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Tan0021597 (gene) of Snake gourd v1 genome

Gene IDTan0021597
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCysteine-rich PDZ-binding protein
Genome locationLG03:77361903..77363769
RNA-Seq ExpressionTan0021597
SyntenyTan0021597
Gene Ontology termsGO:0031122 - cytoplasmic microtubule organization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsIPR019367 - PDZ-binding protein, CRIPT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134750.1 cysteine-rich PDZ-binding protein [Cucumis sativus]5.3e-4997.92Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNT ESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

XP_021887355.1 cysteine-rich PDZ-binding protein [Carica papaya]6.9e-4997.92Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNT E+GGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

XP_022142069.1 cysteine-rich PDZ-binding protein [Momordica charantia]8.1e-5097.92Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKL+KVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQV+DTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

XP_031258894.1 cysteine-rich PDZ-binding protein-like [Pistacia vera]6.9e-4996.88Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKL+KVIVPDKWKEGASNT+E+GGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

XP_038882901.1 cysteine-rich PDZ-binding protein [Benincasa hispida]1.8e-4998.96Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNT ESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

TrEMBL top hitse value%identityAlignment
A0A067GJC6 Cysteine-rich PDZ-binding protein4.3e-4996.88Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNT E+GGRK+NENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

A0A0A0KHE3 Cysteine-rich PDZ-binding protein2.5e-4997.92Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNT ESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

A0A1S3B0M5 Cysteine-rich PDZ-binding protein2.5e-4997.92Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNT ESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

A0A5D3CPV5 Cysteine-rich PDZ-binding protein2.5e-4997.92Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNT ESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

A0A6J1CKJ0 Cysteine-rich PDZ-binding protein3.9e-5097.92Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKL+KVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQV+DTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

SwissProt top hitse value%identityAlignment
O70333 Cysteine-rich PDZ-binding protein1.4e-3167.33Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSN
        MVCEKCEKKL +VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ  + YC  CAY KG+CAMCGK+VLDTK YKQ++
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSN

Query:  V
        V
Subjt:  V

Q3ZC66 Cysteine-rich PDZ-binding protein3.0e-3167.33Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSN
        MVCEKCEKKL  VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ  + YC  CAY KG+CAMCGK+VLDTK YKQ++
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSN

Query:  V
        V
Subjt:  V

Q567Z6 Cysteine-rich PDZ-binding protein3.0e-3165.35Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLL-SKKKRWTPYGNT---KCIICKQQVHQD-AKYCHTCAYSKGVCAMCGKQVLDTKFYKQSN
        MVCEKCEKKL +VI PD WK+GA NT ESGGRK+NENK+L SKK R+ PYG +    C ICK  VHQ  + YC  CAY KG+CAMCGK+V+DTK YKQ++
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLL-SKKKRWTPYGNT---KCIICKQQVHQD-AKYCHTCAYSKGVCAMCGKQVLDTKFYKQSN

Query:  V
        V
Subjt:  V

Q792Q4 Cysteine-rich PDZ-binding protein1.4e-3167.33Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSN
        MVCEKCEKKL +VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ  + YC  CAY KG+CAMCGK+VLDTK YKQ++
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSN

Query:  V
        V
Subjt:  V

Q9P021 Cysteine-rich PDZ-binding protein3.0e-3167.33Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSN
        MVCEKCEKKL  VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ  + YC  CAY KG+CAMCGK+VLDTK YKQ++
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSN

Query:  V
        V
Subjt:  V

Arabidopsis top hitse value%identityAlignment
AT1G61780.1 postsynaptic protein-related1.7e-4584.69Show/hide
Query:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYG--NTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVC+KCEKKLSKVIVPDKWK+GA N  E GGRKINENKLLSKK RW+PY    TKC+ICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTK YKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYG--NTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTGTGAGAAGTGTGAAAAGAAGCTGTCGAAGGTGATAGTGCCGGACAAGTGGAAAGAAGGCGCAAGCAACACCCATGAAAGCGGCGGCCGTAAAATTAACGAGAA
CAAGCTTCTCTCCAAGAAGAAAAGGTGGACTCCTTATGGAAACACGAAGTGCATAATTTGTAAGCAGCAAGTACACCAGGATGCCAAGTATTGTCATACATGTGCTTACA
GCAAAGGGGTTTGTGCTATGTGTGGGAAGCAAGTACTTGACACCAAGTTTTACAAACAAAGCAACGTGTAA
mRNA sequenceShow/hide mRNA sequence
AAGATTTGCTCGTTGAGGGCTTGTGATTTGCCATTATAGGGAAGAGCGACCCTCATCCCCCGATTTCACAAATTTGAAGAAACGTTGGTCGAATTCGAATCCTCTACCGA
CCGGCTGCTTCTGGCGGATTCCTTATCGGTCACGGACAGAAGGAAACCCCATTCCCTCCATAGATCTCCAAATTAGGGCCCCGATTACTTTCATTGGTATATTCGATTTC
AGTTTCGCCTCACCGAGCACTTGGGAAGGACAACCATGGTCTGTGAGAAGTGTGAAAAGAAGCTGTCGAAGGTGATAGTGCCGGACAAGTGGAAAGAAGGCGCAAGCAAC
ACCCATGAAAGCGGCGGCCGTAAAATTAACGAGAACAAGCTTCTCTCCAAGAAGAAAAGGTGGACTCCTTATGGAAACACGAAGTGCATAATTTGTAAGCAGCAAGTACA
CCAGGATGCCAAGTATTGTCATACATGTGCTTACAGCAAAGGGGTTTGTGCTATGTGTGGGAAGCAAGTACTTGACACCAAGTTTTACAAACAAAGCAACGTGTAATTAG
AAGCCAGAACTGATAGTCGTCTTGTAACTCCATCATCAAGGGTTAATAACATGTACTTTGATCCTGATATAACTTTCATCCTGGCATCGATCTATAGTAAATGACTTGAT
TGTTCCTTCTATTTCCTGATCTGACTTGAAGTGTAATTCAACTCAGAGTTTACATTTGTTCGTTTTAGGAAAATTATGTATTATAAAGCTCTATTTTCTTTCCTTTTCAA
TACAGTTATTCTCTGATTTTTCACCTGATGTGATTGTGGTTGAGTTTTTTTTTTTTTTTTCCCTTGAATAAAGGTAAATAGTGCCTATATA
Protein sequenceShow/hide protein sequence
MVCEKCEKKLSKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV