| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048391.1 RNA polymerase sigma factor sigD [Cucumis melo var. makuwa] | 8.6e-216 | 89.22 | Show/hide |
Query: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESC
MAT+SSLCSLP QSPTLPSISLSSLPSLKTHLPQQPHFPFPPFS+KLG NFIS DTL LPPPPE AVLAVE A EHVLVE R SE WS KN+E+MEESC
Subjt: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESC
Query: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
DG VAWKKKRRKRRKEVG KAEE+W+ALS+ PLRPGYLSPKEEAELCLCLKEA LEK K+RIMETQEHEPTNKQLAIAMG+K GCIDRILCRARESR
Subjt: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
Query: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDKKSRL+RLPGHMGQMVARIAE NNHLGIKLSR
Subjt: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
Query: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
PT++EVAESL V VSTVRLV ERSKRPISINQPVNDR CLTLQEI+PGPDNLTPENMVMRKLMKQELKRLLN+LSKREAHILSLYFGLNGEIPQSFEEI
Subjt: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
GKSLNLSRET+RRINIATLSKL KT++LDY+KDYLV
Subjt: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
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| XP_004149725.1 RNA polymerase sigma factor sigD, chloroplastic [Cucumis sativus] | 2.7e-217 | 89.68 | Show/hide |
Query: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESC
MAT+SSLCSLP QSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLG N ISNDTL LPPPPE AVLAVE A EHVLVE + SE WS KN+EKMEESC
Subjt: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESC
Query: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
DG VAWKKKRRKRRKEVG KAEE+W+ALS+ PLRPGYLSPKEEAELCLCLKEA LE KTRIMETQEHEPTNKQLAIAMG+K GCIDRILCRARESR
Subjt: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
Query: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRL+RLPGHMGQMVARIAE NNHLGIKLSR
Subjt: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
Query: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
PT+KEVAESL VH+ST+RLV ERSKRPISINQPVNDR CLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLN+LSKREA ILSLYFGLNGEIPQSFEEI
Subjt: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
GKSLNLSRET+R+ NIATLSKL KTD+LDYLKDYLV
Subjt: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
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| XP_008461821.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Cucumis melo] | 3.2e-210 | 89.36 | Show/hide |
Query: SPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESCGDDGVVAWKKKRR
SPTLPSISLSSLPSLKTHLPQQPHFPFPPFS+KLG NFIS DTL LPPPPE AVLAVE A EHVLVE R SE WS KN+E+MEESC DG VAWKKKRR
Subjt: SPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESCGDDGVVAWKKKRR
Query: KRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESRDRLIRCYSKLVIS
KRRKEVG KAEE+W+ALS+ PLRPGYLSPKEEAELCLCLKEA LEK K+RIMETQEHEPTNKQLAIAMG+K GCIDRILCRARESRDRLIRCYSKLVIS
Subjt: KRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESRDRLIRCYSKLVIS
Query: IAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSRQPTHKEVAESLNV
IAAPYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDKKSRL+RLPGHMGQMVARIAE NNHLGIKLSR PT++EVAESL V
Subjt: IAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSRQPTHKEVAESLNV
Query: HVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRR
VSTVRLV ERSKRPISINQPVNDR CLTLQEI+PGPDNLTPENMVMRKLMKQELKRLLN+LSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRET+RR
Subjt: HVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRR
Query: INIATLSKLNKTDILDYLKDYLV
INIATLSKL KT++LDY+KDYLV
Subjt: INIATLSKLNKTDILDYLKDYLV
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| XP_022152696.1 RNA polymerase sigma factor sigD, chloroplastic [Momordica charantia] | 1.7e-211 | 87.61 | Show/hide |
Query: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVE-VRVSEAWSCKNLEKMEESC
MAT+SSLCSLPTQSPTLPSISLSSLPSLKTHLP Q HF FPPFSTKLGSNF N+T+A+ PP ETAVLAVE AREHVL E VSE WSC LE++EESC
Subjt: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVE-VRVSEAWSCKNLEKMEESC
Query: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
GDDG V WKKKRRKRRKEVGEKAEE VALS+ PLRPGYL+PKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIA G+ L CIDRILCRA+ESR
Subjt: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
Query: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
DRLI+CYSKLV+SIAAPYQGKGLSLQDLTQEGNIGLL GAERFEPNRGHKLSTYAYWWIRQAIIRALD KSRL+RLPGHMGQMVARIAEANNHLGIKLSR
Subjt: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
Query: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
PTHKE+AESLNV VSTV+LV+ERSKRPIS+NQPV DRGCLTLQEIMPGPDNLTPENMVMRKLMKQEL+RLLN+LSKREAHI+ LYFGLNGEIPQSFEEI
Subjt: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
GKS+NLSRETVRR+NIA LSKL KTDILDYLKDY+V
Subjt: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
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| XP_038906215.1 RNA polymerase sigma factor sigD, chloroplastic [Benincasa hispida] | 1.1e-221 | 90.6 | Show/hide |
Query: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESC
MAT+SSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLG+NFI+NDTL LPPPPE AVL VE AREHVLV+ R SE WSCKNLE+ME SC
Subjt: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESC
Query: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
G DG VAWKKKRRKRRKEVG KAEE+W ALS+ PLRPGYLSPKEEAELCLCLKEAAQLE+AKTRIMETQEHEPTN+QLAIA+G+KLG IDRILCRARESR
Subjt: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
Query: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRL+RLPGHMGQMVARIAEANNHLG+KLSR
Subjt: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
Query: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
PTHKEVAESL V VSTVRLV+ERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQE+KRLLN+LSKREAHILSLYFGLNGEIP+SFEEI
Subjt: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
GKSLNLSRET+R+IN+ATLSKL TDILDYLK+YLV
Subjt: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L9T0 Uncharacterized protein | 1.3e-217 | 89.68 | Show/hide |
Query: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESC
MAT+SSLCSLP QSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLG N ISNDTL LPPPPE AVLAVE A EHVLVE + SE WS KN+EKMEESC
Subjt: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESC
Query: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
DG VAWKKKRRKRRKEVG KAEE+W+ALS+ PLRPGYLSPKEEAELCLCLKEA LE KTRIMETQEHEPTNKQLAIAMG+K GCIDRILCRARESR
Subjt: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
Query: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRL+RLPGHMGQMVARIAE NNHLGIKLSR
Subjt: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
Query: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
PT+KEVAESL VH+ST+RLV ERSKRPISINQPVNDR CLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLN+LSKREA ILSLYFGLNGEIPQSFEEI
Subjt: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
GKSLNLSRET+R+ NIATLSKL KTD+LDYLKDYLV
Subjt: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
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| A0A1S3CFL7 RNA polymerase sigma factor sigD, chloroplastic | 1.5e-210 | 89.36 | Show/hide |
Query: SPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESCGDDGVVAWKKKRR
SPTLPSISLSSLPSLKTHLPQQPHFPFPPFS+KLG NFIS DTL LPPPPE AVLAVE A EHVLVE R SE WS KN+E+MEESC DG VAWKKKRR
Subjt: SPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESCGDDGVVAWKKKRR
Query: KRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESRDRLIRCYSKLVIS
KRRKEVG KAEE+W+ALS+ PLRPGYLSPKEEAELCLCLKEA LEK K+RIMETQEHEPTNKQLAIAMG+K GCIDRILCRARESRDRLIRCYSKLVIS
Subjt: KRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESRDRLIRCYSKLVIS
Query: IAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSRQPTHKEVAESLNV
IAAPYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDKKSRL+RLPGHMGQMVARIAE NNHLGIKLSR PT++EVAESL V
Subjt: IAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSRQPTHKEVAESLNV
Query: HVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRR
VSTVRLV ERSKRPISINQPVNDR CLTLQEI+PGPDNLTPENMVMRKLMKQELKRLLN+LSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRET+RR
Subjt: HVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRR
Query: INIATLSKLNKTDILDYLKDYLV
INIATLSKL KT++LDY+KDYLV
Subjt: INIATLSKLNKTDILDYLKDYLV
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| A0A5D3BP27 RNA polymerase sigma factor sigD | 4.2e-216 | 89.22 | Show/hide |
Query: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESC
MAT+SSLCSLP QSPTLPSISLSSLPSLKTHLPQQPHFPFPPFS+KLG NFIS DTL LPPPPE AVLAVE A EHVLVE R SE WS KN+E+MEESC
Subjt: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEESC
Query: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
DG VAWKKKRRKRRKEVG KAEE+W+ALS+ PLRPGYLSPKEEAELCLCLKEA LEK K+RIMETQEHEPTNKQLAIAMG+K GCIDRILCRARESR
Subjt: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
Query: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDKKSRL+RLPGHMGQMVARIAE NNHLGIKLSR
Subjt: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
Query: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
PT++EVAESL V VSTVRLV ERSKRPISINQPVNDR CLTLQEI+PGPDNLTPENMVMRKLMKQELKRLLN+LSKREAHILSLYFGLNGEIPQSFEEI
Subjt: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
GKSLNLSRET+RRINIATLSKL KT++LDY+KDYLV
Subjt: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
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| A0A6J1DII5 RNA polymerase sigma factor sigD, chloroplastic | 8.2e-212 | 87.61 | Show/hide |
Query: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVE-VRVSEAWSCKNLEKMEESC
MAT+SSLCSLPTQSPTLPSISLSSLPSLKTHLP Q HF FPPFSTKLGSNF N+T+A+ PP ETAVLAVE AREHVL E VSE WSC LE++EESC
Subjt: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVE-VRVSEAWSCKNLEKMEESC
Query: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
GDDG V WKKKRRKRRKEVGEKAEE VALS+ PLRPGYL+PKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIA G+ L CIDRILCRA+ESR
Subjt: GDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESR
Query: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
DRLI+CYSKLV+SIAAPYQGKGLSLQDLTQEGNIGLL GAERFEPNRGHKLSTYAYWWIRQAIIRALD KSRL+RLPGHMGQMVARIAEANNHLGIKLSR
Subjt: DRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSR
Query: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
PTHKE+AESLNV VSTV+LV+ERSKRPIS+NQPV DRGCLTLQEIMPGPDNLTPENMVMRKLMKQEL+RLLN+LSKREAHI+ LYFGLNGEIPQSFEEI
Subjt: QPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
GKS+NLSRETVRR+NIA LSKL KTDILDYLKDY+V
Subjt: GKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
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| A0A6J1FAN3 RNA polymerase sigma factor sigD, chloroplastic | 9.3e-208 | 86.27 | Show/hide |
Query: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPE-TAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEES
MAT+SSLCSLP QSPTLPSISLSSLPSLKTHLPQQPHF PFSTKL NFI+NDTL PPP E AVLAVE AREHVLVE +S+ WSCKNLEKME+S
Subjt: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPE-TAVLAVEVAREHVLVEVR-VSEAWSCKNLEKMEES
Query: CGDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARES
CG G VAWKK+RRKRRKEVGE AEE+WVALSN PLRPG+LS KEEAELCLCLKEAAQ+EK KTRIMETQEHEPTNKQLAIAMG+KLG IDR+L RARES
Subjt: CGDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARES
Query: RDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLS
RDRLIRCYSKLVISIAAPYQGKG+SLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQ II+ALDKKSRL+RLPGHMGQMVA+IAEANNHLGIKLS
Subjt: RDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLS
Query: RQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEE
R PTHKEVA+ L V VSTVRLV+ER+KRPISINQPVNDRGCLTLQEIMPGPDNLTPENMV+RKLMKQELK+LLN+LSKREAHIL+LYFGLNG+IPQSFEE
Subjt: RQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEE
Query: IGKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
IGKSLNLSRET+R+ NIATL+KL K++ILDYLKDYLV
Subjt: IGKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 2.1e-47 | 32.87 | Show/hide |
Query: EAWSCKNLEKMEESCGDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLR--------PGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQ
+A K LEK + KK+R +EV NDPLR L+ +EE EL +++ +LE+ +T + E +PT Q
Subjt: EAWSCKNLEKMEESCGDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLR--------PGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQ
Query: LAIAMGSKLGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLP
A A G + + + +D++I+ +LVISIA YQG G++LQDL QEG GL++GAE+F+ +G K STYA+WWI+QA+ ++L +SR+IRLP
Subjt: LAIAMGSKLGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLP
Query: GHMGQMVARIAEANNHLGIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSK
HM + R+ EA L + + P ++E+AE+ + + + V K P S++Q + L E++ P+ +T E++++++ M+Q+L ++L+SL
Subjt: GHMGQMVARIAEANNHLGIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSK
Query: REAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
RE ++ FG+ ++ +EIG+ + +SRE VR+I + KL ++L+ YLV
Subjt: REAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
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| P26683 RNA polymerase sigma factor SigA | 2.6e-50 | 33.72 | Show/hide |
Query: EKMEESCGDDGVVAWKKKRRKRRKEVGEK-AEEDWVALSNDPL-RPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDR
E +E +D + K + +RR + +K ED + L + R L EE EL + + +LE+ + R+ E E +P + + A A+ L
Subjt: EKMEESCGDDGVVAWKKKRRKRRKEVGEK-AEEDWVALSNDPL-RPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDR
Query: ILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEAN
L R ++D++++ +LV+SIA Y +GLS QDL QEG++GL++ AE+F+ +G+K STYA WWIRQAI RA+ +SR IRLP H+ + ++RI +
Subjt: ILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEAN
Query: NHLGIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNG
L ++ R+PT +E+A + + + +R +++ ++ PIS+ P+ L + + D TPE+ V + L++++L+++L+SLS RE +L L +GL+
Subjt: NHLGIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNG
Query: EIPQSFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDYL
++ EEIG+ N++RE +R+I L KL + LK+Y+
Subjt: EIPQSFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDYL
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| P38023 RNA polymerase sigma factor SigA1 | 7.0e-51 | 34.41 | Show/hide |
Query: EESCGDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPL-RPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCR
E+S G+D A K K + R+ ED + L + R L EE EL + + LE+ + ++E + P++ + A A+ S L R L R
Subjt: EESCGDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPL-RPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCR
Query: ARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLG
R ++D++++ +LV+SIA Y +GLS QDL QEG++GL++ AE+F+ +G+K STYA WWIRQAI RA+ +SR IRLP H+ + ++RI + L
Subjt: ARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLG
Query: IKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQ
++ R+PT +E+A + + + +R +++ ++ PIS+ P+ L + + D TPE+ V + L++++L+ +L++LS RE +L L +GL+ +
Subjt: IKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQ
Query: SFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDYL
+ EEIG+ N++RE +R+I L KL + LK+Y+
Subjt: SFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDYL
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| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 4.0e-46 | 34.67 | Show/hide |
Query: DDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESRD
D+G V K +K+ K+ G ++ P L+ KEEAEL ++ +LEK KT++ EPT + A AMG + + R R SR+
Subjt: DDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESRD
Query: RLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSRQ
+LI +LV+ IA YQ +GL+ QDL QEG++GL+K E+F+P G + +TYAYWWIRQ+I +++ + SR IRLP ++ ++ +++EA + + +
Subjt: RLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSRQ
Query: PTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEIG
P+ +E+A + V + + ++ P+S+ QP+ T QEI P TP V ++LM+ ++ LLN LS +E I+ L FG++G +S EIG
Subjt: PTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEIG
Query: KSLNLSRETVRRINIATLSKLNK
+ LS+E VR++ L +L +
Subjt: KSLNLSRETVRRINIATLSKLNK
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| Q9ZSL6 RNA polymerase sigma factor sigD, chloroplastic | 7.9e-87 | 44.07 | Show/hide |
Query: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVRVSEAWSCKNLEKMEESCG
MAT+ + T P+ P ++S L TH Q PFS KL + + DT V V+++ E W
Subjt: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVRVSEAWSCKNLEKMEESCG
Query: DDGVVAWKKKRRKRRKEVG----EKAEEDWVALSND----------PLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLG
G+ + K+++R+RR+ VG E EE+ + + R G+LS EE +LCL LKE A+LE T + +E+E + LA G K
Subjt: DDGVVAWKKKRRKRRKEVG----EKAEEDWVALSND----------PLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLG
Query: CIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARI
+ ILCR +E+R+++ RCY +LV+SIA YQGKGL+LQDL QEG+IGLL+GAERF+P+RG+KLSTY YWWI+QAI+RA+ KSRL++LPG M ++ A++
Subjt: CIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARI
Query: AEANNHLGIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYF
AEA+N L KL RQP+ +E+AE LN++VS VRL ERS+ P+S+++ + G +TLQEI+ GPD PE MV R+ MK E+++LL SL+ RE+ +L LYF
Subjt: AEANNHLGIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYF
Query: GLNGEIPQSFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDY
GLNGE P SFEEIGKSL LSRE VR+IN L KL ++ LK Y
Subjt: GLNGEIPQSFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDY
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.5e-48 | 32.87 | Show/hide |
Query: EAWSCKNLEKMEESCGDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLR--------PGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQ
+A K LEK + KK+R +EV NDPLR L+ +EE EL +++ +LE+ +T + E +PT Q
Subjt: EAWSCKNLEKMEESCGDDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLR--------PGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQ
Query: LAIAMGSKLGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLP
A A G + + + +D++I+ +LVISIA YQG G++LQDL QEG GL++GAE+F+ +G K STYA+WWI+QA+ ++L +SR+IRLP
Subjt: LAIAMGSKLGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLP
Query: GHMGQMVARIAEANNHLGIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSK
HM + R+ EA L + + P ++E+AE+ + + + V K P S++Q + L E++ P+ +T E++++++ M+Q+L ++L+SL
Subjt: GHMGQMVARIAEANNHLGIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSK
Query: REAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
RE ++ FG+ ++ +EIG+ + +SRE VR+I + KL ++L+ YLV
Subjt: REAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDYLV
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| AT1G64860.1 sigma factor A | 1.0e-33 | 32.65 | Show/hide |
Query: LSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKG
LS E L +K +L+ K+R+ + EP+++QLA+++ + L +R++L +LV+SIA Y G + DL Q G IGLL+G
Subjt: LSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKG
Query: AERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRG
E+F+ ++G ++STY YWWIRQ + RAL SR +RLP H+ + + I A L K P+ +AESLN+ VR +E + S+ DR
Subjt: AERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRG
Query: CLTLQEIMPGPDNLT----------PENMVMRKLMKQELKRLLN-SLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRRINIATLSKL
+PG + + P + +K+E+ +L++ +L +RE I+ LY+GL+ E ++E+I K + LSRE VR++ + L KL
Subjt: CLTLQEIMPGPDNLT----------PENMVMRKLMKQELKRLLN-SLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRRINIATLSKL
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| AT2G36990.1 RNApolymerase sigma-subunit F | 2.8e-47 | 34.67 | Show/hide |
Query: DDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESRD
D+G V K +K+ K+ G ++ P L+ KEEAEL ++ +LEK KT++ EPT + A AMG + + R R SR+
Subjt: DDGVVAWKKKRRKRRKEVGEKAEEDWVALSNDPLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESRD
Query: RLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSRQ
+LI +LV+ IA YQ +GL+ QDL QEG++GL+K E+F+P G + +TYAYWWIRQ+I +++ + SR IRLP ++ ++ +++EA + + +
Subjt: RLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHLGIKLSRQ
Query: PTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEIG
P+ +E+A + V + + ++ P+S+ QP+ T QEI P TP V ++LM+ ++ LLN LS +E I+ L FG++G +S EIG
Subjt: PTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEIG
Query: KSLNLSRETVRRINIATLSKLNK
+ LS+E VR++ L +L +
Subjt: KSLNLSRETVRRINIATLSKLNK
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| AT3G53920.1 RNApolymerase sigma-subunit C | 7.4e-32 | 30.3 | Show/hide |
Query: KEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAER
+ E E+ +K A +E+ +T++ E + A A G + R L RD L++ LV+ +A Y+G G++ +DL Q G +G+L+GAER
Subjt: KEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAER
Query: FEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHL----GIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDR
F+ RG+K STY +WIR+++ + + +R + +P + + + I +A L GIK + +E+A+ V +R ++ K SI++ V D
Subjt: FEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARIAEANNHL----GIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDR
Query: GCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDYL
E P +PE VMR+ ++++ LL L RE ++ L +GL P+S EEIGK L +S+E +R+I ++KL + L+ YL
Subjt: GCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDYL
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| AT5G13730.1 sigma factor 4 | 5.6e-88 | 44.07 | Show/hide |
Query: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVRVSEAWSCKNLEKMEESCG
MAT+ + T P+ P ++S L TH Q PFS KL + + DT V V+++ E W
Subjt: MATSSSLCSLPTQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGSNFISNDTLALPPPPETAVLAVEVAREHVLVEVRVSEAWSCKNLEKMEESCG
Query: DDGVVAWKKKRRKRRKEVG----EKAEEDWVALSND----------PLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLG
G+ + K+++R+RR+ VG E EE+ + + R G+LS EE +LCL LKE A+LE T + +E+E + LA G K
Subjt: DDGVVAWKKKRRKRRKEVG----EKAEEDWVALSND----------PLRPGYLSPKEEAELCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGSKLG
Query: CIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARI
+ ILCR +E+R+++ RCY +LV+SIA YQGKGL+LQDL QEG+IGLL+GAERF+P+RG+KLSTY YWWI+QAI+RA+ KSRL++LPG M ++ A++
Subjt: CIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLIRLPGHMGQMVARI
Query: AEANNHLGIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYF
AEA+N L KL RQP+ +E+AE LN++VS VRL ERS+ P+S+++ + G +TLQEI+ GPD PE MV R+ MK E+++LL SL+ RE+ +L LYF
Subjt: AEANNHLGIKLSRQPTHKEVAESLNVHVSTVRLVSERSKRPISINQPVNDRGCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNSLSKREAHILSLYF
Query: GLNGEIPQSFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDY
GLNGE P SFEEIGKSL LSRE VR+IN L KL ++ LK Y
Subjt: GLNGEIPQSFEEIGKSLNLSRETVRRINIATLSKLNKTDILDYLKDY
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