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Tan0021698 (gene) of Snake gourd v1 genome

Gene IDTan0021698
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionF-box protein interaction domain protein
Genome locationLG06:10832668..10833017
RNA-Seq ExpressionTan0021698
SyntenyTan0021698
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR45251.1 hypothetical protein CICLE_v10003098mg [Citrus clementina]1.2e-0450.79Show/hide
Query:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESNGCWEGGQSGHMKKNCPNR
        +NFGLWQVQVKDV+IQSGLHK LKG+PS   P   +  G  T+    WE  +  +  K+  NR
Subjt:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESNGCWEGGQSGHMKKNCPNR

KAF5463231.1 hypothetical protein F2P56_019161 [Juglans regia]1.6e-0485.71Show/hide
Query:  MNFGLWQVQVKDVMIQSGLHKDLKGRPS
        +NFGLWQVQVKDV+IQSGLHK LKGRP+
Subjt:  MNFGLWQVQVKDVMIQSGLHKDLKGRPS

KAF6150548.1 hypothetical protein GIB67_030349 [Kingdonia uniflora]3.5e-0740.21Show/hide
Query:  MNFGLWQVQVKDVMIQSGLHKDLKGRP----SYGVPERLNADGGPTESN-----GCWEGGQSGHMKKNC----PNRASSSKGSGSDANMVSFVRGDG
        +NFGLWQ+ V+D++IQ GL K LKG+P    S      +    G    N      CW  GQSGH + +C     NRASS++GS +D N ++ V  +G
Subjt:  MNFGLWQVQVKDVMIQSGLHKDLKGRP----SYGVPERLNADGGPTESN-----GCWEGGQSGHMKKNC----PNRASSSKGSGSDANMVSFVRGDG

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]1.7e-0964.41Show/hide
Query:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESNGCWEGGQSGHMKKN
        +NFGLWQVQVKDV+IQS LHK LKGRPS G  E+L+ DGGP ES+    GG S   KK+
Subjt:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESNGCWEGGQSGHMKKN

XP_022154929.1 uncharacterized protein LOC111022075 [Momordica charantia]5.7e-1075.56Show/hide
Query:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESN
        +NFGLWQVQVKDVMIQSGLHK LKGRPS    E+L+ DGGP ES+
Subjt:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESN

TrEMBL top hitse value%identityAlignment
A0A2H5QXN2 Uncharacterized protein6.0e-0550.79Show/hide
Query:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESNGCWEGGQSGHMKKNCPNR
        +NFGLWQVQVKDV+IQSGLHK LKG+PS   P   +  G  T+    WE  +  +  K+  NR
Subjt:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESNGCWEGGQSGHMKKNCPNR

A0A6J1CG82 uncharacterized protein LOC1110105218.0e-1064.41Show/hide
Query:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESNGCWEGGQSGHMKKN
        +NFGLWQVQVKDV+IQS LHK LKGRPS G  E+L+ DGGP ES+    GG S   KK+
Subjt:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESNGCWEGGQSGHMKKN

A0A6J1DNQ5 uncharacterized protein LOC1110220752.8e-1075.56Show/hide
Query:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESN
        +NFGLWQVQVKDVMIQSGLHK LKGRPS    E+L+ DGGP ES+
Subjt:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESN

A0A7J7M716 Uncharacterized protein1.7e-0740.21Show/hide
Query:  MNFGLWQVQVKDVMIQSGLHKDLKGRP----SYGVPERLNADGGPTESN-----GCWEGGQSGHMKKNC----PNRASSSKGSGSDANMVSFVRGDG
        +NFGLWQ+ V+D++IQ GL K LKG+P    S      +    G    N      CW  GQSGH + +C     NRASS++GS +D N ++ V  +G
Subjt:  MNFGLWQVQVKDVMIQSGLHKDLKGRP----SYGVPERLNADGGPTESN-----GCWEGGQSGHMKKNC----PNRASSSKGSGSDANMVSFVRGDG

V4T6T3 Uncharacterized protein6.0e-0550.79Show/hide
Query:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESNGCWEGGQSGHMKKNCPNR
        +NFGLWQVQVKDV+IQSGLHK LKG+PS   P   +  G  T+    WE  +  +  K+  NR
Subjt:  MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESNGCWEGGQSGHMKKNCPNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTTGGCTTGTGGCAAGTACAAGTCAAAGATGTGATGATACAATCTGGGTTACACAAGGATTTGAAGGGAAGACCAAGCTATGGTGTTCCTGAAAGGTTAAACGC
TGATGGTGGTCCAACGGAGTCCAATGGTTGTTGGGAAGGCGGGCAGTCTGGACACATGAAAAAGAATTGTCCTAACAGAGCAAGTTCGTCAAAAGGCTCTGGGTCGGATG
CTAACATGGTCTCTTTCGTCAGAGGAGATGGGGACTTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACTTTGGCTTGTGGCAAGTACAAGTCAAAGATGTGATGATACAATCTGGGTTACACAAGGATTTGAAGGGAAGACCAAGCTATGGTGTTCCTGAAAGGTTAAACGC
TGATGGTGGTCCAACGGAGTCCAATGGTTGTTGGGAAGGCGGGCAGTCTGGACACATGAAAAAGAATTGTCCTAACAGAGCAAGTTCGTCAAAAGGCTCTGGGTCGGATG
CTAACATGGTCTCTTTCGTCAGAGGAGATGGGGACTTCTTCTGA
Protein sequenceShow/hide protein sequence
MNFGLWQVQVKDVMIQSGLHKDLKGRPSYGVPERLNADGGPTESNGCWEGGQSGHMKKNCPNRASSSKGSGSDANMVSFVRGDGDFF