; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021556 (gene) of Snake gourd v1 genome

Gene IDTan0021556
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG05:11330404..11331394
RNA-Seq ExpressionTan0021556
SyntenyTan0021556
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604931.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia]2.1e-9363.57Show/hide
Query:  RECSLIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNP
        R    I+EVWASN   EI +L+ CL++N ILSIDTEFPG IRSTPWGSID+ VYEDLRFNVNQTKLIQ+GLT SD+SG V GSWEFNFSDFD ++D  NP
Subjt:  RECSLIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNP

Query:  SSISFLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKL
        SSISFL+QNGLDF K+KK GIPL LF+     ++ ++++ +WVTFHGLYDIGY   A+G+ +ELPES++EF E+V+  +GVVRDLK +AR+CEGLE G++
Subjt:  SSISFLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKL

Query:  GLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDKLCNHMKEEMYQNIIFAQMPKFLNDY
        GL+RLG+LLG+KRFG KHHAGSDSLLTA +H KM + + L+S   DG+LYGL +KL  HMK  + Q I+F Q+   L DY
Subjt:  GLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDKLCNHMKEEMYQNIIFAQMPKFLNDY

KAG7027009.1 putative CCR4-associated factor 1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-9266.93Show/hide
Query:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS
        LIREVWA NL  EI +LD CL S S++SIDTEFPG I+ TPWG+ID+ +Y D RFNVNQTK+IQ+G+TVSD+ GN+ G+WEFNFSDFD E+DAHNP+SI 
Subjt:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS

Query:  FLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQR
        FLKQNGLDF K+KKDGI ++ F+    Y L K+ ++RW+TFHGLYDIGY   A+G+VK LPE++ EF  IV+  +G VRDLK+MARFCEGLE G LGL++
Subjt:  FLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQR

Query:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDK
        LGQLL QKRFG KHHAGSDSL+TA LH KM+Q Y   +EICDG+LYGLS K
Subjt:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDK

XP_022947867.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]6.7e-9264.26Show/hide
Query:  KKKEMDTRECSLIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDL
        + +E   R    I+EVWASN   EI +L+ CL++N ILSIDTEFPG IRSTPWGSID+ VYEDLRFNVNQTKLIQ+GLT SD+SG V GSWEFNFSDFD 
Subjt:  KKKEMDTRECSLIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDL

Query:  ELDAHNPSSISFLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCE
        ++D  NPSSI+FL+QNGLDF K+KK GIPL LF+     ++ ++++ +WVTFHGLYDIGY   A+G+ +ELPES++EF E+V+  +GVVRDLK +AR+CE
Subjt:  ELDAHNPSSISFLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCE

Query:  GLEDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDKL
        GLE G++GL+RLG+LLG+KRFG KHHAGSDSLLTA +H KM + + L+SE  DG+LYGL +KL
Subjt:  GLEDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDKL

XP_022947868.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]2.7e-9368.13Show/hide
Query:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS
        LIREVWA NL  EI +LD CL S SI+SIDTEFPG I+ TPWG+ D+ +Y D RFNVNQTK+IQ+G+TVSD+SGN+ G+WEFNFSDFD E+DAHNP+SI 
Subjt:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS

Query:  FLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQR
        FLKQNGLDF K+KKDGI ++ F+    Y LGK+ ++RWVTFHGLYDIGY   A+G+VK LPE++ EF  IV+  +G VRDLK+MARFCEGLE G LGL++
Subjt:  FLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQR

Query:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDK
        LGQLL QKRFG KHHAGSDSL+TA LH KM+Q Y   +EICDG+LYGLS K
Subjt:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDK

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]1.9e-9463.87Show/hide
Query:  SLIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSI
        SLI +VWASN   EISKL+ CLE ++I+SIDTEFPGFIR++PWGSID+ +YED RFNVNQTKLIQ+GLT  D SG + GSWEFNFSDFD E+DA +PSS 
Subjt:  SLIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSI

Query:  SFLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIE-IVSALGVVRDLKYMARFCEGLEDGKLGLQ
        SFL+QNGLDF K+KK GIP+ LF+    +++ K+ +FRWVTFHGLYDIGY   A+G+ + LPE+++EF   +V  LG+VRDLK+MARFCEGLEDGKLGL+
Subjt:  SFLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIE-IVSALGVVRDLKYMARFCEGLEDGKLGLQ

Query:  RLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDKLCN---HMKEEMYQNIIFAQMP
        RLG+LL QKR+G KH+AGSDSLLTAS H +MIQ + + +EICDGYLYG S+KL +   +M     + I F Q+P
Subjt:  RLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDKLCN---HMKEEMYQNIIFAQMP

TrEMBL top hitse value%identityAlignment
A0A6J1CXP9 Poly(A)-specific ribonuclease5.6e-9260Show/hide
Query:  KKEMDTRECSLIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLE
        K+    R  + IREVW+ N   E++ L+ CL    IL+IDTEFPGFIRSTPWG+I++ +Y+D RFNVN+TKLIQ+GLT SD+ GN+  +WEFNFSDFD +
Subjt:  KKEMDTRECSLIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLE

Query:  LDAHNPSSISFLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEG
        +D HN SS+SFLKQNGLDF+K+K+ GIP+  F++   ++  K+++ RWVTFHGLYDIGY   A+G+  E+PES++EF E+V  ALG V DLK+MA+FCEG
Subjt:  LDAHNPSSISFLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEG

Query:  LEDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDKLCNHMKEEMYQNIIFAQMP
        LEDGKLGL++L QL+ QKRFG KHHAGSDSLLTASL+ KM   + L SE+CDG+LYGL  KL  H K ++YQN++F Q+P
Subjt:  LEDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDKLCNHMKEEMYQNIIFAQMP

A0A6J1G7L2 Poly(A)-specific ribonuclease3.3e-9264.26Show/hide
Query:  KKKEMDTRECSLIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDL
        + +E   R    I+EVWASN   EI +L+ CL++N ILSIDTEFPG IRSTPWGSID+ VYEDLRFNVNQTKLIQ+GLT SD+SG V GSWEFNFSDFD 
Subjt:  KKKEMDTRECSLIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDL

Query:  ELDAHNPSSISFLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCE
        ++D  NPSSI+FL+QNGLDF K+KK GIPL LF+     ++ ++++ +WVTFHGLYDIGY   A+G+ +ELPES++EF E+V+  +GVVRDLK +AR+CE
Subjt:  ELDAHNPSSISFLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCE

Query:  GLEDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDKL
        GLE G++GL+RLG+LLG+KRFG KHHAGSDSLLTA +H KM + + L+SE  DG+LYGL +KL
Subjt:  GLEDGKLGLQRLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDKL

A0A6J1G7T4 Poly(A)-specific ribonuclease1.3e-9368.13Show/hide
Query:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS
        LIREVWA NL  EI +LD CL S SI+SIDTEFPG I+ TPWG+ D+ +Y D RFNVNQTK+IQ+G+TVSD+SGN+ G+WEFNFSDFD E+DAHNP+SI 
Subjt:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS

Query:  FLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQR
        FLKQNGLDF K+KKDGI ++ F+    Y LGK+ ++RWVTFHGLYDIGY   A+G+VK LPE++ EF  IV+  +G VRDLK+MARFCEGLE G LGL++
Subjt:  FLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQR

Query:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDK
        LGQLL QKRFG KHHAGSDSL+TA LH KM+Q Y   +EICDG+LYGLS K
Subjt:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDK

A0A6J1I3Q4 Poly(A)-specific ribonuclease4.0e-9065.34Show/hide
Query:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS
        LI EVWA NL DEI +LD CL    ++SIDTEFPG I+ TPWG+ID+ +Y D RFNVNQTK+IQ+G+TVSD+SGN+ G+WEFNFSDFD E+DAHNP+SI 
Subjt:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS

Query:  FLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQR
        FLKQNGLDF K+KKDGI ++ F+    Y + K+ + +W+TFHGLYDIGY   A+G+VK LPE++ EF  IV+  +G VRDLK+MARFCEGLE G LGL++
Subjt:  FLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQR

Query:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDK
        LGQLL QKRFG KHHAGSDSL+T  LH KM+Q Y   +EICDG+LYGLS K
Subjt:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDK

A0A6J1I6H7 Poly(A)-specific ribonuclease1.4e-9065.74Show/hide
Query:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS
        LI EVWA NL DEI +LD CL    ++SIDTEFPG I+ TPWG+ID+ +Y D RFNVNQTK+IQ+G+TVSD+SGN+ G+WEFNFSDFD E+DAHNP+SI 
Subjt:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS

Query:  FLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQR
        FLKQNGLDF K+KKDGI ++ F+    Y + K+ + +W+TFHGLYDIGY   A+G+VK LPE++ EF  IV+  +G VRDLK+MARFCEGLE G LGL++
Subjt:  FLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGY---AIGLVKELPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQR

Query:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDK
        LGQLL QKRFG KHHAGSDSL+TA LH KM+Q Y   +EICDG+LYGLS K
Subjt:  LGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDK

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 54.2e-4444.54Show/hide
Query:  EVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLK
        EVW  N   E++ +  CL+  + ++IDTEFPG ++ TP  + D+I Y D++FNV+ T LIQ+GLT+  +   +  +WE N SDF+      N  SI+FLK
Subjt:  EVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLK

Query:  QNGLDFEKIKKDGIPLKLFSTCIRYVLG-KNKMFRWVTFHGLYDIGYAI-GLV-KELPESVKEFIEIVSAL--GVVRDLKYMARFCEGLEDGKLGLQRLG
         NGLD +KI+++GI ++ F      +L  K+   RWVTF G YD  Y + GL  K LPE+ KEF E V  L    V D+K MA  C GL   + GLQR+ 
Subjt:  QNGLDFEKIKKDGIPLKLFSTCIRYVLG-KNKMFRWVTFHGLYDIGYAI-GLV-KELPESVKEFIEIVSAL--GVVRDLKYMARFCEGLEDGKLGLQRLG

Query:  QLLGQKRFGRKHHAGSDSLLTASLHTKMI
         +L  +R G+ HHAGSDS LTA + TK+I
Subjt:  QLLGQKRFGRKHHAGSDSLLTASLHTKMI

Q9C6M9 Putative CCR4-associated factor 1 homolog 49.6e-4142.79Show/hide
Query:  EVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLK
        EVW  N   E+  +  CL+  S ++IDTEFPG ++ TP  + ++I Y D++FNV+ T LIQ+G T+ D+ G +  +WE N SDF+      N  SI+FLK
Subjt:  EVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLK

Query:  QNGLDFEKIKKDGIPLKLFSTCIRYVL-GKNKMFRWVTFHGLYDIGYAI-GLV--KELPESVKEFIEIVSAL--GVVRDLKYMARFCEGLEDGKLGLQRL
         NGL+ +KI ++GI ++ F      +L  K+    WV F G YD  Y + GL   K LPE+ +EF E V  L    V D+K +A  C GL   + GLQR+
Subjt:  QNGLDFEKIKKDGIPLKLFSTCIRYVL-GKNKMFRWVTFHGLYDIGYAI-GLV--KELPESVKEFIEIVSAL--GVVRDLKYMARFCEGLEDGKLGLQRL

Query:  GQLLGQKRFGRKHHAGSDSLLTASLHTKM
          +L  KR G+ HHAGSDS LTA + TK+
Subjt:  GQLLGQKRFGRKHHAGSDSLLTASLHTKM

Q9LXM4 Putative CCR4-associated factor 1 homolog 81.9e-4143.5Show/hide
Query:  ISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLKQNGLDFEKIK
        +S ++ CL S   ++IDTEFP  +R T   + D+  Y D+ F+V++ KLIQ+GLT+ D +G + G+WE NFSDF ++ DA N  SI FL++NGLD  KI+
Subjt:  ISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLKQNGLDFEKIK

Query:  KDGIPLKLFSTCIRYVLGKNKM-FRWVTFHGLYDIGYAI-GLVKE-LPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQRLGQLLGQKRFGRK
        ++GI ++ F + + ++L K +    WVTFHG YDI Y + G   E LP + + F + V+  LG V DLK MA  CEGL   +LGL+ L    G  R G  
Subjt:  KDGIPLKLFSTCIRYVLGKNKM-FRWVTFHGLYDIGYAI-GLVKE-LPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQRLGQLLGQKRFGRK

Query:  HHAGSDSLLTASLHTKMIQSYGL
        HHAGS++ LTA +  K++  + L
Subjt:  HHAGSDSLLTASLHTKMIQSYGL

Q9SFX6 Putative CCR4-associated factor 1 homolog 31.9e-4142.79Show/hide
Query:  EVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLK
        EVW  N   E++ +  CL+  S ++IDTEFPG ++ TP  + ++I Y D++FNV+ T LIQ+G T+ D+ G  + +WE N SDFD      N  SI+FLK
Subjt:  EVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLK

Query:  QNGLDFEKIKKDGIPL-KLFSTCIRYVLGKNKMFRWVTFHGLYDIGYAI-GLV--KELPESVKEFIEIVSAL--GVVRDLKYMARFCEGLEDGKLGLQRL
         NGL+ +KI+++GI + + F    + +  K+    WV F G YD  Y + GL   K LPE+ +EF E V  L    V D+K +A  C GL   + GLQR+
Subjt:  QNGLDFEKIKKDGIPL-KLFSTCIRYVLGKNKMFRWVTFHGLYDIGYAI-GLV--KELPESVKEFIEIVSAL--GVVRDLKYMARFCEGLEDGKLGLQRL

Query:  GQLLGQKRFGRKHHAGSDSLLTASLHTKM
          +L  KR G+ HHAGSDS LTA + TK+
Subjt:  GQLLGQKRFGRKHHAGSDSLLTASLHTKM

Q9SHJ0 Probable CCR4-associated factor 1 homolog 16.0e-4340.56Show/hide
Query:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS
        L R VW SN+ +E++++  CL+   +++ DTE+PG I  T + S     Y  ++ NV  TKLIQ G T+ +  G + G WE NFS+F    D  N  SI 
Subjt:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS

Query:  FLKQNGLDFEKIKKDGIPL--KLFSTCIRYVLGKNKMFRWVTFHGLYDIGYAIGLVK--ELPESVKEF-IEIVSALGVVRDLKYMARFCEGLEDGKLGLQ
        FL+++GLD +KI+ +G+ +    F   +  V    K   +VTF G YD  Y + ++   +LPE+  EF  E+V   G V D K MA FCEGL +  LGL 
Subjt:  FLKQNGLDFEKIKKDGIPL--KLFSTCIRYVLGKNKMFRWVTFHGLYDIGYAIGLVK--ELPESVKEF-IEIVSALGVVRDLKYMARFCEGLEDGKLGLQ

Query:  RLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGL
        +L QLL   R GR HHAGSDSL+TA +  K+   Y   S    G +YG+
Subjt:  RLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGL

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.3e-4440.56Show/hide
Query:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS
        L R VW SN+ +E++++  CL+   +++ DTE+PG I  T + S     Y  ++ NV  TKLIQ G T+ +  G + G WE NFS+F    D  N  SI 
Subjt:  LIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSIS

Query:  FLKQNGLDFEKIKKDGIPL--KLFSTCIRYVLGKNKMFRWVTFHGLYDIGYAIGLVK--ELPESVKEF-IEIVSALGVVRDLKYMARFCEGLEDGKLGLQ
        FL+++GLD +KI+ +G+ +    F   +  V    K   +VTF G YD  Y + ++   +LPE+  EF  E+V   G V D K MA FCEGL +  LGL 
Subjt:  FLKQNGLDFEKIKKDGIPL--KLFSTCIRYVLGKNKMFRWVTFHGLYDIGYAIGLVK--ELPESVKEF-IEIVSALGVVRDLKYMARFCEGLEDGKLGLQ

Query:  RLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGL
        +L QLL   R GR HHAGSDSL+TA +  K+   Y   S    G +YG+
Subjt:  RLGQLLGQKRFGRKHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGL

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-4242.79Show/hide
Query:  EVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLK
        EVW  N   E++ +  CL+  S ++IDTEFPG ++ TP  + ++I Y D++FNV+ T LIQ+G T+ D+ G  + +WE N SDFD      N  SI+FLK
Subjt:  EVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLK

Query:  QNGLDFEKIKKDGIPL-KLFSTCIRYVLGKNKMFRWVTFHGLYDIGYAI-GLV--KELPESVKEFIEIVSAL--GVVRDLKYMARFCEGLEDGKLGLQRL
         NGL+ +KI+++GI + + F    + +  K+    WV F G YD  Y + GL   K LPE+ +EF E V  L    V D+K +A  C GL   + GLQR+
Subjt:  QNGLDFEKIKKDGIPL-KLFSTCIRYVLGKNKMFRWVTFHGLYDIGYAI-GLV--KELPESVKEFIEIVSAL--GVVRDLKYMARFCEGLEDGKLGLQRL

Query:  GQLLGQKRFGRKHHAGSDSLLTASLHTKM
          +L  KR G+ HHAGSDS LTA + TK+
Subjt:  GQLLGQKRFGRKHHAGSDSLLTASLHTKM

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.8e-4242.79Show/hide
Query:  EVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLK
        EVW  N   E+  +  CL+  S ++IDTEFPG ++ TP  + ++I Y D++FNV+ T LIQ+G T+ D+ G +  +WE N SDF+      N  SI+FLK
Subjt:  EVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLK

Query:  QNGLDFEKIKKDGIPLKLFSTCIRYVL-GKNKMFRWVTFHGLYDIGYAI-GLV--KELPESVKEFIEIVSAL--GVVRDLKYMARFCEGLEDGKLGLQRL
         NGL+ +KI ++GI ++ F      +L  K+    WV F G YD  Y + GL   K LPE+ +EF E V  L    V D+K +A  C GL   + GLQR+
Subjt:  QNGLDFEKIKKDGIPLKLFSTCIRYVL-GKNKMFRWVTFHGLYDIGYAI-GLV--KELPESVKEFIEIVSAL--GVVRDLKYMARFCEGLEDGKLGLQRL

Query:  GQLLGQKRFGRKHHAGSDSLLTASLHTKM
          +L  KR G+ HHAGSDS LTA + TK+
Subjt:  GQLLGQKRFGRKHHAGSDSLLTASLHTKM

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.0e-4544.54Show/hide
Query:  EVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLK
        EVW  N   E++ +  CL+  + ++IDTEFPG ++ TP  + D+I Y D++FNV+ T LIQ+GLT+  +   +  +WE N SDF+      N  SI+FLK
Subjt:  EVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLK

Query:  QNGLDFEKIKKDGIPLKLFSTCIRYVLG-KNKMFRWVTFHGLYDIGYAI-GLV-KELPESVKEFIEIVSAL--GVVRDLKYMARFCEGLEDGKLGLQRLG
         NGLD +KI+++GI ++ F      +L  K+   RWVTF G YD  Y + GL  K LPE+ KEF E V  L    V D+K MA  C GL   + GLQR+ 
Subjt:  QNGLDFEKIKKDGIPLKLFSTCIRYVLG-KNKMFRWVTFHGLYDIGYAI-GLV-KELPESVKEFIEIVSAL--GVVRDLKYMARFCEGLEDGKLGLQRLG

Query:  QLLGQKRFGRKHHAGSDSLLTASLHTKMI
         +L  +R G+ HHAGSDS LTA + TK+I
Subjt:  QLLGQKRFGRKHHAGSDSLLTASLHTKMI

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-4243.5Show/hide
Query:  ISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLKQNGLDFEKIK
        +S ++ CL S   ++IDTEFP  +R T   + D+  Y D+ F+V++ KLIQ+GLT+ D +G + G+WE NFSDF ++ DA N  SI FL++NGLD  KI+
Subjt:  ISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSSISFLKQNGLDFEKIK

Query:  KDGIPLKLFSTCIRYVLGKNKM-FRWVTFHGLYDIGYAI-GLVKE-LPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQRLGQLLGQKRFGRK
        ++GI ++ F + + ++L K +    WVTFHG YDI Y + G   E LP + + F + V+  LG V DLK MA  CEGL   +LGL+ L    G  R G  
Subjt:  KDGIPLKLFSTCIRYVLGKNKM-FRWVTFHGLYDIGYAI-GLVKE-LPESVKEFIEIVS-ALGVVRDLKYMARFCEGLEDGKLGLQRLGQLLGQKRFGRK

Query:  HHAGSDSLLTASLHTKMIQSYGL
        HHAGS++ LTA +  K++  + L
Subjt:  HHAGSDSLLTASLHTKMIQSYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAAGGAGATGGACACAAGAGAGTGTTCTTTGATTAGAGAAGTTTGGGCTTCAAATTTACATGATGAAATCTCGAAGCTGGATGCGTGTCTTGAATCCAACTC
TATTTTGTCGATCGACACAGAATTTCCAGGGTTTATTAGAAGCACTCCATGGGGTTCCATTGATAAAATAGTATATGAAGATCTTCGATTCAATGTGAACCAAACAAAGT
TGATTCAAATGGGTTTAACAGTATCTGATCAATCAGGGAATGTTCGCGGCTCATGGGAGTTCAACTTCTCGGACTTCGATCTTGAATTGGACGCCCACAATCCTTCATCG
ATTTCGTTTCTGAAACAGAATGGCCTTGATTTTGAGAAAATAAAGAAAGATGGAATCCCGCTGAAACTATTCAGTACGTGCATCCGTTATGTGTTGGGAAAGAATAAGAT
GTTCAGATGGGTCACATTTCATGGATTGTACGACATCGGGTATGCGATTGGATTAGTGAAGGAATTGCCGGAATCAGTGAAAGAATTTATAGAGATAGTGAGTGCATTGG
GGGTTGTGAGGGATTTGAAGTACATGGCTCGGTTTTGTGAAGGATTGGAAGATGGGAAACTTGGACTTCAAAGATTGGGTCAATTATTAGGCCAAAAGCGCTTTGGAAGA
AAGCATCATGCTGGTTCTGACAGTTTGTTAACTGCTTCTTTACATACAAAGATGATACAAAGTTATGGTTTGAAATCAGAAATTTGTGATGGATATTTGTATGGCCTCTC
CGACAAACTCTGCAACCATATGAAAGAGGAAATGTATCAGAACATCATCTTTGCTCAAATGCCAAAATTTCTGAATGATTATTGGTTGTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGAAGGAGATGGACACAAGAGAGTGTTCTTTGATTAGAGAAGTTTGGGCTTCAAATTTACATGATGAAATCTCGAAGCTGGATGCGTGTCTTGAATCCAACTC
TATTTTGTCGATCGACACAGAATTTCCAGGGTTTATTAGAAGCACTCCATGGGGTTCCATTGATAAAATAGTATATGAAGATCTTCGATTCAATGTGAACCAAACAAAGT
TGATTCAAATGGGTTTAACAGTATCTGATCAATCAGGGAATGTTCGCGGCTCATGGGAGTTCAACTTCTCGGACTTCGATCTTGAATTGGACGCCCACAATCCTTCATCG
ATTTCGTTTCTGAAACAGAATGGCCTTGATTTTGAGAAAATAAAGAAAGATGGAATCCCGCTGAAACTATTCAGTACGTGCATCCGTTATGTGTTGGGAAAGAATAAGAT
GTTCAGATGGGTCACATTTCATGGATTGTACGACATCGGGTATGCGATTGGATTAGTGAAGGAATTGCCGGAATCAGTGAAAGAATTTATAGAGATAGTGAGTGCATTGG
GGGTTGTGAGGGATTTGAAGTACATGGCTCGGTTTTGTGAAGGATTGGAAGATGGGAAACTTGGACTTCAAAGATTGGGTCAATTATTAGGCCAAAAGCGCTTTGGAAGA
AAGCATCATGCTGGTTCTGACAGTTTGTTAACTGCTTCTTTACATACAAAGATGATACAAAGTTATGGTTTGAAATCAGAAATTTGTGATGGATATTTGTATGGCCTCTC
CGACAAACTCTGCAACCATATGAAAGAGGAAATGTATCAGAACATCATCTTTGCTCAAATGCCAAAATTTCTGAATGATTATTGGTTGTGTTGA
Protein sequenceShow/hide protein sequence
MKKKEMDTRECSLIREVWASNLHDEISKLDACLESNSILSIDTEFPGFIRSTPWGSIDKIVYEDLRFNVNQTKLIQMGLTVSDQSGNVRGSWEFNFSDFDLELDAHNPSS
ISFLKQNGLDFEKIKKDGIPLKLFSTCIRYVLGKNKMFRWVTFHGLYDIGYAIGLVKELPESVKEFIEIVSALGVVRDLKYMARFCEGLEDGKLGLQRLGQLLGQKRFGR
KHHAGSDSLLTASLHTKMIQSYGLKSEICDGYLYGLSDKLCNHMKEEMYQNIIFAQMPKFLNDYWLC