; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021552 (gene) of Snake gourd v1 genome

Gene IDTan0021552
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationLG04:56992274..56992959
RNA-Seq ExpressionTan0021552
SyntenyTan0021552
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]8.9e-0860.32Show/hide
Query:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL
        F+ AR  S  H+SDVTK+RA+L+YAIV  K+IDVGKVIS  I H  R T   G+G  SLITAL
Subjt:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL

KAA0033353.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]2.2e-1434.76Show/hide
Query:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL-------FHEPEFFLDA--------VEGVMG------
        FICA+   VAH S VTKERAILLYAI T +++DVGKVI + + ++++  +TGGLGH SLITAL       ++E E  +D         + G+ G      
Subjt:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL-------FHEPEFFLDA--------VEGVMG------

Query:  ------------------EERQHESPQ-----RPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIH--GADPSFPGP
                          +   H+ P       P  +  Q L   + R  Q     + Q +R ERR+  + + SE    HLY CL  +H  G    FP  
Subjt:  ------------------EERQHESPQ-----RPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIH--GADPSFPGP

Query:  MPPYTSSDEE
        M PY SSD++
Subjt:  MPPYTSSDEE

KGN46897.1 hypothetical protein Csa_020731 [Cucumis sativus]2.8e-1433.81Show/hide
Query:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL-------FHEPEFFLD---------------------
        FICA+   VAH S VTKERAILLYAI T +++DVGKVI + + ++++  +TGGLGH SLITAL       ++E E  +D                     
Subjt:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL-------FHEPEFFLD---------------------

Query:  ----------------AVEGVMGEERQHESPQRPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIH--GADPSFPGP
                          +    +E   +    P  +  Q L   + R  Q     + Q RR ERR+  + + SE    HLY CL  +H  G    FP  
Subjt:  ----------------AVEGVMGEERQHESPQRPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIH--GADPSFPGP

Query:  MPPYTSSDEE
        M PY SSD++
Subjt:  MPPYTSSDEE

PON97548.1 hypothetical protein TorRG33x02_067500 [Trema orientale]3.4e-0731.72Show/hide
Query:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITALFHEPEFFL--DAVEGVMGEERQHESPQRPAPQEYQDL
        FI  +F   +  S+VT ERAIL YAI+ G +IDVGK+I   I H+ +GTI GGL H SLI  L  + +     DA   V  E+  H  P   A     DL
Subjt:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITALFHEPEFFL--DAVEGVMGEERQHESPQRPAPQEYQDL

Query:  --------------VQAMARLEQWFD--QHETQ--SRREERRIMRHLQYSEASHRHLYDCLRHIHGADPSFPGP--MPPYTSSDEE
                       Q+++  +QW +  QH+    +  +E+     LQ+++A  +   +C  +       FP P   PP+  +  E
Subjt:  --------------VQAMARLEQWFD--QHETQ--SRREERRIMRHLQYSEASHRHLYDCLRHIHGADPSFPGP--MPPYTSSDEE

XP_008458668.1 PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo]2.2e-1434.76Show/hide
Query:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL-------FHEPEFFLDA--------VEGVMG------
        FICA+   VAH S VTKERAILLYAI T +++DVGKVI + + ++++  +TGGLGH SLITAL       ++E E  +D         + G+ G      
Subjt:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL-------FHEPEFFLDA--------VEGVMG------

Query:  ------------------EERQHESPQ-----RPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIH--GADPSFPGP
                          +   H+ P       P  +  Q L   + R  Q     + Q +R ERR+  + + SE    HLY CL  +H  G    FP  
Subjt:  ------------------EERQHESPQ-----RPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIH--GADPSFPGP

Query:  MPPYTSSDEE
        M PY SSD++
Subjt:  MPPYTSSDEE

TrEMBL top hitse value%identityAlignment
A0A061F2U9 Uncharacterized protein4.3e-0860.32Show/hide
Query:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL
        F+ AR  S  H+SDVTK+RA+L+YAIV  K+IDVGKVIS  I H  R T   G+G  SLITAL
Subjt:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL

A0A0A0KER1 Uncharacterized protein1.4e-1433.81Show/hide
Query:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL-------FHEPEFFLD---------------------
        FICA+   VAH S VTKERAILLYAI T +++DVGKVI + + ++++  +TGGLGH SLITAL       ++E E  +D                     
Subjt:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL-------FHEPEFFLD---------------------

Query:  ----------------AVEGVMGEERQHESPQRPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIH--GADPSFPGP
                          +    +E   +    P  +  Q L   + R  Q     + Q RR ERR+  + + SE    HLY CL  +H  G    FP  
Subjt:  ----------------AVEGVMGEERQHESPQRPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIH--GADPSFPGP

Query:  MPPYTSSDEE
        M PY SSD++
Subjt:  MPPYTSSDEE

A0A0A0KNI1 AA_kinase domain-containing protein5.1e-0947.56Show/hide
Query:  VAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITALFHEPEFFLDAVEGVMGEERQHESPQRP
        +AH S VTKERAILLYAI T +++DVGKVI + + ++++  +TGGLGH SLITAL           EGV+  E++     +P
Subjt:  VAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITALFHEPEFFLDAVEGVMGEERQHESPQRP

A0A1S3C7Y0 uncharacterized protein LOC1034979961.1e-1434.76Show/hide
Query:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL-------FHEPEFFLDA--------VEGVMG------
        FICA+   VAH S VTKERAILLYAI T +++DVGKVI + + ++++  +TGGLGH SLITAL       ++E E  +D         + G+ G      
Subjt:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL-------FHEPEFFLDA--------VEGVMG------

Query:  ------------------EERQHESPQ-----RPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIH--GADPSFPGP
                          +   H+ P       P  +  Q L   + R  Q     + Q +R ERR+  + + SE    HLY CL  +H  G    FP  
Subjt:  ------------------EERQHESPQ-----RPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIH--GADPSFPGP

Query:  MPPYTSSDEE
        M PY SSD++
Subjt:  MPPYTSSDEE

A0A5D3BBY3 Putative S-locus lectin protein kinase family protein1.1e-1434.76Show/hide
Query:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL-------FHEPEFFLDA--------VEGVMG------
        FICA+   VAH S VTKERAILLYAI T +++DVGKVI + + ++++  +TGGLGH SLITAL       ++E E  +D         + G+ G      
Subjt:  FICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITAL-------FHEPEFFLDA--------VEGVMG------

Query:  ------------------EERQHESPQ-----RPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIH--GADPSFPGP
                          +   H+ P       P  +  Q L   + R  Q     + Q +R ERR+  + + SE    HLY CL  +H  G    FP  
Subjt:  ------------------EERQHESPQ-----RPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIH--GADPSFPGP

Query:  MPPYTSSDEE
        M PY SSD++
Subjt:  MPPYTSSDEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAACAAGAGAGGCGAGGTCTCCAAACTCGGACGGCGGACCTCACCGTGTCAGCTAGAGAGTGTGCGCGATTTTATCTGTGCTAGATTCCGATCGGTTGCACACAT
GAGTGACGTGACGAAGGAGCGCGCCATCCTCTTGTACGCCATTGTCACTGGCAAGACGATTGATGTAGGCAAAGTCATCAGTCGATACATCAGGCACGTGCAGCGAGGCA
CGATCACGGGCGGACTAGGCCATCTCTCTCTCATCACCGCCCTCTTTCACGAGCCAGAATTTTTCCTTGACGCAGTCGAGGGTGTGATGGGAGAGGAGAGGCAGCATGAG
TCACCACAGCGCCCTGCCCCACAGGAGTACCAGGATCTGGTTCAAGCCATGGCTAGACTCGAGCAGTGGTTCGACCAGCATGAGACTCAGAGTCGTAGGGAGGAGCGCCG
GATCATGAGACATCTGCAGTACAGTGAGGCCTCTCACCGCCATCTTTATGACTGTCTCCGACACATTCATGGTGCAGATCCTTCATTCCCGGGCCCTATGCCTCCCTACA
CCTCTTCTGATGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAACAAGAGAGGCGAGGTCTCCAAACTCGGACGGCGGACCTCACCGTGTCAGCTAGAGAGTGTGCGCGATTTTATCTGTGCTAGATTCCGATCGGTTGCACACAT
GAGTGACGTGACGAAGGAGCGCGCCATCCTCTTGTACGCCATTGTCACTGGCAAGACGATTGATGTAGGCAAAGTCATCAGTCGATACATCAGGCACGTGCAGCGAGGCA
CGATCACGGGCGGACTAGGCCATCTCTCTCTCATCACCGCCCTCTTTCACGAGCCAGAATTTTTCCTTGACGCAGTCGAGGGTGTGATGGGAGAGGAGAGGCAGCATGAG
TCACCACAGCGCCCTGCCCCACAGGAGTACCAGGATCTGGTTCAAGCCATGGCTAGACTCGAGCAGTGGTTCGACCAGCATGAGACTCAGAGTCGTAGGGAGGAGCGCCG
GATCATGAGACATCTGCAGTACAGTGAGGCCTCTCACCGCCATCTTTATGACTGTCTCCGACACATTCATGGTGCAGATCCTTCATTCCCGGGCCCTATGCCTCCCTACA
CCTCTTCTGATGAGGAATGA
Protein sequenceShow/hide protein sequence
MGNKRGEVSKLGRRTSPCQLESVRDFICARFRSVAHMSDVTKERAILLYAIVTGKTIDVGKVISRYIRHVQRGTITGGLGHLSLITALFHEPEFFLDAVEGVMGEERQHE
SPQRPAPQEYQDLVQAMARLEQWFDQHETQSRREERRIMRHLQYSEASHRHLYDCLRHIHGADPSFPGPMPPYTSSDEE