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Tan0021593 (gene) of Snake gourd v1 genome

Gene IDTan0021593
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLate embryogenesis abundant protein
Genome locationLG06:2932203..2933635
RNA-Seq ExpressionTan0021593
SyntenyTan0021593
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461081.1 PREDICTED: late embryogenesis abundant protein D-7 [Cucumis melo]2.1e-3875.59Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK
        MASH+QSYRAGETK RAEEKTNQAMG MGEKA +AKEKTYETGRA ++KAHGAA+STK+WA           S+ AQ+ REKAQ GKETTGG+LEQTGEK
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK

Query:  VKCMAQGAADAVKSTFGMA-QHDDDVD
        VK MAQGAA+AVKSTFGMA Q+DDDVD
Subjt:  VKCMAQGAADAVKSTFGMA-QHDDDVD

XP_011659535.1 late embryogenesis abundant protein D-7 [Cucumis sativus]6.9e-4276.52Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK
        MASH+QSYRAGETK RAEEKTNQAMG MGEKA +AKEKTYETGRAAREKAHGAA+STK+WA           S+ AQ+ REKAQ GKETTGG+LEQTGEK
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK

Query:  VKCMAQGAADAVKSTFGMAQHDDDVDNVSGPT
        VK MAQGAA+AVKSTFGMAQHD+DVD  S  T
Subjt:  VKCMAQGAADAVKSTFGMAQHDDDVDNVSGPT

XP_022150150.1 late embryogenesis abundant protein Dc3-like [Momordica charantia]7.8e-3869.23Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEK-----------AQSAREKAQYGKET
        MA+HDQ +RAGETK RAEEKTNQ M  MGEKA + K+KTYETGRAAR+K           A+ESK+QSGSYLSEK           AQ+AREKAQ GKE 
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEK-----------AQSAREKAQYGKET

Query:  TGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDNVSGPT
        TGG+LEQTGEKVK MAQGAADAVKSTFGMAQHDDDVD  S PT
Subjt:  TGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDNVSGPT

XP_023548700.1 late embryogenesis abundant protein 7 [Cucurbita pepo subsp. pepo]1.7e-4575.71Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK
        MASH+QSY+AGETK RAEEKT+QAMG MG+KA +AKEKTYETG+AA++KAHGAAESTK+WA+ESKDQ+GSY+S+KAQ+AREKAQ GKETTGG+LEQTGEK
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK

Query:  VKCMAQGAADAVKSTFGMAQHDDDV--DNVSGPTATNPKG
        VK MAQGAA+AVKSTFGMA HDDDV  +     T T  +G
Subjt:  VKCMAQGAADAVKSTFGMAQHDDDV--DNVSGPTATNPKG

XP_038899464.1 LOW QUALITY PROTEIN: late embryogenesis abundant protein 2-like [Benincasa hispida]3.1e-4276.52Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK
        MASH+QSYRAGETK RAEEKTN+ MG MG+KA +AKEKTYETGRAAREKAHGAA+STK+WA           S+ AQ AREKAQ GKETTGG+LEQTGEK
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK

Query:  VKCMAQGAADAVKSTFGMAQHDDDVDNVSGPT
        VK MAQGAADAVKSTFGMAQHDD+VD  S PT
Subjt:  VKCMAQGAADAVKSTFGMAQHDDDVDNVSGPT

TrEMBL top hitse value%identityAlignment
A0A0A0K6E1 Uncharacterized protein3.3e-4276.52Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK
        MASH+QSYRAGETK RAEEKTNQAMG MGEKA +AKEKTYETGRAAREKAHGAA+STK+WA           S+ AQ+ REKAQ GKETTGG+LEQTGEK
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK

Query:  VKCMAQGAADAVKSTFGMAQHDDDVDNVSGPT
        VK MAQGAA+AVKSTFGMAQHD+DVD  S  T
Subjt:  VKCMAQGAADAVKSTFGMAQHDDDVDNVSGPT

A0A1S3CEC9 late embryogenesis abundant protein D-71.0e-3875.59Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK
        MASH+QSYRAGETK RAEEKTNQAMG MGEKA +AKEKTYETGRA ++KAHGAA+STK+WA           S+ AQ+ REKAQ GKETTGG+LEQTGEK
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK

Query:  VKCMAQGAADAVKSTFGMA-QHDDDVD
        VK MAQGAA+AVKSTFGMA Q+DDDVD
Subjt:  VKCMAQGAADAVKSTFGMA-QHDDDVD

A0A5A7UUB6 Late embryogenesis abundant protein D-71.0e-3875.59Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK
        MASH+QSYRAGETK RAEEKTNQAMG MGEKA +AKEKTYETGRA ++KAHGAA+STK+WA           S+ AQ+ REKAQ GKETTGG+LEQTGEK
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK

Query:  VKCMAQGAADAVKSTFGMA-QHDDDVD
        VK MAQGAA+AVKSTFGMA Q+DDDVD
Subjt:  VKCMAQGAADAVKSTFGMA-QHDDDVD

A0A6J1D7P2 late embryogenesis abundant protein Dc3-like3.8e-3869.23Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEK-----------AQSAREKAQYGKET
        MA+HDQ +RAGETK RAEEKTNQ M  MGEKA + K+KTYETGRAAR+K           A+ESK+QSGSYLSEK           AQ+AREKAQ GKE 
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEK-----------AQSAREKAQYGKET

Query:  TGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDNVSGPT
        TGG+LEQTGEKVK MAQGAADAVKSTFGMAQHDDDVD  S PT
Subjt:  TGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDNVSGPT

A0A6J1GPH8 late embryogenesis abundant protein 79.4e-3768.12Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK
        MASH+QSY+AGETK RAEEKT+QAMG MG                  +KAHGAAESTK+WA+ESKDQ+GSY+S+KAQ+AREKAQ GKETTGG+LEQTGEK
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK

Query:  VKCMAQGAADAVKSTFGMAQHDDDVDNVSGPTATNPKG
        VK MAQGAADAVKSTFGMA HDDDV      T T  +G
Subjt:  VKCMAQGAADAVKSTFGMAQHDDDVDNVSGPTATNPKG

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 11.5e-2040.94Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEK--------------------------------------------TYETGRAAREKAHGAAES
        MASHDQSY+AGET  R EEKTNQ +G + +KA+ AKEK                                            T +T +AA++K     E+
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEK--------------------------------------------TYETGRAAREKAHGAAES

Query:  TKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDN
        TK+ A+++  ++    SE  QS +E AQ GK+ + G L+QTGEKVK MAQGA DAVK TFGMA  D D D+
Subjt:  TKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDN

O49817 Late embryogenesis abundant protein 26.3e-2244.97Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEK----------------------AEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQS
        M SHDQSYRAGE K R EEKTNQ +G + +K                      A+ AKEKT +T +AA++K     ++TK+ A+++  ++    SE  QS
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEK----------------------AEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQS

Query:  AREKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDN
         +E AQ GK+ + G L+QTGEK K MAQGA DAVK TFGM   D D D+
Subjt:  AREKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDN

P13939 Late embryogenesis abundant protein D-76.9e-2149.61Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK
        MASH+QSY+AG  + RA EK  Q    M EKAE AK+KT ET  AA++K    AE+ K     + + +     + A +AR KA+  KET+GG+L+Q GEK
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEK

Query:  VKCMAQGAADAVKSTFGMAQHDDDVDN
        V+  AQGA DAVK TFGMA  D+D  N
Subjt:  VKCMAQGAADAVKSTFGMAQHDDDVDN

Q96270 Late embryogenesis abundant protein 72.3e-2446.5Show/hide
Query:  MASH-DQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKD-----------WAEESKDQSGSYLSE-----------KAQ
        MASH +QSY+AGET+ +A+EKT +AMG MG+K + AK+KT ET ++A++KAH  A+S KD            A+ESKD++GSY+SE            A+
Subjt:  MASH-DQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKD-----------WAEESKDQSGSYLSE-----------KAQ

Query:  SAREKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDNVSGPTAT
          +E A+ GKE T G+L QTGE+VK MA GA DAVK T G+   + + ++VS   +T
Subjt:  SAREKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDNVSGPTAT

Q9LW12 Late embryogenesis abundant protein 294.1e-2139.13Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQ----------------------AKEKTYETGRAAREKAHGAAESTK--------------------
        MAS+ QSY+AGET+ +A+EKT QAMG M +KAE+                      AK+KT +T +AA++KAH  A+S K                    
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQ----------------------AKEKTYETGRAAREKAHGAAESTK--------------------

Query:  ---------DWAEESKDQSGSYLSE-------KAQSA---------------REKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDN
                 D A E+KD++GSYLSE       KAQ A               +E A+ G++ TGG L QTGE VK MA GAADAVK TFGMA  ++D ++
Subjt:  ---------DWAEESKDQSGSYLSE-------KAQSA---------------REKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDN

Query:  VSGPTAT
          G T T
Subjt:  VSGPTAT

Arabidopsis top hitse value%identityAlignment
AT1G52690.1 Late embryogenesis abundant protein (LEA) family protein1.6e-2546.5Show/hide
Query:  MASH-DQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKD-----------WAEESKDQSGSYLSE-----------KAQ
        MASH +QSY+AGET+ +A+EKT +AMG MG+K + AK+KT ET ++A++KAH  A+S KD            A+ESKD++GSY+SE            A+
Subjt:  MASH-DQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKD-----------WAEESKDQSGSYLSE-----------KAQ

Query:  SAREKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDNVSGPTAT
          +E A+ GKE T G+L QTGE+VK MA GA DAVK T G+   + + ++VS   +T
Subjt:  SAREKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDNVSGPTAT

AT1G52690.2 Late embryogenesis abundant protein (LEA) family protein1.6e-2546.5Show/hide
Query:  MASH-DQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKD-----------WAEESKDQSGSYLSE-----------KAQ
        MASH +QSY+AGET+ +A+EKT +AMG MG+K + AK+KT ET ++A++KAH  A+S KD            A+ESKD++GSY+SE            A+
Subjt:  MASH-DQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKD-----------WAEESKDQSGSYLSE-----------KAQ

Query:  SAREKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDNVSGPTAT
          +E A+ GKE T G+L QTGE+VK MA GA DAVK T G+   + + ++VS   +T
Subjt:  SAREKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDNVSGPTAT

AT3G15670.1 Late embryogenesis abundant protein (LEA) family protein2.9e-2239.13Show/hide
Query:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQ----------------------AKEKTYETGRAAREKAHGAAESTK--------------------
        MAS+ QSY+AGET+ +A+EKT QAMG M +KAE+                      AK+KT +T +AA++KAH  A+S K                    
Subjt:  MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQ----------------------AKEKTYETGRAAREKAHGAAESTK--------------------

Query:  ---------DWAEESKDQSGSYLSE-------KAQSA---------------REKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDN
                 D A E+KD++GSYLSE       KAQ A               +E A+ G++ TGG L QTGE VK MA GAADAVK TFGMA  ++D ++
Subjt:  ---------DWAEESKDQSGSYLSE-------KAQSA---------------REKAQYGKETTGGLLEQTGEKVKCMAQGAADAVKSTFGMAQHDDDVDN

Query:  VSGPTAT
          G T T
Subjt:  VSGPTAT

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein4.8e-0938.05Show/hide
Query:  QSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEKVKCMA
        Q + AG+ + +A+EK  Q      + A+ A +KT +  ++AR+KA    +S +D     K   GS+      SA + AQ+ +E   GL  QTGE VK MA
Subjt:  QSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEKVKCMA

Query:  QGAADAVKSTFGM
        QGA D VK++ GM
Subjt:  QGAADAVKSTFGM

AT5G44310.1 Late embryogenesis abundant protein (LEA) family protein2.2e-0636.45Show/hide
Query:  RAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEKVKCMAQGA
        +A + K + ++   +A   + E A +A +K YET   A++KA+   E TKD+AEE+K++    ++E A  A +KA   KE T    EQT +KV   A  A
Subjt:  RAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEKVKCMAQGA

Query:  ADAVKST
        AD  + T
Subjt:  ADAVKST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCACGATCAGAGCTACAGAGCTGGTGAAACCAAGGCCCGAGCTGAGGAGAAGACCAATCAGGCGATGGGTATAATGGGGGAGAAGGCCGAACAAGCAAAGGA
GAAGACGTACGAGACTGGGCGGGCCGCAAGGGAGAAGGCCCATGGAGCAGCCGAGTCCACGAAGGATTGGGCCGAAGAGTCCAAAGATCAGTCAGGAAGCTATCTGTCGG
AGAAGGCCCAATCGGCCCGAGAAAAGGCCCAATATGGAAAAGAGACCACCGGAGGACTTCTGGAGCAGACGGGTGAGAAAGTGAAGTGTATGGCCCAAGGAGCAGCCGAT
GCCGTCAAAAGCACTTTTGGTATGGCCCAGCATGATGATGACGTGGACAATGTCAGTGGCCCCACCGCCACCAACCCCAAGGGCTAA
mRNA sequenceShow/hide mRNA sequence
CAAAATACAAAAATACAAAGCAAAAAGCCAAGCAAAAGTCAGAGTCCAATTCCTAAAAAGAGATTAAAAAGAAAAAAATGGCTTCCCACGATCAGAGCTACAGAGCTGGT
GAAACCAAGGCCCGAGCTGAGGAGAAGACCAATCAGGCGATGGGTATAATGGGGGAGAAGGCCGAACAAGCAAAGGAGAAGACGTACGAGACTGGGCGGGCCGCAAGGGA
GAAGGCCCATGGAGCAGCCGAGTCCACGAAGGATTGGGCCGAAGAGTCCAAAGATCAGTCAGGAAGCTATCTGTCGGAGAAGGCCCAATCGGCCCGAGAAAAGGCCCAAT
ATGGAAAAGAGACCACCGGAGGACTTCTGGAGCAGACGGGTGAGAAAGTGAAGTGTATGGCCCAAGGAGCAGCCGATGCCGTCAAAAGCACTTTTGGTATGGCCCAGCAT
GATGATGACGTGGACAATGTCAGTGGCCCCACCGCCACCAACCCCAAGGGCTAATTCGTCATTTCGGATAAATATTTCATTTTCCGAAATTCCGAATTGTAGTGTCTTTT
TTTTTTTTTTTTCTCTTGTTAGTTTTGTTTGG
Protein sequenceShow/hide protein sequence
MASHDQSYRAGETKARAEEKTNQAMGIMGEKAEQAKEKTYETGRAAREKAHGAAESTKDWAEESKDQSGSYLSEKAQSAREKAQYGKETTGGLLEQTGEKVKCMAQGAAD
AVKSTFGMAQHDDDVDNVSGPTATNPKG