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Tan0021623 (gene) of Snake gourd v1 genome

Gene IDTan0021623
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: outer envelope membrane protein 7 .
Genome locationLG10:7356026..7356354
RNA-Seq ExpressionTan0021623
SyntenyTan0021623
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR038944 - Outer envelope membrane protein 7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB55018.1 hypothetical protein L484_007349 [Morus notabilis]1.2e-0857.14Show/hide
Query:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITSKF
        M+   K+NA RSG+VV+GA+AFGYL+L L FKP+LEKAQ S++H  S+PS+ +S +
Subjt:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITSKF
KAA0049387.1 hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa]1.2e-1669.23Show/hide
Query:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITSKFLR---VSRDFEGRKKDLLLFVD
        MK T KLNAARSGLVVIGALAFGYLSLQ+ FKPYLEKAQS LQHP+ EPSTI    +    VSRD    KKD LL ++
Subjt:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITSKFLR---VSRDFEGRKKDLLLFVD
KAG6582279.1 hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sororia]4.3e-1484.62Show/hide
Query:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTI
        MK   KLNA RSG+VVIGALAFGYLSL LVFKPYLEKAQ SLQHP+SEPSTI
Subjt:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTI
KAG7018683.1 hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-1588.46Show/hide
Query:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTI
        MK   KLNA RSG+VVIGALAFGYLSL LVFKPYLEKAQSSLQHPDSEPSTI
Subjt:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTI
KGN57013.1 hypothetical protein Csa_010432 [Cucumis sativus]1.5e-1974.36Show/hide
Query:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITS---KFLRVSRDFEGRKKDLLLFVD
        MK T KLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHP+ EPSTI       L VSRDF  ++KD LL ++
Subjt:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITS---KFLRVSRDFEGRKKDLLLFVD
TrEMBL top hitse value%identityAlignment
A0A0A0L5N1 Uncharacterized protein7.4e-2074.36Show/hide
Query:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITS---KFLRVSRDFEGRKKDLLLFVD
        MK T KLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHP+ EPSTI       L VSRDF  ++KD LL ++
Subjt:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITS---KFLRVSRDFEGRKKDLLLFVD
A0A2P5E3N7 Uncharacterized protein5.0e-0861.11Show/hide
Query:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITS
        M   TK+NA RSG+VV+GALAFGYL+LQL FKP+LEKAQ +L H +   S+ +S
Subjt:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITS
A0A4D9A3A6 Uncharacterized protein1.3e-0868.63Show/hide
Query:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPST
        M+GT K NA RSGLVVIGALAFGYL+L L FKPYLEKAQ   QH  +  S+
Subjt:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPST
A0A5A7U4W2 Uncharacterized protein5.8e-1769.23Show/hide
Query:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITSKFLR---VSRDFEGRKKDLLLFVD
        MK T KLNAARSGLVVIGALAFGYLSLQ+ FKPYLEKAQS LQHP+ EPSTI    +    VSRD    KKD LL ++
Subjt:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITSKFLR---VSRDFEGRKKDLLLFVD
W9R337 Uncharacterized protein5.9e-0957.14Show/hide
Query:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITSKF
        M+   K+NA RSG+VV+GA+AFGYL+L L FKP+LEKAQ S++H  S+PS+ +S +
Subjt:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITSKF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52420.1 outer envelope membrane protein 77.3e-0439.02Show/hide
Query:  KLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPD
        K + A+   VV+ A+A G+L++++ FKP+L+K +SS+   D
Subjt:  KLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPD
AT3G63160.1 FUNCTIONS IN: molecular_function unknown5.6e-0442.86Show/hide
Query:  RSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTI
        ++  VV+G LA G+L+++LVFKP  +K  SS    DS+ +T+
Subjt:  RSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTI
AT5G19151.1 unknown protein1.1e-0754.55Show/hide
Query:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKA-------QSSLQHPDSE
        MK T   NA RS +VV+G+LAFGYLSL+L +KP+LEKA       QSS QH   +
Subjt:  MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKA-------QSSLQHPDSE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGAACGACGAAGTTGAATGCGGCGAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATACCTGAGCCTACAGCTCGTGTTCAAGCCCTACCTCGAGAA
AGCTCAAAGCTCTCTTCAACATCCCGATTCTGAGCCCTCTACAATTACATCGAAATTTCTCAGAGTTTCAAGAGATTTTGAGGGACGGAAGAAGGATCTATTGCTATTCG
TTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGAACGACGAAGTTGAATGCGGCGAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATACCTGAGCCTACAGCTCGTGTTCAAGCCCTACCTCGAGAA
AGCTCAAAGCTCTCTTCAACATCCCGATTCTGAGCCCTCTACAATTACATCGAAATTTCTCAGAGTTTCAAGAGATTTTGAGGGACGGAAGAAGGATCTATTGCTATTCG
TTGATTGA
Protein sequenceShow/hide protein sequence
MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITSKFLRVSRDFEGRKKDLLLFVD