| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-159 | 54.33 | Show/hide |
Query: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
+S+VLAKKHE M+TA EIM+SLQEMFGQ S Q++HD+LKY++NA M EG+SVREHVL+ M HFN+AEMNGA IDE+S
Subjt: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
Query: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Q F+SL ++K K EANVA R +HRGSTS TK + S K + +G K + A A KKA+
Subjt: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Query: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
L K+ + D I+ + +GI SW+ L+ GE+T+RVG+G +VSA A+ ++L S++LL+N+Y+V R
Subjt: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
Query: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
NL S+ CLLEQ S++F NK FI +NG ICSA LE+NLYVL+ + K++LNT++FKTA T K+ K+SPKENA+LWHLRLGHINL RIE+LVK+GLL+
Subjt: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
Query: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
ELEEN L VCESCL MTKRPF+GKG+RAKEPL+LVHSDLC PMNVKARGG+EYF++F DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT
Subjt: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
Query: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
RSDRGGEYMD +FQ+Y++E I SQLSAPG PQQNGVSER+N++LLDMVRSM SYA LP+SFWGYAV+TAVYILN V SKSV ETP +L
Subjt: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
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| KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-159 | 54.33 | Show/hide |
Query: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
+S+VLAKKHE M+TA EIM+SLQEMFGQ S Q++HD+LKY++NA M EG+SVREHVL+ M HFN+AEMNGA IDE+S
Subjt: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
Query: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Q F+SL ++K K EANVA R +HRGSTS TK + S K + +G K + A A KKA+
Subjt: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Query: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
L K+ + D I+ + +GI SW+ L+ GE+T+RVG+G +VSA A+ ++L S++LL+N+Y+V R
Subjt: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
Query: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
NL S+ CLLEQ S++F NK FI +NG ICSA LE+NLYVL+ + K++LNT++FKTA T K+ K+SPKENA+LWHLRLGHINL RIE+LVK+GLL+
Subjt: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
Query: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
ELEEN L VCESCL MTKRPF+GKG+RAKEPL+LVHSDLC PMNVKARGG+EYF++F DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT
Subjt: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
Query: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
RSDRGGEYMD +FQ+Y++E I SQLSAPG PQQNGVSER+N++LLDMVRSM SYA LP+SFWGYAV+TAVYILN V SKSV ETP +L
Subjt: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-159 | 54.33 | Show/hide |
Query: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
+S+VLAKKHE M+TA EIM+SLQEMFGQ S Q++HD+LKY++NA M EG+SVREHVL+ M HFN+AEMNGA IDE+S
Subjt: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
Query: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Q F+SL ++K K EANVA R +HRGSTS TK + S K + +G K + A A KKA+
Subjt: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Query: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
L K+ + D I+ + +GI SW+ L+ GE+T+RVG+G +VSA A+ ++L S++LL+N+Y+V R
Subjt: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
Query: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
NL S+ CLLEQ S++F NK FI +NG ICSA LE+NLYVL+ + K++LNT++FKTA T K+ K+SPKENA+LWHLRLGHINL RIE+LVK+GLL+
Subjt: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
Query: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
ELEEN L VCESCL MTKRPF+GKG+RAKEPL+LVHSDLC PMNVKARGG+EYF++F DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT
Subjt: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
Query: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
RSDRGGEYMD +FQ+Y++E I SQLSAPG PQQNGVSER+N++LLDMVRSM SYA LP+SFWGYAV+TAVYILN V SKSV ETP +L
Subjt: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-159 | 54.33 | Show/hide |
Query: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
+S+VLAKKHE M+TA EIM+SLQEMFGQ S Q++HD+LKY++NA M EG+SVREHVL+ M HFN+AEMNGA IDE+S
Subjt: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
Query: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Q F+SL ++K K EANVA R +HRGSTS TK + S K + +G K + A A KKA+
Subjt: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Query: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
L K+ + D I+ + +GI SW+ L+ GE+T+RVG+G +VSA A+ ++L S++LL+N+Y+V R
Subjt: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
Query: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
NL S+ CLLEQ S++F NK FI +NG ICSA LE+NLYVL+ + K++LNT++FKTA T K+ K+SPKENA+LWHLRLGHINL RIE+LVK+GLL+
Subjt: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
Query: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
ELEEN L VCESCL MTKRPF+GKG+RAKEPL+LVHSDLC PMNVKARGG+EYF++F DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT
Subjt: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
Query: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
RSDRGGEYMD +FQ+Y++E I SQLSAPG PQQNGVSER+N++LLDMVRSM SYA LP+SFWGYAV+TAVYILN V SKSV ETP +L
Subjt: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
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| KAA0062993.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-159 | 54.33 | Show/hide |
Query: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
+S+VLAKKHE M+TA EIM+SLQEMFGQ S Q++HD+LKY++NA M EG+SVREHVL+ M HFN+AEMNGA IDE+S
Subjt: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
Query: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Q F+SL ++K K EANVA R +HRGSTS TK + S K + +G K + A A KKA+
Subjt: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Query: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
L K+ + D I+ + +GI SW+ L+ GE+T+RVG+G +VSA A+ ++L S++LL+N+Y+V R
Subjt: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
Query: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
NL S+ CLLEQ S++F NK FI +NG ICSA LE+NLYVL+ + K++LNT++FKTA T K+ K+SPKENA+LWHLRLGHINL RIE+LVK+GLL+
Subjt: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
Query: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
ELEEN L VCESCL MTKRPF+GKG+RAKEPL+LVHSDLC PMNVKARGG+EYF++F DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT
Subjt: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
Query: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
RSDRGGEYMD +FQ+Y++E I SQLSAPG PQQNGVSER+N++LLDMVRSM SYA LP+SFWGYAV+TAVYILN V SKSV ETP +L
Subjt: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 8.5e-160 | 54.33 | Show/hide |
Query: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
+S+VLAKKHE M+TA EIM+SLQEMFGQ S Q++HD+LKY++NA M EG+SVREHVL+ M HFN+AEMNGA IDE+S
Subjt: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
Query: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Q F+SL ++K K EANVA R +HRGSTS TK + S K + +G K + A A KKA+
Subjt: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Query: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
L K+ + D I+ + +GI SW+ L+ GE+T+RVG+G +VSA A+ ++L S++LL+N+Y+V R
Subjt: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
Query: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
NL S+ CLLEQ S++F NK FI +NG ICSA LE+NLYVL+ + K++LNT++FKTA T K+ K+SPKENA+LWHLRLGHINL RIE+LVK+GLL+
Subjt: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
Query: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
ELEEN L VCESCL MTKRPF+GKG+RAKEPL+LVHSDLC PMNVKARGG+EYF++F DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT
Subjt: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
Query: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
RSDRGGEYMD +FQ+Y++E I SQLSAPG PQQNGVSER+N++LLDMVRSM SYA LP+SFWGYAV+TAVYILN V SKSV ETP +L
Subjt: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
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| A0A5A7TWB9 Gag/pol protein | 8.5e-160 | 54.33 | Show/hide |
Query: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
+S+VLAKKHE M+TA EIM+SLQEMFGQ S Q++HD+LKY++NA M EG+SVREHVL+ M HFN+AEMNGA IDE+S
Subjt: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
Query: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Q F+SL ++K K EANVA R +HRGSTS TK + S K + +G K + A A KKA+
Subjt: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Query: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
L K+ + D I+ + +GI SW+ L+ GE+T+RVG+G +VSA A+ ++L S++LL+N+Y+V R
Subjt: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
Query: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
NL S+ CLLEQ S++F NK FI +NG ICSA LE+NLYVL+ + K++LNT++FKTA T K+ K+SPKENA+LWHLRLGHINL RIE+LVK+GLL+
Subjt: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
Query: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
ELEEN L VCESCL MTKRPF+GKG+RAKEPL+LVHSDLC PMNVKARGG+EYF++F DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT
Subjt: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
Query: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
RSDRGGEYMD +FQ+Y++E I SQLSAPG PQQNGVSER+N++LLDMVRSM SYA LP+SFWGYAV+TAVYILN V SKSV ETP +L
Subjt: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
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| A0A5A7TZD7 Gag/pol protein | 8.5e-160 | 54.33 | Show/hide |
Query: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
+S+VLAKKHE M+TA EIM+SLQEMFGQ S Q++HD+LKY++NA M EG+SVREHVL+ M HFN+AEMNGA IDE+S
Subjt: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
Query: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Q F+SL ++K K EANVA R +HRGSTS TK + S K + +G K + A A KKA+
Subjt: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Query: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
L K+ + D I+ + +GI SW+ L+ GE+T+RVG+G +VSA A+ ++L S++LL+N+Y+V R
Subjt: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
Query: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
NL S+ CLLEQ S++F NK FI +NG ICSA LE+NLYVL+ + K++LNT++FKTA T K+ K+SPKENA+LWHLRLGHINL RIE+LVK+GLL+
Subjt: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
Query: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
ELEEN L VCESCL MTKRPF+GKG+RAKEPL+LVHSDLC PMNVKARGG+EYF++F DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT
Subjt: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
Query: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
RSDRGGEYMD +FQ+Y++E I SQLSAPG PQQNGVSER+N++LLDMVRSM SYA LP+SFWGYAV+TAVYILN V SKSV ETP +L
Subjt: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
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| A0A5A7UGV2 Gag/pol protein | 8.5e-160 | 54.33 | Show/hide |
Query: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
+S+VLAKKHE M+TA EIM+SLQEMFGQ S Q++HD+LKY++NA M EG+SVREHVL+ M HFN+AEMNGA IDE+S
Subjt: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
Query: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Q F+SL ++K K EANVA R +HRGSTS TK + S K + +G K + A A KKA+
Subjt: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Query: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
L K+ + D I+ + +GI SW+ L+ GE+T+RVG+G +VSA A+ ++L S++LL+N+Y+V R
Subjt: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
Query: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
NL S+ CLLEQ S++F NK FI +NG ICSA LE+NLYVL+ + K++LNT++FKTA T K+ K+SPKENA+LWHLRLGHINL RIE+LVK+GLL+
Subjt: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
Query: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
ELEEN L VCESCL MTKRPF+GKG+RAKEPL+LVHSDLC PMNVKARGG+EYF++F DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT
Subjt: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
Query: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
RSDRGGEYMD +FQ+Y++E I SQLSAPG PQQNGVSER+N++LLDMVRSM SYA LP+SFWGYAV+TAVYILN V SKSV ETP +L
Subjt: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
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| A0A5A7V4M1 Gag/pol protein | 8.5e-160 | 54.33 | Show/hide |
Query: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
+S+VLAKKHE M+TA EIM+SLQEMFGQ S Q++HD+LKY++NA M EG+SVREHVL+ M HFN+AEMNGA IDE+S
Subjt: MSDVLAKKHELMVTANEIMESLQEMFGQQSIQVRHDSLKYVFNAWMKEGSSVREHVLDTMTHFNLAEMNGASIDESS-----------------------
Query: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Q F+SL ++K K EANVA R +HRGSTS TK + S K + +G K + A A KKA+
Subjt: -------------QNFQSLNRVKASKFEANVA--YRSYHRGSTSRTKPVAPSRPKGKKRMTRG----KTDRAVAHKGKKART------------------
Query: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
L K+ + D I+ + +GI SW+ L+ GE+T+RVG+G +VSA A+ ++L S++LL+N+Y+V R
Subjt: ---LQRKESVSTS-----------MGADTGRGIVPNSLPR---GRIKGIDSWQPLQEGEVTLRVGSGELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTR
Query: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
NL S+ CLLEQ S++F NK FI +NG ICSA LE+NLYVL+ + K++LNT++FKTA T K+ K+SPKENA+LWHLRLGHINL RIE+LVK+GLL+
Subjt: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLN
Query: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
ELEEN L VCESCL MTKRPF+GKG+RAKEPL+LVHSDLC PMNVKARGG+EYF++F DYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT
Subjt: ELEENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTL
Query: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
RSDRGGEYMD +FQ+Y++E I SQLSAPG PQQNGVSER+N++LLDMVRSM SYA LP+SFWGYAV+TAVYILN V SKSV ETP +L
Subjt: RSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLSKSVCETPFEL
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 6.5e-32 | 30.24 | Show/hide |
Query: GELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTRNLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKK
GE + A V+L I L+++ + NL S+ L E +S+ F + IS+NG L V+K + + + + F+ K
Subjt: GELVSAAAIDTVKLHFGTSYILLDNLYIVQGFTRNLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEHNLYVLKPNSVKSVLNTKLFKTAETGTKK
Query: AKVSPKENAYLWHLRLGHIN------LKRIEKLVKSGLLNELEENFLSVCESCLLCMMTKRPFSGKGYRA--KEPLKLVHSDLCCPMNVKARGGYEYFVS
K N LWH R GHI+ +KR LLN LE + +CE CL + PF + K PL +VHSD+C P+ YFV
Subjt: AKVSPKENAYLWHLRLGHIN------LKRIEKLVKSGLLNELEENFLSVCESCLLCMMTKRPFSGKGYRA--KEPLKLVHSDLCCPMNVKARGGYEYFVS
Query: FIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARL
F+ ++ Y YL+ KS+ F+++ + E + L D G EY+ E + + ++ I+ L+ P PQ NGVSER +++ + R+M S A+L
Subjt: FIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARL
Query: PDSFWGYAVETAVYILNNVLSKSVCE---TPFEL
SFWG AV TA Y++N + S+++ + TP+E+
Subjt: PDSFWGYAVETAVYILNNVLSKSVCE---TPFEL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.2e-39 | 28.67 | Show/hide |
Query: LAEMNGASIDESSQNF-QSLNRVKASKFEANVAYRSYHRGSTSRTKPVAPSRPKGKKRMTRGKTD---RAVAHKGKKARTLQRKESVSTSMGADTGRGIV
+ E G S SS N+ +S R K+ + Y+ K P+ KGK + K D A+ +E + +V
Subjt: LAEMNGASIDESSQNF-QSLNRVKASKFEANVAYRSYHRGSTSRTKPVAPSRPKGKKRMTRGKTD---RAVAHKGKKARTLQRKESVSTSMGADTGRGIV
Query: PNSLPRGRIKGIDSWQPLQEGEV-TLRVGSGELVSAAAID--TVKLHFGTSYILLDNLYIVQGFTRNLGSISCLLEQCISVSFYGNKAFISRNGNLICSA
+ D + G+ T+++G+ A I +K + G + +L D + V NL S L++ S++ N+ + G+L+ +
Subjt: PNSLPRGRIKGIDSWQPLQEGEV-TLRVGSGELVSAAAID--TVKLHFGTSYILLDNLYIVQGFTRNLGSISCLLEQCISVSFYGNKAFISRNGNLICSA
Query: SLEHNLYVLKPNSVKSVLNTKLFKT-AETGTKKAKVSPKE-NAYLWHLRLGHINLKRIEKLVKSGLLNELEENFLSVCESCLLCMMTKRPFSGKGYRAKE
K V L++T AE + + E + LWH R+GH++ K ++ L K L++ + + C+ CL + F R
Subjt: SLEHNLYVLKPNSVKSVLNTKLFKT-AETGTKKAKVSPKE-NAYLWHLRLGHINLKRIEKLVKSGLLNELEENFLSVCESCLLCMMTKRPFSGKGYRAKE
Query: PLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHKITSQLSAPGMP
L LV+SD+C PM +++ GG +YFV+FI D SR ++Y++ K + + F+++ VE G+ LK LRSD GGEY EF++Y H I + + PG P
Subjt: PLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHKITSQLSAPGMP
Query: QQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILN
Q NGV+ER N+++++ VRSM A+LP SFWG AV+TA Y++N
Subjt: QQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILN
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| P25384 Transposon Ty2-C Gag-Pol polyprotein | 2.8e-19 | 27.21 | Show/hide |
Query: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEH-NLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLL
+L S+S L Q I+ F N + R+ + + ++H + Y L S K ++ + + K K+K K L H LGH N + I+K +K +
Subjt: NLGSISCLLEQCISVSFYGNKAFISRNGNLICSASLEH-NLYVLKPNSVKSVLNTKLFKTAETGTKKAKVSPKENAYLWHLRLGHINLKRIEKLVKSGLL
Query: NELEENFLS-------VCESCLLCMMTKRPFSGKGYRAK-----EPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIY-LMDRKSET-LEKFKEY
L+E+ + C CL+ TK KG R K EP + +H+D+ P++ + YF+SF + +R+ ++Y L DR+ E+ L F
Subjt: NELEENFLS-------VCESCLLCMMTKRPFSGKGYRAK-----EPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIY-LMDRKSET-LEKFKEY
Query: KTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLS
++N + ++ DRG EY + + IT+ + + +GV+ER N++LL+ R++ + LP+ W AVE + I N+++S
Subjt: KTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNNVLS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-26 | 31.11 | Show/hide |
Query: AKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLNEL--EENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYS
A S K WH RLGH + ++ + L+ L FLS C CL+ K PFS + PL+ ++SD+ + + Y Y+V F+ ++
Subjt: AKVSPKENAYLWHLRLGHINLKRIEKLVKSGLLNEL--EENFLSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYS
Query: RYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWG
RY ++Y + +KS+ E F +K +EN + T SD GGE++ +Y +H I+ S P P+ NG+SERK++ +++ ++ S+A +P ++W
Subjt: RYGYIYLMDRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWG
Query: YAVETAVYILNNVLSKSV-CETPFE
YA AVY++N + + + E+PF+
Subjt: YAVETAVYILNNVLSKSV-CETPFE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-27 | 31.46 | Show/hide |
Query: WHLRLGHINLKRIEKLVKSGLLNELEENF-LSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKS
WH RLGH +L + ++ + L L + L C C + K PFS + +PL+ ++SD+ + + Y Y+V F+ ++RY ++Y + +KS
Subjt: WHLRLGHINLKRIEKLVKSGLLNELEENF-LSVCESCLLCMMTKRPFSGKGYRAKEPLKLVHSDLCCPMNVKARGGYEYFVSFIGDYSRYGYIYLMDRKS
Query: ETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNN
+ + F +K+ VEN + TL SD GGE++ +DY+ +H I+ S P P+ NG+SERK++ +++M ++ S+A +P ++W YA AVY++N
Subjt: ETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHKITSQLSAPGMPQQNGVSERKNKSLLDMVRSMRSYARLPDSFWGYAVETAVYILNN
Query: VLSKSV-CETPFE
+ + + ++PF+
Subjt: VLSKSV-CETPFE
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