CuGenDBv2

Gene ID	Tan0021639
Organism	Trichosanthes anguina (Snake gourd v1)
Description	mediator of RNA polymerase II transcription subunit 27
Genome location	LG08:66040409..66044697
RNA-Seq Expression	Tan0021639
Synteny	Tan0021639
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0016592 - mediator complex (cellular component) GO:0003713 - transcription coactivator activity (molecular function)
InterPro domains	IPR021627 - Mediator complex, subunit Med27

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7028152.1 Mediator of RNA polymerase II transcription subunit 27 [Cucurbita argyrosperma subsp. argyrosperma]

4.6e-214

83.4

Show/hide

Query:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQ PAQGLTATVSPTT   HSSGS EEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLL+LRAVGKQ
Subjt:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN
        LEESGVLS+SLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP  KKPCFSHGVT +KQEELN
Subjt:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN

Query:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA
        DS SLSDIL CMEKEVPDLKIFTYERLDWLKQASALPSQANEN IG+LKEHNYHSPRMSPRSL AT  DKAAVIELIIPSV RAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA

Query:  ----------------------FFSPDERGSHVHARGFSNYHLFRHVT------------------------------EHAATVLQYFIGIQAKEALHPL
                              FFSPDERGSHVHARGFSN+HLFRHVT                              EHAATVLQYFIGIQAK ALHPL
Subjt:  ----------------------FFSPDERGSHVHARGFSNYHLFRHVT------------------------------EHAATVLQYFIGIQAKEALHPL

Query:  LLWICSYQNLFSKACS--KCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGCFSE
        LLWICSYQNLFSKAC   KCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGCF+E
Subjt:  LLWICSYQNLFSKACS--KCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGCFSE

XP_022940393.1 mediator of RNA polymerase II transcription subunit 27 [Cucurbita moschata]

9.9e-225

94.31

Show/hide

Query:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQ PAQGLTATVSPTT   HSSGS EEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN
        LEESGVLS+SLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP  KKPCFSHGVT +KQEELN
Subjt:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN

Query:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA
        DS SLSDIL CMEKEVPDLKIFTYERLDWLKQASALPSQANEN IG+LKEHNYHSPRMSPRSL AT  DKAAVIELIIPSV RAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGSHVHARGFSN+HLFRHVTEHAATVLQYFIGIQAK ALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISS VP
Subjt:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  VTSLKDQKLDSVQAFHIGCFSE
        VTSLKDQKLDSVQAFHIGCF+E
Subjt:  VTSLKDQKLDSVQAFHIGCFSE

XP_023005694.1 mediator of RNA polymerase II transcription subunit 27 [Cucurbita maxima]

9.9e-225

94.31

Show/hide

Query:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQ PAQGLTATVSPTT   HSSGS EEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN
        LEESGVLS+SLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP  KKPCFSHGVT +KQEELN
Subjt:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN

Query:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA
        DS SLSDIL CMEKEVPDLKIFTYERLDWLKQAS LPSQANEN IG+LKEHNYHSPRMSPRSL AT  DKAAVIELIIPSV RAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGSHVHARGFSN+HLFRHVTEHAATVLQYFIGIQAK ALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
Subjt:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  VTSLKDQKLDSVQAFHIGCFSE
        VTSLKDQKLDSVQAFHIGCF+E
Subjt:  VTSLKDQKLDSVQAFHIGCFSE

XP_023539656.1 mediator of RNA polymerase II transcription subunit 27 [Cucurbita pepo subsp. pepo]

9.9e-225

94.55

Show/hide

Query:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQ PAQGLTATVSPTT   HSSGS EEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN
        LEESGVLS+SLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP  KKPCFSHGVT +KQEELN
Subjt:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN

Query:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA
        DS SLSDIL C+EKEVPDLKIFTYERLDWLKQASAL SQANEN IG+LKEHNYHSPRMSPRSL AT  DKAAVIELIIPSV RAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGSHVHARGFSN+HLFRHVTEHAATVLQYFIGIQAK ALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
Subjt:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  VTSLKDQKLDSVQAFHIGCFSE
        VTSLKDQKLDSVQAFHIGCF+E
Subjt:  VTSLKDQKLDSVQAFHIGCFSE

XP_038904949.1 mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida]

7.4e-220

91.04

Show/hide

Query:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQQPAQG TATVSP TAPPHS  S ++APPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN
        LEESGVLS+SLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DENGSN EP LKKPCFSHGVT +KQ ELN
Subjt:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN

Query:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA
        DSRSLS+IL CMEKEVP+LKIFTYERLDWLKQASALPSQANEN IG LKEH+YHSPRMSP SLGATP DKA VIEL+IPSV RAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGSHVHARGFSN+HLFRHVTEHAATVLQYF+G QAK AL+PLLLWICSYQNLFSKACSKCG+LLSVNKQSDLLLPPA+RPYKQFC SK SS+VP
Subjt:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  VTSLKDQKLDSVQAFHIGCFSEEL
        +TSLKDQKLDSVQAFHI CFS EL
Subjt:  VTSLKDQKLDSVQAFHIGCFSEEL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGT1 Uncharacterized protein

1.1e-213

89.15

Show/hide

Query:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MR  QQP+QG TATVSP+T   HS  S ++APPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQS+KPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN
        LEESGVLS+SLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DEN SN EP LKKPCFSHGVT +KQ EL 
Subjt:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN

Query:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA
        DSRSLSDIL CMEKEVP+LKIFTYERLDWLKQASALPSQANEN IG+LKEH+YHSPRMSP +LGATPADKA VIELIIPSV RAVVSLHPVGSVEPDA+A
Subjt:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYF+G Q K AL+PLLLWICSYQNLFSKACSKCGR LSVNKQSDLLLPPA+RPYKQFC SK SS VP
Subjt:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  VTSLKDQKLDSVQAFHIGCFSEEL
        +TSLKDQKLDSVQAFHI CFSEE+
Subjt:  VTSLKDQKLDSVQAFHIGCFSEEL

A0A1S3B7L6 mediator of RNA polymerase II transcription subunit 27

4.2e-213

88.44

Show/hide

Query:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MR  QQP+QG TATVSP T   HS  S ++APPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQS+KPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN
        LEESGVLS+SLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DEN SN EP LKKPCFSHGVT +KQ EL 
Subjt:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN

Query:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA
        DSRSLSDIL C+EKEVP+LKIFTYERLDWLKQASALPSQANEN IG+LKEH+YHSPRMSP +LGATPADKA VIELIIPSV RAVVSLHP+GSVEPDA+A
Subjt:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGSHVHARGFSNYH+FRHVTEHAATVLQYF+G Q K AL+PLLLWICSYQNLFSKACSKCGR LSVNKQSDLLLPP +RPYKQFC SK SSAVP
Subjt:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  VTSLKDQKLDSVQAFHIGCFSEEL
        +TSLKDQKLDSVQAFHI CFSEE+
Subjt:  VTSLKDQKLDSVQAFHIGCFSEEL

A0A6J1DC62 mediator of RNA polymerase II transcription subunit 27

2.1e-212

88.21

Show/hide

Query:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQQPAQG TATVSP TA PHS GS EEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTA PHQSTKPLHLFQKED SMRQHL DLRAVGKQ
Subjt:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN
        LEESGVLS+SLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDE+  N+EP LKKPCFSHGVT IKQ+ELN
Subjt:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN

Query:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA
        + R+LSDIL CMEKEVPDLKIFTYERLDWLKQA AL SQAN+N IG+LKEHNYHSPRM P SL A+  DK +VIELIIPSV RAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FF+PDERGS+VHARGFS +HLFRHVTEHAATVLQYF+GIQ K AL+PLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTS++ SAVP
Subjt:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  VTSLKDQKLDSVQAFHIGCFSEEL
        ++SLKDQ+ D VQAFHIGCFSEEL
Subjt:  VTSLKDQKLDSVQAFHIGCFSEEL

A0A6J1FP59 mediator of RNA polymerase II transcription subunit 27

4.8e-225

94.31

Show/hide

Query:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQ PAQGLTATVSPTT   HSSGS EEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN
        LEESGVLS+SLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP  KKPCFSHGVT +KQEELN
Subjt:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN

Query:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA
        DS SLSDIL CMEKEVPDLKIFTYERLDWLKQASALPSQANEN IG+LKEHNYHSPRMSPRSL AT  DKAAVIELIIPSV RAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGSHVHARGFSN+HLFRHVTEHAATVLQYFIGIQAK ALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISS VP
Subjt:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  VTSLKDQKLDSVQAFHIGCFSE
        VTSLKDQKLDSVQAFHIGCF+E
Subjt:  VTSLKDQKLDSVQAFHIGCFSE

A0A6J1KZZ9 mediator of RNA polymerase II transcription subunit 27

4.8e-225

94.31

Show/hide

Query:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQ PAQGLTATVSPTT   HSSGS EEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN
        LEESGVLS+SLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP  KKPCFSHGVT +KQEELN
Subjt:  LEESGVLSQSLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELN

Query:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA
        DS SLSDIL CMEKEVPDLKIFTYERLDWLKQAS LPSQANEN IG+LKEHNYHSPRMSPRSL AT  DKAAVIELIIPSV RAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILKCMEKEVPDLKIFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGSHVHARGFSN+HLFRHVTEHAATVLQYFIGIQAK ALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
Subjt:  FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  VTSLKDQKLDSVQAFHIGCFSE
        VTSLKDQKLDSVQAFHIGCF+E
Subjt:  VTSLKDQKLDSVQAFHIGCFSE

SwissProt top hits

e value

%identity

Alignment

Q8RWM3 Mediator of RNA polymerase II transcription subunit 27

3.9e-123

58.69

Show/hide

Query:  SVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSQSLLSRSNSWGLHMPLVC
        S  +APPKQVA AM+RL  AAR+IADIRLGADR+LEA+ V +QP  +  PL LF +EDASMRQHL DLR +GK+LEESGVL++SL SRSNSWGLHMPLVC
Subjt:  SVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSQSLLSRSNSWGLHMPLVC

Query:  PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELNDSRSLSDILKCMEKEVPDLKIFTYER
        PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPH+DD  G  +EP  KK   SH +    +EE  D ++L DI   +EK VP +K+ TY R
Subjt:  PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELNDSRSLSDILKCMEKEVPDLKIFTYER

Query:  LDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFSNYHLFRHVT
        L+WLK+A++LP   +++P  + K     S ++    L     DK AVIEL  PS+ RA+VSL P GSV+PDAVAFFSPDE GS++HARGFS YH+++H+T
Subjt:  LDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFSNYHLFRHVT

Query:  EHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGCFSEE
        EHAAT LQYF+G     AL+ LLLWICS++++FSK C+KCGRLL+++K+S L+LPP  R Y++         +P+       LD  +A+H  C  ++
Subjt:  EHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGCFSEE

Arabidopsis top hits

e value

%identity

Alignment

AT3G09180.1 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627); Has 112 Blast hits to 112 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).

2.8e-124

58.69

Show/hide

Query:  SVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSQSLLSRSNSWGLHMPLVC
        S  +APPKQVA AM+RL  AAR+IADIRLGADR+LEA+ V +QP  +  PL LF +EDASMRQHL DLR +GK+LEESGVL++SL SRSNSWGLHMPLVC
Subjt:  SVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSQSLLSRSNSWGLHMPLVC

Query:  PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELNDSRSLSDILKCMEKEVPDLKIFTYER
        PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPH+DD  G  +EP  KK   SH +    +EE  D ++L DI   +EK VP +K+ TY R
Subjt:  PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELNDSRSLSDILKCMEKEVPDLKIFTYER

Query:  LDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFSNYHLFRHVT
        L+WLK+A++LP   +++P  + K     S ++    L     DK AVIEL  PS+ RA+VSL P GSV+PDAVAFFSPDE GS++HARGFS YH+++H+T
Subjt:  LDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFSNYHLFRHVT

Query:  EHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGCFSEE
        EHAAT LQYF+G     AL+ LLLWICS++++FSK C+KCGRLL+++K+S L+LPP  R Y++         +P+       LD  +A+H  C  ++
Subjt:  EHAATVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGCFSEE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGACAGACGCAGCAGCCAGCGCAGGGCCTGACTGCGACGGTGAGCCCTACCACTGCTCCGCCTCACTCTTCCGGCTCCGTGGAGGAGGCGCCGCCGAAGCAGGTTGC
TCTCGCCATGGACAGACTCGGCCACGCTGCTCGCCTCATCGCCGACATCAGACTCGGCGCCGATCGCCTTCTCGAAGCCCTCTGCGTCACTGCCCAGCCTCATCAGAGCA
CCAAGCCTCTCCACTTGTTTCAGAAAGAAGATGCTTCCATGCGACAACACCTTCTTGACCTTCGTGCAGTTGGAAAGCAGCTTGAAGAGTCGGGTGTTCTCAGTCAATCT
CTTCTGTCGAGAAGTAATTCTTGGGGTCTACATATGCCTTTAGTGTGTCCTGATGGGGCAGTGGTTGCCTATGCATGGAAACGTCAATTAGCTGGCCAGGCTGGTGCATC
CGCAGTTGACAGAACCAGGTTAGCTCTAAAGGCCTTCACTGACCAGAAAAGACGGTTTTTCCCTCATCTTGATGATGAAAATGGGTCGAATATTGAGCCTGTTCTGAAGA
AGCCCTGTTTTTCTCATGGAGTGACAGGTATTAAACAAGAGGAGCTTAATGATTCTAGATCACTCTCAGATATTCTAAAATGTATGGAAAAGGAAGTACCAGACCTTAAG
ATTTTCACTTATGAGAGATTGGACTGGTTGAAACAAGCTTCAGCACTTCCCTCACAAGCAAATGAGAATCCCATAGGATCATTGAAAGAACATAACTATCATAGTCCTAG
GATGAGCCCCAGATCACTTGGTGCTACTCCTGCAGATAAAGCTGCTGTGATTGAGTTGATCATCCCTTCTGTCTTGAGAGCCGTAGTATCACTACATCCAGTTGGTTCTG
TTGAACCAGATGCTGTGGCCTTCTTTTCTCCTGATGAGAGAGGCAGCCATGTACATGCCAGGGGGTTTTCAAATTATCATTTGTTTAGACATGTGACGGAGCATGCTGCC
ACTGTGCTGCAGTATTTTATTGGAATTCAAGCAAAGGAAGCTCTACATCCTCTATTGCTTTGGATCTGTAGCTACCAAAATTTATTTTCAAAAGCTTGTAGTAAATGTGG
ACGTCTACTATCAGTAAACAAACAATCAGATTTACTGTTACCTCCTGCAATTCGCCCGTACAAGCAGTTTTGTACATCAAAAATCTCATCAGCTGTGCCCGTAACCTCAT
TGAAAGACCAGAAGTTGGATTCTGTTCAGGCTTTCCACATCGGTTGCTTCTCAGAAGAACTATAG

mRNA sequence

Show/hide mRNA sequence

GGAAATACTGCAAGTAGCAGTCGTCTTGGTCACACCTTCCAGAGGCTTTTGGGGAAAGAAATCGAAAGCAGTAAACATCGGCGGAGGGTAAATGCGACAGACGCAGCAGC
CAGCGCAGGGCCTGACTGCGACGGTGAGCCCTACCACTGCTCCGCCTCACTCTTCCGGCTCCGTGGAGGAGGCGCCGCCGAAGCAGGTTGCTCTCGCCATGGACAGACTC
GGCCACGCTGCTCGCCTCATCGCCGACATCAGACTCGGCGCCGATCGCCTTCTCGAAGCCCTCTGCGTCACTGCCCAGCCTCATCAGAGCACCAAGCCTCTCCACTTGTT
TCAGAAAGAAGATGCTTCCATGCGACAACACCTTCTTGACCTTCGTGCAGTTGGAAAGCAGCTTGAAGAGTCGGGTGTTCTCAGTCAATCTCTTCTGTCGAGAAGTAATT
CTTGGGGTCTACATATGCCTTTAGTGTGTCCTGATGGGGCAGTGGTTGCCTATGCATGGAAACGTCAATTAGCTGGCCAGGCTGGTGCATCCGCAGTTGACAGAACCAGG
TTAGCTCTAAAGGCCTTCACTGACCAGAAAAGACGGTTTTTCCCTCATCTTGATGATGAAAATGGGTCGAATATTGAGCCTGTTCTGAAGAAGCCCTGTTTTTCTCATGG
AGTGACAGGTATTAAACAAGAGGAGCTTAATGATTCTAGATCACTCTCAGATATTCTAAAATGTATGGAAAAGGAAGTACCAGACCTTAAGATTTTCACTTATGAGAGAT
TGGACTGGTTGAAACAAGCTTCAGCACTTCCCTCACAAGCAAATGAGAATCCCATAGGATCATTGAAAGAACATAACTATCATAGTCCTAGGATGAGCCCCAGATCACTT
GGTGCTACTCCTGCAGATAAAGCTGCTGTGATTGAGTTGATCATCCCTTCTGTCTTGAGAGCCGTAGTATCACTACATCCAGTTGGTTCTGTTGAACCAGATGCTGTGGC
CTTCTTTTCTCCTGATGAGAGAGGCAGCCATGTACATGCCAGGGGGTTTTCAAATTATCATTTGTTTAGACATGTGACGGAGCATGCTGCCACTGTGCTGCAGTATTTTA
TTGGAATTCAAGCAAAGGAAGCTCTACATCCTCTATTGCTTTGGATCTGTAGCTACCAAAATTTATTTTCAAAAGCTTGTAGTAAATGTGGACGTCTACTATCAGTAAAC
AAACAATCAGATTTACTGTTACCTCCTGCAATTCGCCCGTACAAGCAGTTTTGTACATCAAAAATCTCATCAGCTGTGCCCGTAACCTCATTGAAAGACCAGAAGTTGGA
TTCTGTTCAGGCTTTCCACATCGGTTGCTTCTCAGAAGAACTATAGTCACACCTAGCTGAACGGGTACTCACACCTAGCTGAACAGGGCCTTGTGGACTCTGATTCCCAT
GTTATATGATATGGGTATTCTCCATGAATTAGTATGCTCATAATCAGAAGAGGACGCAGCCTGTGTTGGTGATTCACTACCCTGTGCATTATATTTCATTTGAGGTGACA
TGCTACGGAAAAATCTCATTTGTAAATTGTAATGCACTGTGTTCCTTCGGGGACATCCGATTAGATTGTGTCATGCAGTGTTGCAAATACATGACAAGGAGTGATATTCA
GATTATTCATAGGTGTCCATCGTGATGTGATGCCAAGAGAACCATCAAGTTTCTGAAGTGGTTAGTTTCTGTTGGCTGAAGTAGCTTGCCTTCGTCAAGTCAAGCAAAGG
TCATTTGCTTTGATTTGAGAAATTGCTAGCTCCTTAATCTTTTCAGAAGATACGCTTGATTTTGGAAACATTTGTATCTTGCCCCTTCAAATTCAAGTTCGAATGTTAGC
CTTTTATTAGTATTTACCAATGGTCTTGGGGGCAAGGCCATTTAGTTAAGTGCTCCATGAAGAATGCATTTACTTTTTCTAATATTATCTTGTTCTGTACTAATTGCAGC
TCTTCCACGTAACTTTGCTGTCAGTGTATTCTTATTATTTCAGTTAGCAAGAAATTTTGGAAACGACTCTCTTCCTGTAAGGGGGACCATTTGTTTGGAAGGTTGAAGCA
GCTTGTTGTTAAAAGATTCCAACTTTACTACACTTTCTACTTGCAGCAGGTAAGCTTCTCTTACAAGAAGCTTACTTTTTGTGGTATGGGATGTTTTGTTTTTATCTTTT
TAAGGTTAAATTACAAGTTTAGTCTATGAAATTTTCAGGTTTGTTTATTAGGTCCCTAAATTTTAAAAAGTGTCTAATGAGTC

Protein sequence

Show/hide protein sequence

MRQTQQPAQGLTATVSPTTAPPHSSGSVEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSQS
LLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTGIKQEELNDSRSLSDILKCMEKEVPDLK
IFTYERLDWLKQASALPSQANENPIGSLKEHNYHSPRMSPRSLGATPADKAAVIELIIPSVLRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFSNYHLFRHVTEHAA
TVLQYFIGIQAKEALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGCFSEEL

Tan0021639 (gene) of Snake gourd v1 genome