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Tan0021697 (gene) of Snake gourd v1 genome

Gene IDTan0021697
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNase H domain-containing protein
Genome locationLG10:67785212..67785643
RNA-Seq ExpressionTan0021697
SyntenyTan0021697
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015382216.1 uncharacterized protein LOC107175320 [Citrus sinensis]1.0e-0830.66Show/hide
Query:  MVENLTEK----ELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGC
        ++++LT K    ELEL +++ W +W  RN+ +F   +    P + V R I     + + K  N        + S + W+ PP+G +K+NVDA   V    
Subjt:  MVENLTEK----ELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGC

Query:  SGLRWILYDSVGSPIYAGCKTLPYLRSIAWLEAQALL
        +GL  ++ +SVG  + A  +  PY   +A +EA+A+L
Subjt:  SGLRWILYDSVGSPIYAGCKTLPYLRSIAWLEAQALL
XP_015382877.1 uncharacterized protein LOC107175700 [Citrus sinensis]1.4e-0830.71Show/hide
Query:  EKELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWILYDS
        + ELEL +++ W +W  RN+ +F        P + V R I     + + K  N        + S + W+ PP+G +K+NVDA+  V    +GL  ++ +S
Subjt:  EKELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWILYDS

Query:  VGSPIYAGCKTLPYLRSIAWLEAQALL
        VG  + A  +  PY   +A +EA+A+L
Subjt:  VGSPIYAGCKTLPYLRSIAWLEAQALL
XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]6.7e-0828.35Show/hide
Query:  TEKELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWILYD
        ++ ++EL +++LW +W  RN W+F   N    P   V +       F +++    + + I+  S   +W PP RG +K+NVDA+  + K  +GL  ++ D
Subjt:  TEKELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWILYD

Query:  SVGSPIYAGCKTLPYLRSIAWLEAQAL
          G+ I A  K   +   +   EA+A+
Subjt:  SVGSPIYAGCKTLPYLRSIAWLEAQAL
XP_024043255.1 uncharacterized protein LOC112099951 [Citrus clementina]8.8e-0828.57Show/hide
Query:  MVENLTEKELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLR
        M    T+K++EL I++ W +W  RN ++F+  +   +PV  V R       F + K +    +    Q S  +W+ PP G +K+NVDA+  V +  +GL 
Subjt:  MVENLTEKELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLR

Query:  WILYDSVGSPIYAGCKTLPYLRSIAWLEAQALL
         ++ +S G  +    + + +  ++A +EA+A+L
Subjt:  WILYDSVGSPIYAGCKTLPYLRSIAWLEAQALL
XP_024046693.1 uncharacterized protein LOC112101029 [Citrus clementina]6.1e-0930.66Show/hide
Query:  MVENLTEK----ELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGC
        ++++LT K    ELEL +++ W +W  RN+ +F     +  P + V R I     + + K  N        + S + W+ PP+G +K+NVDA+  V    
Subjt:  MVENLTEK----ELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGC

Query:  SGLRWILYDSVGSPIYAGCKTLPYLRSIAWLEAQALL
        +GL  ++ +SVG  + A  +  PY   +A +EA+A+L
Subjt:  SGLRWILYDSVGSPIYAGCKTLPYLRSIAWLEAQALL
TrEMBL top hitse value%identityAlignment
A0A1S8ADA4 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (Fragment)2.9e-0930.66Show/hide
Query:  MVENLTEK----ELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGC
        ++++LT K    ELEL +++ W +W  RN+ +F   +    P + V R I     + + K  N        + S + W+ PP+G +K+NVDA+  V    
Subjt:  MVENLTEK----ELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGC

Query:  SGLRWILYDSVGSPIYAGCKTLPYLRSIAWLEAQALL
        +GL  ++ +SVG  + A  +  PY   +A +EA+A+L
Subjt:  SGLRWILYDSVGSPIYAGCKTLPYLRSIAWLEAQALL
A0A5D3E1D7 Transforming growth factor-beta receptor-associated protein 1 isoform X12.8e-0744.44Show/hide
Query:  WIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWILYDSVGSPIYAGCK
        W+  + +FG        +VR E  SSH  WS P  G WKLN DA  V    C G+ W++ DSVGSPI  GC+
Subjt:  WIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWILYDSVGSPIYAGCK
A0A7G2FDB7 (thale cress) hypothetical protein1.4e-0633.08Show/hide
Query:  ENLTEKELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWI
        E    K  E+   L+W LW  RN   FN  N H      + R I+ Q ++    K  +S    ++  + V+W PP  G +K NVDA+        G+ WI
Subjt:  ENLTEKELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWI

Query:  LYDSVGSPIYAGCKTLPYLRSIAWLEAQAL
        L D+ G+  + G K  P L S    EA AL
Subjt:  LYDSVGSPIYAGCKTLPYLRSIAWLEAQAL
A0A803LKW3 Uncharacterized protein3.0e-0636.22Show/hide
Query:  LLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFG-KSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWILYDSVGSPIYAG
        +LW LW  RN W+F+ TN  +S     C W   +  F  K  K +L  + I        WSPPP   +K+N DAS V     SG   +  DS GS I  G
Subjt:  LLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFG-KSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWILYDSVGSPIYAG

Query:  CKTLPYLRSIAWLEAQALLGECSLSSI
             YL S    E +A+  E  LS I
Subjt:  CKTLPYLRSIAWLEAQALLGECSLSSI
A0A803Q6L7 Uncharacterized protein4.0e-0630Show/hide
Query:  LTEKELELAISLLWCLWTLRNK-WMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWIL
        L++ E E AI + W +W  RNK W     N  +   + +  W++       +   +L   + E + +   W  PP G + +N DA+    K   GL +I 
Subjt:  LTEKELELAISLLWCLWTLRNK-WMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWIL

Query:  YDSVGSPIYAGCKTLPYLRSIAWLEAQALL
         D  G+PI AG   LP + S+   EA+A+L
Subjt:  YDSVGSPIYAGCKTLPYLRSIAWLEAQALL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G09775.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1)1.2e-0731.15Show/hide
Query:  LWCLWTLRNKWMFNPTNHHMSPVS-----EVCRWIIGQI-DFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWILYDSVGSP
        +W LW  RN+++F   +     V+     E   W+   I D   S        R   +S    WSPPP G  K N D+  V  +  +   WI+ DS G  
Subjt:  LWCLWTLRNKWMFNPTNHHMSPVS-----EVCRWIIGQI-DFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWILYDSVGSP

Query:  IYAGCKTLPYLRSIAWLEAQAL
        I++GC  L   +S + L+A+AL
Subjt:  IYAGCKTLPYLRSIAWLEAQAL
AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-0530.77Show/hide
Query:  LLWCLWTLRNKWMFNPTNHHMSPVSEVC-----RWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWILYDSVGSP
        L+W +W   N  +FN T        E+       W+   +   + +  N    R    S +  WSPP R   K N DAS       SGL WIL +S G+ 
Subjt:  LLWCLWTLRNKWMFNPTNHHMSPVSEVC-----RWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWILYDSVGSP

Query:  IYAG
        I  G
Subjt:  IYAG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAAAATTTAACTGAAAAGGAGCTGGAGCTAGCAATATCTCTTCTGTGGTGCCTCTGGACCTTGAGAAATAAATGGATGTTTAATCCTACAAACCATCACATGTC
CCCTGTCTCTGAGGTGTGTAGATGGATAATTGGCCAGATTGACTTTGGAAAAAGCAAGAAGGCAAATCTTAGTGTTGTTAGAATAGAGAAGCAATCGAGTCATGTAAGTT
GGTCCCCTCCCCCTCGTGGTGCCTGGAAGTTAAACGTCGATGCCTCCCCGGTGGTGTTGAAGGGTTGTTCGGGGTTGAGATGGATCCTCTATGACTCTGTCGGTTCTCCT
ATCTACGCTGGTTGCAAGACCCTGCCTTATCTGCGCTCAATTGCCTGGCTGGAAGCTCAAGCTTTGCTTGGGGAGTGTTCTCTGTCAAGCATTGTCCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAAAATTTAACTGAAAAGGAGCTGGAGCTAGCAATATCTCTTCTGTGGTGCCTCTGGACCTTGAGAAATAAATGGATGTTTAATCCTACAAACCATCACATGTC
CCCTGTCTCTGAGGTGTGTAGATGGATAATTGGCCAGATTGACTTTGGAAAAAGCAAGAAGGCAAATCTTAGTGTTGTTAGAATAGAGAAGCAATCGAGTCATGTAAGTT
GGTCCCCTCCCCCTCGTGGTGCCTGGAAGTTAAACGTCGATGCCTCCCCGGTGGTGTTGAAGGGTTGTTCGGGGTTGAGATGGATCCTCTATGACTCTGTCGGTTCTCCT
ATCTACGCTGGTTGCAAGACCCTGCCTTATCTGCGCTCAATTGCCTGGCTGGAAGCTCAAGCTTTGCTTGGGGAGTGTTCTCTGTCAAGCATTGTCCTCTGA
Protein sequenceShow/hide protein sequence
MVENLTEKELELAISLLWCLWTLRNKWMFNPTNHHMSPVSEVCRWIIGQIDFGKSKKANLSVVRIEKQSSHVSWSPPPRGAWKLNVDASPVVLKGCSGLRWILYDSVGSP
IYAGCKTLPYLRSIAWLEAQALLGECSLSSIVL