; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021605 (gene) of Snake gourd v1 genome

Gene IDTan0021605
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionarabinogalactan peptide 20
Genome locationLG01:10936167..10937516
RNA-Seq ExpressionTan0021605
SyntenyTan0021605
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577157.1 Arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. sororia]3.9e-2591.55Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF
        MAVSR SFGFVAAA L+FAIFLPVAQPQSLAPAP PTSDGTSIDQGIAY+LMLVALALTYLIHNADLS+SF
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF

XP_022136454.1 arabinogalactan peptide 22-like [Momordica charantia]4.8e-2385.92Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF
        MAVSR SFGFVAAA L+FAIFLPVA P SL PAP P+SDGTSIDQGIAY+LMLVALALTYLIHNADLS+SF
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF

XP_022931316.1 arabinogalactan peptide 22-like [Cucurbita moschata]7.9e-2692.96Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF
        MAVSRTSFGFVAAA L+FAIFLPVAQPQSLAPAP PTSDGTSIDQGIAY+LMLVALALTYLIHNADLS+SF
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF

XP_022985432.1 arabinogalactan peptide 20 [Cucurbita maxima]1.3e-2592.96Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF
        MAVSRTSFGFVAAA L+FAIFLPVAQPQSLAPAP PTSDGTSIDQGIAY+LMLVALALTYLIHNADLS SF
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF

XP_038882280.1 arabinogalactan protein 22-like [Benincasa hispida]4.8e-2384.51Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF
        MAVS  SFGF+AAA L+FAIFLPVAQP SLAPAP PTSDGTSIDQGIAY+LM+VALALTYLIHNADLS++F
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF

TrEMBL top hitse value%identityAlignment
A0A0A0KZS8 Uncharacterized protein4.8e-2183.58Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADL
        MAVSR+SFG +AA  L+FAIFLPVA P SLAPAP PTSDGTSIDQGIAY+LM+VALALTYLIHNADL
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADL

A0A6J1C4C2 arabinogalactan peptide 22-like2.3e-2385.92Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF
        MAVSR SFGFVAAA L+FAIFLPVA P SL PAP P+SDGTSIDQGIAY+LMLVALALTYLIHNADLS+SF
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF

A0A6J1ETC6 arabinogalactan peptide 22-like3.8e-2692.96Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF
        MAVSRTSFGFVAAA L+FAIFLPVAQPQSLAPAP PTSDGTSIDQGIAY+LMLVALALTYLIHNADLS+SF
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF

A0A6J1FMT5 arabinogalactan peptide 22-like2.6e-2288.57Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHS
        MAVSR SFGFVAAA LVF IFLPVAQPQSLAPAP PTSDGTSIDQGIAYILM VALALTYLIH+ADL  S
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHS

A0A6J1J4V7 arabinogalactan peptide 206.5e-2692.96Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF
        MAVSRTSFGFVAAA L+FAIFLPVAQPQSLAPAP PTSDGTSIDQGIAY+LMLVALALTYLIHNADLS SF
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 163.2e-1464.71Show/hide
Query:  SRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF
        SR S    A    VFA+ L +A  QSLAPAP PTSDGTSIDQGIAY+LM+VAL LTYLIH  D S S+
Subjt:  SRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF

Q8L9T8 Arabinogalactan protein 411.5e-1466.67Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIH
        M+ SR  FG      ++FAI LP+A  QS APAP PTSDGT+IDQGIAY+LMLVAL LTYLIH
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIH

Q9FK16 Arabinogalactan protein 222.3e-1260.32Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIH
        MA  +     +A  V++  I LP+AQ  S +PAP PTSDGTSIDQGIAY+LM+VALALTY IH
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIH

Q9M373 Arabinogalactan protein 203.8e-1565.67Show/hide
Query:  SRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHS
        SR S   +A    VFA+  P A  QSLAPAP PTSDGTSIDQGIAY+LM+VAL LTYLIH  D S S
Subjt:  SRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHS

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 162.3e-1564.71Show/hide
Query:  SRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF
        SR S    A    VFA+ L +A  QSLAPAP PTSDGTSIDQGIAY+LM+VAL LTYLIH  D S S+
Subjt:  SRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF

AT3G61640.1 arabinogalactan protein 202.7e-1665.67Show/hide
Query:  SRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHS
        SR S   +A    VFA+  P A  QSLAPAP PTSDGTSIDQGIAY+LM+VAL LTYLIH  D S S
Subjt:  SRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHS

AT5G24105.1 arabinogalactan protein 411.0e-1566.67Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIH
        M+ SR  FG      ++FAI LP+A  QS APAP PTSDGT+IDQGIAY+LMLVAL LTYLIH
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIH

AT5G53250.1 arabinogalactan protein 221.6e-1360.32Show/hide
Query:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIH
        MA  +     +A  V++  I LP+AQ  S +PAP PTSDGTSIDQGIAY+LM+VALALTY IH
Subjt:  MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTCTAGAACATCTTTTGGATTCGTGGCTGCCGCCGTGCTCGTCTTCGCCATCTTCTTGCCGGTTGCTCAGCCTCAGTCTTTGGCTCCGGCTCCCCCTCCCAC
CAGCGACGGGACATCCATAGACCAAGGGATAGCTTATATCTTAATGTTGGTGGCATTGGCACTTACATATCTCATCCACAATGCTGATTTATCTCACAGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
CCCATCGCGAGGCTGTCTCTGTTTCCGTTCAGAGATTTCGTTTCTTCATTTCGCCCTTCGAGAAGGGAAAGGGAGATTCCTTTCTCTCTCTCTCTCTGCGAGCCTCTTTG
AAGCCATTGAAGAAGAAGGGCTTTCTGAAAGCTTCTTGATCTGAGAGACGCATCGCAGAGAGAGATCGATCCTCGTGTACTACATTTCTTGCTTGCGATTCTTCGCCTGA
AGAAAGGAGACGATAAATTACAGCGCGATTTTGAGTCAAATGGCGGTTTCTAGAACATCTTTTGGATTCGTGGCTGCCGCCGTGCTCGTCTTCGCCATCTTCTTGCCGGT
TGCTCAGCCTCAGTCTTTGGCTCCGGCTCCCCCTCCCACCAGCGACGGGACATCCATAGACCAAGGGATAGCTTATATCTTAATGTTGGTGGCATTGGCACTTACATATC
TCATCCACAATGCTGATTTATCTCACAGCTTCTAAAAGGATTATATTTGTATCAAAAAAGCATTTGGCGAACCAATCTCTTTTTGATGGATCTAAGGGGAAGGGAATTTA
GTTAGAAATGAAAATGGGTTTTGAGGGAATTGGATTCTTTTGCATGTTGTAGTGTTCCTTTGGAGTTTCTGTTTTGGTATTATTTATGATGATGAGGAGTCTGTTGATGC
TCTTGCATTTCTATGTACAGTGTCCTGATTTTGAATGAGATTTGTTTGTTGGGTTGGAGGTTA
Protein sequenceShow/hide protein sequence
MAVSRTSFGFVAAAVLVFAIFLPVAQPQSLAPAPPPTSDGTSIDQGIAYILMLVALALTYLIHNADLSHSF