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Tan0021644 (gene) of Snake gourd v1 genome

Gene IDTan0021644
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG08:37372502..37372810
RNA-Seq ExpressionTan0021644
SyntenyTan0021644
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-3477.45Show/hide
Query:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN
        M+T +EIM SLQ MFGQ    + HDALKYI N+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQFR+NAVMNKI Y +TTLLN
Subjt:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN

Query:  EL
        EL
Subjt:  EL
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-3477.45Show/hide
Query:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN
        M+T +EIM SLQ MFGQ    + HDALKYI N+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQFR+NAVMNKI Y +TTLLN
Subjt:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN

Query:  EL
        EL
Subjt:  EL
KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-3477.45Show/hide
Query:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN
        M+T +EIM SLQ MFGQ    + HDALKYI N+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQFR+NAVMNKI Y +TTLLN
Subjt:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN

Query:  EL
        EL
Subjt:  EL
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-3477.45Show/hide
Query:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN
        M+T +EIM SLQ MFGQ    + HDALKYI N+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQFR+NAVMNKI Y +TTLLN
Subjt:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN

Query:  EL
        EL
Subjt:  EL
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-3477.45Show/hide
Query:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN
        M+T +EIM SLQ MFGQ    + HDALKYI N+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQFR+NAVMNKI Y +TTLLN
Subjt:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN

Query:  EL
        EL
Subjt:  EL
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.1e-3477.45Show/hide
Query:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN
        M+T +EIM SLQ MFGQ    + HDALKYI N+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQFR+NAVMNKI Y +TTLLN
Subjt:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN

Query:  EL
        EL
Subjt:  EL
A0A5A7TU93 Gag/pol protein1.1e-3477.45Show/hide
Query:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN
        M+T +EIM SLQ MFGQ    + HDALKYI N+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQFR+NAVMNKI Y +TTLLN
Subjt:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN

Query:  EL
        EL
Subjt:  EL
A0A5A7TWB9 Gag/pol protein1.1e-3477.45Show/hide
Query:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN
        M+T +EIM SLQ MFGQ    + HDALKYI N+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQFR+NAVMNKI Y +TTLLN
Subjt:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN

Query:  EL
        EL
Subjt:  EL
A0A5A7V4M1 Gag/pol protein1.1e-3477.45Show/hide
Query:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN
        M+T +EIM SLQ MFGQ    + HDALKYI N+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQFR+NAVMNKI Y +TTLLN
Subjt:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN

Query:  EL
        EL
Subjt:  EL
A0A5D3CPJ6 Gag/pol protein1.1e-3477.45Show/hide
Query:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN
        M+T +EIM SLQ MFGQ    + HDALKYI N+RM EGASVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQFR+NAVMNKI Y +TTLLN
Subjt:  MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLN

Query:  EL
        EL
Subjt:  EL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCACCACAAAGGAGATCATGGGATCATTGCAGGCCATGTTTGGACAACCGTTCTCATCGGTCTGCCATGATGCTCTCAAATACATTTGCAACTCCCGTATGAAGGA
GGGAGCTTCTGTTAGGGAACATGTCCTTAACATGATGGTCCACTTCAACGTGGCAGAAGTAAACGGGGTTGTCATAGATGAGAAGAGTCAGGTTAGCTTTATTATGGAAT
CTCTTCCGAAGAGTTTCCTGCAATTCCGCACCAATGCGGTTATGAATAAAATAGAGTATAACATGACCACTTTACTCAATGAGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCACCACAAAGGAGATCATGGGATCATTGCAGGCCATGTTTGGACAACCGTTCTCATCGGTCTGCCATGATGCTCTCAAATACATTTGCAACTCCCGTATGAAGGA
GGGAGCTTCTGTTAGGGAACATGTCCTTAACATGATGGTCCACTTCAACGTGGCAGAAGTAAACGGGGTTGTCATAGATGAGAAGAGTCAGGTTAGCTTTATTATGGAAT
CTCTTCCGAAGAGTTTCCTGCAATTCCGCACCAATGCGGTTATGAATAAAATAGAGTATAACATGACCACTTTACTCAATGAGCTTTAG
Protein sequenceShow/hide protein sequence
MVTTKEIMGSLQAMFGQPFSSVCHDALKYICNSRMKEGASVREHVLNMMVHFNVAEVNGVVIDEKSQVSFIMESLPKSFLQFRTNAVMNKIEYNMTTLLNEL