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Tan0021547 (gene) of Snake gourd v1 genome

Gene IDTan0021547
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionS-protein homolog
Genome locationLG10:4795326..4795754
RNA-Seq ExpressionTan0021547
SyntenyTan0021547
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018836.1 Self-incompatibility protein S1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-7292.96Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKIL+SILMLI FPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWC+S+D DIGGRALQEHDDFSWPV+TNFWITTTSQFSCTVKLDRTRKSF
Subjt:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  YAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW
         AFKVPRDIYRCSA RKC+WLV+EDGFYFSDDEVNWKKDFSW
Subjt:  YAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW

TYK17379.1 self-incompatibility family protein [Cucumis melo var. makuwa]5.0e-7293.66Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKIL+SILMLIFFPFFTVF+SLLP EQL+GIEYEVRVINGFTNNSSLPLVIWC+S+D DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
Subjt:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  YAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW
         AFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  YAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_004134017.2 S-protein homolog 6 [Cucumis sativus]1.2e-7093.01Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFFTVF+SLLP EQL+GIEYEVRVINGFTNNSSLPLVIWC+S+D DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKS
Subjt:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS

Query:  FYAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW
        F AFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FYAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_022949667.1 S-protein homolog 5 [Cucurbita moschata]3.8e-7294.37Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKILISILMLIFFPFFTVFMSLLPP+ LYGIEYEVRVINGFTNNSSLPLVIWC+S+DSDIGGRALQEHDDFSW VKTNFWITTTSQFSCTVKLDRTR+SF
Subjt:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  YAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW
         AFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKK+FSW
Subjt:  YAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_038876719.1 S-protein homolog 6-like [Benincasa hispida]3.8e-7294.37Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKILISILMLIFFPFF+VF+SLLP EQL+GIEYEVRVINGFTNNSSLPLVIWC+S+DSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
Subjt:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  YAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW
         AFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  YAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW

TrEMBL top hitse value%identityAlignment
A0A0A0L6V3 S-protein homolog3.6e-6094.07Show/hide
Query:  EQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFYAFKVPRDIYRCSAFRKCSWLVME
        EQL+GIEYEVRVINGFTNNSSLPLVIWC+S+D DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKSF AFKVPRDIYRCSA RKCSWLVME
Subjt:  EQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFYAFKVPRDIYRCSAFRKCSWLVME

Query:  DGFYFSDDEVNWKKDFSW
        DGFYFSDDEVNWKKDFSW
Subjt:  DGFYFSDDEVNWKKDFSW

A0A1S4DSD2 S-protein homolog6.0e-7193.01Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFFTVF+SLLP EQL+GIEYEVRVINGFTNNSSLPLVIWC+S+D DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKS
Subjt:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS

Query:  FYAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW
        F AFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FYAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5A7U6C9 S-protein homolog6.0e-7193.01Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFFTVF+SLLP EQL+GIEYEVRVINGFTNNSSLPLVIWC+S+D DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKS
Subjt:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS

Query:  FYAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW
        F AFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FYAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5D3D3G0 S-protein homolog2.4e-7293.66Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKIL+SILMLIFFPFFTVF+SLLP EQL+GIEYEVRVINGFTNNSSLPLVIWC+S+D DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
Subjt:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  YAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW
         AFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  YAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A6J1GCS3 S-protein homolog1.9e-7294.37Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKILISILMLIFFPFFTVFMSLLPP+ LYGIEYEVRVINGFTNNSSLPLVIWC+S+DSDIGGRALQEHDDFSW VKTNFWITTTSQFSCTVKLDRTR+SF
Subjt:  MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  YAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW
         AFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKK+FSW
Subjt:  YAFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24060.1 Plant self-incompatibility protein S1 family7.8e-3953.9Show/hide
Query:  ILISILMLIFFPFFTVFMSLLPPEQLY-GIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFY
        I++ + MLI      +F  +L P+ ++ G E++VRVIN F +NSSLPLVIWC+S   D+GGRALQE DDF W  K + W +  ++++CT+K D  RK F 
Subjt:  ILISILMLIFFPFFTVFMSLLPPEQLY-GIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFY

Query:  AFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW
        AFKV RD  RC + +KCSW V EDGFYFS DEV W KDFSW
Subjt:  AFKVPRDIYRCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCCTCATTAGCATTCTGATGCTCATTTTCTTCCCGTTCTTCACTGTTTTCATGTCATTATTACCTCCAGAGCAACTGTATGGCATTGAATACGAAGTCCGTGT
GATCAATGGCTTCACAAACAACTCCTCACTGCCTCTCGTGATATGGTGCTCGTCCGAAGACAGTGATATTGGCGGGCGGGCGCTCCAGGAGCATGATGATTTCAGCTGGC
CCGTCAAGACCAACTTCTGGATTACTACAACCTCTCAATTCTCTTGCACTGTCAAATTGGACCGTACAAGGAAGAGTTTTTATGCGTTTAAGGTACCAAGAGATATCTAC
CGCTGTAGTGCTTTCAGGAAATGCTCTTGGTTGGTTATGGAAGATGGATTTTATTTCAGCGATGATGAAGTAAACTGGAAGAAGGATTTCTCGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATCCTCATTAGCATTCTGATGCTCATTTTCTTCCCGTTCTTCACTGTTTTCATGTCATTATTACCTCCAGAGCAACTGTATGGCATTGAATACGAAGTCCGTGT
GATCAATGGCTTCACAAACAACTCCTCACTGCCTCTCGTGATATGGTGCTCGTCCGAAGACAGTGATATTGGCGGGCGGGCGCTCCAGGAGCATGATGATTTCAGCTGGC
CCGTCAAGACCAACTTCTGGATTACTACAACCTCTCAATTCTCTTGCACTGTCAAATTGGACCGTACAAGGAAGAGTTTTTATGCGTTTAAGGTACCAAGAGATATCTAC
CGCTGTAGTGCTTTCAGGAAATGCTCTTGGTTGGTTATGGAAGATGGATTTTATTTCAGCGATGATGAAGTAAACTGGAAGAAGGATTTCTCGTGGTAA
Protein sequenceShow/hide protein sequence
MKILISILMLIFFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCSSEDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFYAFKVPRDIY
RCSAFRKCSWLVMEDGFYFSDDEVNWKKDFSW