CuGenDBv2

Gene ID	Tan0021550
Organism	Trichosanthes anguina (Snake gourd v1)
Description	cyclic phosphodiesterase-like
Genome location	LG03:79248559..79250017
RNA-Seq Expression	Tan0021550
Synteny	Tan0021550
Gene Ontology terms	GO:0009187 - cyclic nucleotide metabolic process (biological process) GO:0004113 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (molecular function)
InterPro domains	IPR009097 - Cyclic phosphodiesterase IPR012386 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581386.1 Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia]

8.8e-96

88.54

Show/hide

Query:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL
        MANPES PIQPSEGEKNVYS+WALPPEDV  +I+TLMNSLRSEFGGPQFEPHIT+VGAI LT DDALNKFRSACEGLKAYQATVD VSTGTFFYQCVFLL
Subjt:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS
        IHPTT+VV+ SSHCC HFGY NSTPYMPHLSLLYANISDE+KKQAKE+A+KLDEA+NGL+FP+TRLALYKTDTGDETLKSWEKIAE DLPSS
Subjt:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS

XP_022978766.1 cyclic phosphodiesterase-like [Cucurbita maxima]

1.5e-95

89.06

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Query:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL
        MANPES  IQPSEGEKNVYS+WALPPEDV  +I+TLMNSLRSEFGGPQFEPHIT+VGAI LT DDALNKFRSACEGLKAYQATVD VSTGTFFYQCVFLL
Subjt:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS
        IHPTT+VV+ SSHCC HFGYKNSTPYMPHLSLLYANISDE+KKQAKE+A+KLDEA+NGL+FPVTRLALYKTDTGDETLKSWEKIAE DLPSS
Subjt:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS

XP_023522563.1 cyclic phosphodiesterase-like [Cucurbita pepo subsp. pepo]

3.9e-96

89.06

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Query:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL
        MANPES PIQPSEGEKNVYS+WALPPEDV  +I+TLMNSLRSEFGGPQFEPHIT+VGAI LT DDALNKFRSACEGLKAYQATVD VSTGTFFYQCVFLL
Subjt:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS
        IHPT EVV+ SSHCC HFGYKNSTPYMPHLSLLYANISDE+KKQAKE+A+KLDEA+NGL+FP+TRLALYKTDTGDETLKSWEKIAE DLPSS
Subjt:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS

XP_023543945.1 cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo]

1.8e-96

89.06

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Query:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL
        MANPES PIQPSEGEKNVYS+WALPPEDV  +I+TLMNSLRSEFGGPQFEPHIT+VGAI LT DDALNKFRSACEGLKAYQATVD VSTGTFFYQCVFLL
Subjt:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS
        IHPTT+VV+ SSHCC HFGYKNSTPYMPHLSLLYANISDE+KKQAKE+A+KLDEA+NGL+FP+TRLALYKTDTGDETLKSWEKIAE DLPSS
Subjt:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS

XP_038882567.1 cyclic phosphodiesterase-like [Benincasa hispida]

1.1e-95

89.06

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Query:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL
        MANPESA IQPSE E NVYS+WALPPEDV  +IK LMNSLRSEFGGPQFEPHIT+VGAI LTPDDALNKFRSAC+GLKAYQATVDHVSTGTFFYQCVFLL
Subjt:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS
        IH TTEVV+ SSHCC HFGYKNSTPYMPH+SLLYANISDEKKKQAK IADKLDEAVNGL FP+TRLALYKTDT DETLKSWEKIAEH+LPSS
Subjt:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AYZ1 cyclic phosphodiesterase-like

1.3e-89

83.33

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Query:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL
        M NPESA IQ SE E NVYS+WALPPEDV+ +I+ LMNSLRSEFGGPQFEPHIT+VGAI LT +DALNKF +AC+G+KAYQATVDHVSTGTFFYQCVFLL
Subjt:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS
        IHPTTEVV+ SSH C+HFG+KNSTPYMPH+SLLYA+ISDEKKKQAKEIADKLDEAVNGL FP+TRLAL+KTDT DETLKSWEKI EHDL SS
Subjt:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS

A0A6J1EEQ8 cyclic phosphodiesterase-like

1.6e-90

86.46

Show/hide

Query:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL
        MANP SAPI+P EGE  +YS+WALPPEDVATKI +LM+SLRSEFGGP+FEPHIT+VGAI LTP DALNKFRSACEG+KAYQATVD VS GT FYQCVFLL
Subjt:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS
        IHPTTEVVQ SSHCC HFGY NSTPYMPHLSLLYANISDE KK+AKEIADKL+EAVNGL  PVTRLALYKTDTGDETLKSWEKIAEHDLPSS
Subjt:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS

A0A6J1EGC1 cyclic phosphodiesterase-like

8.0e-95

88.54

Show/hide

Query:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL
        MANPES PIQPSEGEKNVYS+WALPPEDV  +I+TLMNSLRSEFGGPQFEPHIT+VGAI LT DDALNKFRSACEGLKAYQATVD VSTGTFFYQCVFLL
Subjt:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS
        IHPTT+VV+ SSHCC HFGYKN TPYMPHLSLLYANISDE+KKQAKE+A+KLDEA+NGL+FP+TRLALYKTDTGDETLKSWEKIAE DLPSS
Subjt:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS

A0A6J1INY2 cyclic phosphodiesterase-like

7.3e-96

89.06

Show/hide

Query:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL
        MANPES  IQPSEGEKNVYS+WALPPEDV  +I+TLMNSLRSEFGGPQFEPHIT+VGAI LT DDALNKFRSACEGLKAYQATVD VSTGTFFYQCVFLL
Subjt:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS
        IHPTT+VV+ SSHCC HFGYKNSTPYMPHLSLLYANISDE+KKQAKE+A+KLDEA+NGL+FPVTRLALYKTDTGDETLKSWEKIAE DLPSS
Subjt:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS

A0A6J1KNB2 cyclic phosphodiesterase-like

3.9e-89

85.42

Show/hide

Query:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL
        MANP SAPI+P EGE  +YS+WALPPEDVATKI +LM+SLRSEFGGP+FEPHIT+VGAI LTP DALNKFRSACEG+KAYQATVD VS GT FYQCVFLL
Subjt:  MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS
        IHPTTEVVQ SSHCC HFG  NSTPYMPHLSLLYANISDE KK+AKEIADKL+EAVNGL  P+TRLALYKTDTGDETLKSWEKIAEHDLPSS
Subjt:  IHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS

SwissProt top hits

e value

%identity

Alignment

O04147 Cyclic phosphodiesterase

3.9e-54

57.23

Show/hide

Query:  EGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVQASS
        E +K+VYS+WALP E+   + K LM +LRSEF GP+F PH+T+  +  LT D+A   F SAC+GLKAY ATVD VSTGTFF+QCVFLL+  T EV++A  
Subjt:  EGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVQASS

Query:  HCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIA
        HC  HF    +TPYMPHLSLLYA +++E+KK A+E A  LD +++GL+F + RLAL KTDT D+TL++WE +A
Subjt:  HCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIA

Arabidopsis top hits

e value

%identity

Alignment

AT4G18930.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

2.8e-55

57.23

Show/hide

Query:  EGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVQASS
        E +K+VYS+WALP E+   + K LM +LRSEF GP+F PH+T+  +  LT D+A   F SAC+GLKAY ATVD VSTGTFF+QCVFLL+  T EV++A  
Subjt:  EGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVQASS

Query:  HCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIA
        HC  HF    +TPYMPHLSLLYA +++E+KK A+E A  LD +++GL+F + RLAL KTDT D+TL++WE +A
Subjt:  HCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIA

AT4G18940.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

7.5e-45

44.22

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Query:  MANPESAPIQP------SEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIP--LTPDDALNKFRSACEGLKAYQATVDHVSTGTF
        M    + P+QP       E EK +Y++WA+P +DV  +++ LM  LRSEFGGP F+PH+TLVG  P  LT  +A   F+SACEG K Y ATVD VS GT 
Subjt:  MANPESAPIQP------SEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIP--LTPDDALNKFRSACEGLKAYQATVDHVSTGTF

Query:  FYQCVFLLIHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPS
        ++QC+++ +  T EV+ A+ H   HF       Y+PH+S+LY ++++ +KK+A E A  LD +++GLNF + R+AL+ TD     + SW K+ EH L S
Subjt:  FYQCVFLLIHPTTEVVQASSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGAACCCAGAATCCGCCCCTATCCAACCCTCTGAGGGGGAGAAGAACGTGTATTCCATGTGGGCTCTTCCTCCAGAAGATGTGGCCACCAAAATCAAGACTCTCAT
GAACAGCCTTAGATCCGAGTTCGGCGGCCCCCAATTCGAGCCTCATATCACCCTCGTTGGGGCAATTCCTCTCACCCCTGATGATGCCCTCAATAAATTCCGATCGGCTT
GCGAAGGGCTTAAGGCTTATCAAGCCACCGTCGATCATGTCTCTACCGGAACCTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCACCGAGGTGGTGCAGGCT
AGTTCACATTGTTGCGAACATTTTGGTTACAAGAACTCAACCCCTTACATGCCGCATTTGAGCCTACTGTATGCCAACATTTCAGATGAGAAAAAGAAGCAGGCAAAAGA
AATAGCAGACAAACTCGATGAAGCCGTGAATGGCCTGAACTTCCCAGTCACTCGACTTGCACTGTATAAAACAGACACTGGGGATGAAACTCTAAAGTCCTGGGAGAAAA
TTGCAGAACACGATCTTCCTTCAAGTTAG

mRNA sequence

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Protein sequence

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MANPESAPIQPSEGEKNVYSMWALPPEDVATKIKTLMNSLRSEFGGPQFEPHITLVGAIPLTPDDALNKFRSACEGLKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVQA
SSHCCEHFGYKNSTPYMPHLSLLYANISDEKKKQAKEIADKLDEAVNGLNFPVTRLALYKTDTGDETLKSWEKIAEHDLPSS

Tan0021550 (gene) of Snake gourd v1 genome