDN D+TH T                +L S GQ    ++RS +V   I+ SE  ++   KK RGPTKMK IA
Subjt:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA

Query:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV
        +EE  KVDITF+++GQPIGE S+G+SSFLG+LVRE+VPVTL DWRKLSTR KEILWTSIQ+
Subjt:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV

XP_016901239.1 PREDICTED: uncharacterized protein LOC103493280 isoform X6 [Cucumis melo]2.4e-3556.52Show/hide
Query:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA
        EGD++T+KL VDQSQD  P A  E  N VDN D+TH T                +L S GQ    ++RS +V   I+ SE  ++   KK RGPTKMK IA
Subjt:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA

Query:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV
        +EE  KVDITF+++GQPIGE S+G+SSFLG+LVRE+VPVTL DWRKLSTR KEILWTSIQ+
Subjt:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV

TrEMBL top hitse value%identityAlignment
A0A1S4DZ18 uncharacterized protein LOC103493280 isoform X31.2e-3556.52Show/hide
Query:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA
        EGD++T+KL VDQSQD  P A  E  N VDN D+TH T                +L S GQ    ++RS +V   I+ SE  ++   KK RGPTKMK IA
Subjt:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA

Query:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV
        +EE  KVDITF+++GQPIGE S+G+SSFLG+LVRE+VPVTL DWRKLSTR KEILWTSIQ+
Subjt:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV

A0A1S4DZ32 uncharacterized protein LOC103493280 isoform X61.2e-3556.52Show/hide
Query:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA
        EGD++T+KL VDQSQD  P A  E  N VDN D+TH T                +L S GQ    ++RS +V   I+ SE  ++   KK RGPTKMK IA
Subjt:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA

Query:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV
        +EE  KVDITF+++GQPIGE S+G+SSFLG+LVRE+VPVTL DWRKLSTR KEILWTSIQ+
Subjt:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV

A0A1S4DZ36 uncharacterized protein LOC103493280 isoform X11.2e-3556.52Show/hide
Query:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA
        EGD++T+KL VDQSQD  P A  E  N VDN D+TH T                +L S GQ    ++RS +V   I+ SE  ++   KK RGPTKMK IA
Subjt:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA

Query:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV
        +EE  KVDITF+++GQPIGE S+G+SSFLG+LVRE+VPVTL DWRKLSTR KEILWTSIQ+
Subjt:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV

A0A1S4DZ41 uncharacterized protein LOC103493280 isoform X51.2e-3556.52Show/hide
Query:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA
        EGD++T+KL VDQSQD  P A  E  N VDN D+TH T                +L S GQ    ++RS +V   I+ SE  ++   KK RGPTKMK IA
Subjt:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA

Query:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV
        +EE  KVDITF+++GQPIGE S+G+SSFLG+LVRE+VPVTL DWRKLSTR KEILWTSIQ+
Subjt:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV

A0A5D3D4T6 Plant transposase1.2e-3556.52Show/hide
Query:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA
        EGD++T+KL VDQSQD  P A  E  N VDN D+TH T                +L S GQ    ++RS +V   I+ SE  ++   KK RGPTKMK IA
Subjt:  EGDHVTDKLCVDQSQDYSP-AEEESLNDVDNCDTTHMTQ---------------RLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIA

Query:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV
        +EE  KVDITF+++GQPIGE S+G+SSFLG+LVRE+VPVTL DWRKLSTR KEILWTSIQ+
Subjt:  VEEQRKVDITFNEYGQPIGEDSVGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGATAAGGAAGGAGATCACGTTACTGATAAGTTGTGTGTTGACCAATCTCAAGATTACTCACCAGCTGAGGAAGAGTCATTGAATGATGTAGATAATTGTGATAC
TACACACATGACTCAAAGGTTAGATTCTATCGGTCAAGCTCCCCTAAACGTAGAAAGATCTTCGGATGTAGAAGTCAATATTGATGCATCTGAACAAATTTTAAAACATT
CCTCCAAGAAATGTAGAGGACCTACAAAAATGAAAGTTATTGCAGTTGAGGAACAGAGAAAAGTAGATATAACATTCAATGAATATGGACAACCGATTGGAGAGGATTCA
GTTGGGGTGTCTTCATTTTTGGGTTCACTCGTGAGAGAGGTAGTGCCTGTGACTTTACAAGATTGGAGGAAATTGTCTACACGATGGAAGGAAATTTTATGGACTTCAAT
TCAAGTATGTATTTCATATTTTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGATAAGGAAGGAGATCACGTTACTGATAAGTTGTGTGTTGACCAATCTCAAGATTACTCACCAGCTGAGGAAGAGTCATTGAATGATGTAGATAATTGTGATAC
TACACACATGACTCAAAGGTTAGATTCTATCGGTCAAGCTCCCCTAAACGTAGAAAGATCTTCGGATGTAGAAGTCAATATTGATGCATCTGAACAAATTTTAAAACATT
CCTCCAAGAAATGTAGAGGACCTACAAAAATGAAAGTTATTGCAGTTGAGGAACAGAGAAAAGTAGATATAACATTCAATGAATATGGACAACCGATTGGAGAGGATTCA
GTTGGGGTGTCTTCATTTTTGGGTTCACTCGTGAGAGAGGTAGTGCCTGTGACTTTACAAGATTGGAGGAAATTGTCTACACGATGGAAGGAAATTTTATGGACTTCAAT
TCAAGTATGTATTTCATATTTTGATTGA
Protein sequenceShow/hide protein sequence
MCDKEGDHVTDKLCVDQSQDYSPAEEESLNDVDNCDTTHMTQRLDSIGQAPLNVERSSDVEVNIDASEQILKHSSKKCRGPTKMKVIAVEEQRKVDITFNEYGQPIGEDS
VGVSSFLGSLVREVVPVTLQDWRKLSTRWKEILWTSIQVCISYFD