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Tan0021726 (gene) of Snake gourd v1 genome

Gene IDTan0021726
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationLG08:3905209..3918574
RNA-Seq ExpressionTan0021726
SyntenyTan0021726
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]4.8e-6786.62Show/hide
Query:  MERGSLMM-LVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV
        ME+GS+MM LVL L ++SLANAQSA+NVRATYH YNPQDINWDY +ASV+CATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCL+VTNTETGASEIV
Subjt:  MERGSLMM-LVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNG FRGHL VNY FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC

XP_022143159.1 pathogenesis-related protein PR-4-like [Momordica charantia]2.0e-6583.69Show/hide
Query:  MERGSLMMLVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVR
        MERG L+MLVLGLCL+ +ANAQSA+NVRATYH YNPQ+INWDY +ASV+CATWDANKPLEWRRRYGWTAFCGPVGPRGQ SCGRCL+VTNTET AS IVR
Subjt:  MERGSLMMLVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVR

Query:  IVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC
        IVDQC+NGGLDLDVNVF  IDTNGNG  RGH+ VNY FVNC
Subjt:  IVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC

XP_022946136.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]4.5e-6584.51Show/hide
Query:  MERGS-LMMLVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV
        ME+ S LM+L L L ++SLANAQSA+NVRATYH YNPQDINWDY +ASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQ SCGRCL+VTNTETGASEIV
Subjt:  MERGS-LMMLVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG FRGHLIVNY FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]3.1e-6685.21Show/hide
Query:  MERGS-LMMLVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV
        ME+GS LM+L L L ++SLANAQSA+NVRATYH YNPQDINWDY +ASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQ SCGRCL+VTNTETGASEIV
Subjt:  MERGS-LMMLVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG FRGHLIVNY FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC

XP_038890575.1 pathogenesis-related protein PR-4-like [Benincasa hispida]9.1e-6684.51Show/hide
Query:  MERGSLMM-LVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV
        ME+GS+MM LVL L ++S+ANAQSA+NVRATYH YNPQ+INWDY +ASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQ SCGRCL+VTNTETGAS IV
Subjt:  MERGSLMM-LVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC
        RIVDQCSNGGLDLDVNVF+++DTNGNG FRGHL VNY FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LIC8 Barwin domain-containing protein2.2e-6584.51Show/hide
Query:  MERGSLMM-LVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV
        M +GS+MM LVL L ++SLANAQSA+NVRATYH YNPQDINWDY +ASV+CATWDA+KPLEWRR+YGWTAFCGPVGPRG+ SCGRCL+VTNTETGASEIV
Subjt:  MERGSLMM-LVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNG  RGHLIVNY FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like2.3e-6786.62Show/hide
Query:  MERGSLMM-LVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV
        ME+GS+MM LVL L ++SLANAQSA+NVRATYH YNPQDINWDY +ASV+CATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCL+VTNTETGASEIV
Subjt:  MERGSLMM-LVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNG FRGHL VNY FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like2.3e-6786.62Show/hide
Query:  MERGSLMM-LVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV
        ME+GS+MM LVL L ++SLANAQSA+NVRATYH YNPQDINWDY +ASV+CATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCL+VTNTETGASEIV
Subjt:  MERGSLMM-LVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNG FRGHL VNY FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC

A0A6J1CNH9 pathogenesis-related protein PR-4-like9.8e-6683.69Show/hide
Query:  MERGSLMMLVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVR
        MERG L+MLVLGLCL+ +ANAQSA+NVRATYH YNPQ+INWDY +ASV+CATWDANKPLEWRRRYGWTAFCGPVGPRGQ SCGRCL+VTNTET AS IVR
Subjt:  MERGSLMMLVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVR

Query:  IVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC
        IVDQC+NGGLDLDVNVF  IDTNGNG  RGH+ VNY FVNC
Subjt:  IVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like1.5e-6685.21Show/hide
Query:  MERGS-LMMLVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV
        ME+GS LM+L L L ++SLANAQSA+NVRATYH YNPQDINWDY +ASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQ SCGRCL+VTNTETGASEIV
Subjt:  MERGS-LMMLVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG FRGHLIVNY FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN11.3e-5476.47Show/hide
Query:  SASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRIDT
        SA NVRATYH YNPQ++ WD N  S YC+TWDANKPL WR++YGWTAFCGPVGPRG+ SCG+CL+VTNT TGA   VRIVDQCSNGGLDLDVNVFR+IDT
Subjt:  SASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRIDT

Query:  NGNGEFRGHLIVNYAFVNC
        +GNG  +GHLIVNY FV+C
Subjt:  NGNGEFRGHLIVNYAFVNC

P09762 Wound-induced protein WIN22.7e-5273.95Show/hide
Query:  SASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRIDT
        SA NVRATYH YNPQ++ WD N  S YC+TWDANKP  WR +YGWTAFCGPVGPRG+ SCG+CL+VTNT TGA   VRIVDQCSNGGLDLD+NVF++IDT
Subjt:  SASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRIDT

Query:  NGNGEFRGHLIVNYAFVNC
        +G G  +GHLIVNY FVNC
Subjt:  NGNGEFRGHLIVNYAFVNC

P29062 Pathogenesis-related protein PR-4A6.3e-5470.15Show/hide
Query:  MLVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVRIVDQCSN
        +L++ + +M++A AQSA+NVR+TYH YNPQ+INWD   AS +CATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCL+VTNT TG    VRIVDQCSN
Subjt:  MLVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVRIVDQCSN

Query:  GGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC
        GGLDLDVNVF ++DTNG G  +GHL VNY FVNC
Subjt:  GGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC

P29063 Pathogenesis-related protein PR-4B1.3e-5468.97Show/hide
Query:  MERGSLMMLVLGLCLMS----LANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGAS
        MER +   L + L +MS    +A AQSA+NVR+TYH YNPQ+INWD   AS +CATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCL+VTNT TG  
Subjt:  MERGSLMMLVLGLCLMS----LANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGAS

Query:  EIVRIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC
          VRIVDQCSNGGLDLDVNVF ++DTNG G  +GHLIVNY FVNC
Subjt:  EIVRIVDQCSNGGLDLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC

P32045 Pathogenesis-related protein P24.0e-5677.95Show/hide
Query:  LMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVRIVDQCSNGGLDLDV
        +M++A AQSA+NVRATYH YNPQ+INWD   ASVYCATWDA+KPLEWRRRYGWTAFCGP GP GQ SCGRCL+VTNT TG  E VRIVDQC NGGLDLDV
Subjt:  LMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVRIVDQCSNGGLDLDV

Query:  NVFRRIDTNGNGEFRGHLIVNYAFVNC
        NVF R+DTNG G  RG+L VNY FVNC
Subjt:  NVFRRIDTNGNGEFRGHLIVNYAFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 41.8e-4868.33Show/hide
Query:  QSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRID
        +SASNVRATYH+YNP   NWD    S YC+TWDA+KP  WR +YGWTAFCGP GPRGQ SCG+CL+V NT T A+  VRIVDQCSNGGLDLDV +F +ID
Subjt:  QSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRID

Query:  TNGNGEFRGHLIVNYAFVNC
        T+G G  +GHLIV+Y FV+C
Subjt:  TNGNGEFRGHLIVNYAFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGGAAGTTTGATGATGTTGGTTTTGGGTTTGTGCCTTATGAGCTTGGCAAATGCTCAAAGTGCTTCAAATGTGAGGGCTACCTATCACTATTACAATCCACA
AGACATCAATTGGGATTACAATAAAGCAAGTGTTTATTGTGCAACATGGGATGCCAACAAGCCCCTTGAGTGGCGTCGCCGCTACGGTTGGACCGCTTTTTGCGGCCCTG
TTGGTCCTCGTGGCCAACCTTCTTGCGGTCGTTGTTTGAAGGTGACTAACACCGAAACAGGAGCTTCAGAAATTGTGAGAATTGTGGATCAATGCTCTAATGGAGGCTTG
GATTTGGACGTGAACGTGTTCAGAAGAATTGACACCAATGGAAATGGAGAGTTTCGAGGCCATCTTATTGTCAACTATGCATTTGTCAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAGGAAGTTTGATGATGTTGGTTTTGGGTTTGTGCCTTATGAGCTTGGCAAATGCTCAAAGTGCTTCAAATGTGAGGGCTACCTATCACTATTACAATCCACA
AGACATCAATTGGGATTACAATAAAGCAAGTGTTTATTGTGCAACATGGGATGCCAACAAGCCCCTTGAGTGGCGTCGCCGCTACGGTTGGACCGCTTTTTGCGGCCCTG
TTGGTCCTCGTGGCCAACCTTCTTGCGGTCGTTGTTTGAAGGTGACTAACACCGAAACAGGAGCTTCAGAAATTGTGAGAATTGTGGATCAATGCTCTAATGGAGGCTTG
GATTTGGACGTGAACGTGTTCAGAAGAATTGACACCAATGGAAATGGAGAGTTTCGAGGCCATCTTATTGTCAACTATGCATTTGTCAATTGCTAA
Protein sequenceShow/hide protein sequence
MERGSLMMLVLGLCLMSLANAQSASNVRATYHYYNPQDINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQPSCGRCLKVTNTETGASEIVRIVDQCSNGGL
DLDVNVFRRIDTNGNGEFRGHLIVNYAFVNC