; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021777 (gene) of Snake gourd v1 genome

Gene IDTan0021777
OrganismTrichosanthes anguina (Snake gourd v1)
Description54S ribosomal protein L37, mitochondrial-like
Genome locationLG07:65813958..65817582
RNA-Seq ExpressionTan0021777
SyntenyTan0021777
Gene Ontology termsGO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154133.1 54S ribosomal protein L37, mitochondrial-like [Momordica charantia]2.2e-5385.71Show/hide
Query:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRR
        MAMSQ RLF RS++N KD +K+T+VRTFAAGGK KKGSKGG AAD PKASILSKEVKS+TVVGANILKEGADPK+MADSEYPDW+WRLIDKHPALSELRR
Subjt:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRR

Query:  KNVETLPYDDLKRFVKLDNRARIKENNSMKAKN
        KNVE LPY+DLKRFVKLDNRA IKENNS+KAKN
Subjt:  KNVETLPYDDLKRFVKLDNRARIKENNSMKAKN

XP_022928329.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita moschata]2.6e-5488.06Show/hide
Query:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAA-DAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELR
        MAMSQIRL RRSL+NTKDL+KLT VRTFAAGGK KKGSKGGGAA DAPKASILSKEVKSTTVVGANILKEGADPK+MADSEYPDW+WRLIDK PALSEL+
Subjt:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAA-DAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELR

Query:  RKNVETLPYDDLKRFVKLDNRARIKENNSMKAKN
        RK+ +TLPY+DLKRFVKLD RARIKENNS KAKN
Subjt:  RKNVETLPYDDLKRFVKLDNRARIKENNSMKAKN

XP_022989738.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima]8.0e-5688.72Show/hide
Query:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRR
        MAMSQIRLFRRSL+NTKDL+KLT VRTFAAGGK KKGSKGG A DAPKASILSKEVKSTTVVGANILKEGADPK+MADSEYPDW+WRLIDK PALSELRR
Subjt:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRR

Query:  KNVETLPYDDLKRFVKLDNRARIKENNSMKAKN
        K+ +TLPY+DLKRFVKLD RARIKENNS KAKN
Subjt:  KNVETLPYDDLKRFVKLDNRARIKENNSMKAKN

XP_038883606.1 39S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida]1.8e-5587.22Show/hide
Query:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRR
        M MSQIRLFRRS+VN+KDL++LT+VRTFAAGGKSKKGSKGG AADAPKAS LSKEVKSTTVVGANILKEGADPKIMADSEYP W+W L+DKHP LSELRR
Subjt:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRR

Query:  KNVETLPYDDLKRFVKLDNRARIKENNSMKAKN
        KNVETLPY DLKRFVKLD RA+IKENNS KAKN
Subjt:  KNVETLPYDDLKRFVKLDNRARIKENNSMKAKN

XP_038883607.1 54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida]1.8e-5587.22Show/hide
Query:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRR
        M MSQIRLFRRS+VN+KDL++LT+VRTFAAGGKSKKGSKGG AADAPKAS LSKEVKSTTVVGANILKEGADPKIMADSEYP W+W L+DKHP LSELRR
Subjt:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRR

Query:  KNVETLPYDDLKRFVKLDNRARIKENNSMKAKN
        KNVETLPY DLKRFVKLD RA+IKENNS KAKN
Subjt:  KNVETLPYDDLKRFVKLDNRARIKENNSMKAKN

TrEMBL top hitse value%identityAlignment
A0A1S3B544 54S ribosomal protein L37, mitochondrial isoform X29.9e-5281.95Show/hide
Query:  MAMSQIRLFRRS-LVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELR
        M +SQIR FRR+ +V++KDL++LT+VR+FAAGGKSKKGSKGG AADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYP W+W L+DKHP LSELR
Subjt:  MAMSQIRLFRRS-LVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELR

Query:  RKNVETLPYDDLKRFVKLDNRARIKENNSMKAK
        RKN E+LPY DL+RFVKLD RARIKENNS+KAK
Subjt:  RKNVETLPYDDLKRFVKLDNRARIKENNSMKAK

A0A5D3CXE8 39S ribosomal protein L549.9e-5281.95Show/hide
Query:  MAMSQIRLFRRS-LVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELR
        M +SQIR FRR+ +V++KDL++LT+VR+FAAGGKSKKGSKGG AADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYP W+W L+DKHP LSELR
Subjt:  MAMSQIRLFRRS-LVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELR

Query:  RKNVETLPYDDLKRFVKLDNRARIKENNSMKAK
        RKN E+LPY DL+RFVKLD RARIKENNS+KAK
Subjt:  RKNVETLPYDDLKRFVKLDNRARIKENNSMKAK

A0A6J1DJG1 54S ribosomal protein L37, mitochondrial-like1.1e-5385.71Show/hide
Query:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRR
        MAMSQ RLF RS++N KD +K+T+VRTFAAGGK KKGSKGG AAD PKASILSKEVKS+TVVGANILKEGADPK+MADSEYPDW+WRLIDKHPALSELRR
Subjt:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRR

Query:  KNVETLPYDDLKRFVKLDNRARIKENNSMKAKN
        KNVE LPY+DLKRFVKLDNRA IKENNS+KAKN
Subjt:  KNVETLPYDDLKRFVKLDNRARIKENNSMKAKN

A0A6J1EKI4 54S ribosomal protein L37, mitochondrial-like1.3e-5488.06Show/hide
Query:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAA-DAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELR
        MAMSQIRL RRSL+NTKDL+KLT VRTFAAGGK KKGSKGGGAA DAPKASILSKEVKSTTVVGANILKEGADPK+MADSEYPDW+WRLIDK PALSEL+
Subjt:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAA-DAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELR

Query:  RKNVETLPYDDLKRFVKLDNRARIKENNSMKAKN
        RK+ +TLPY+DLKRFVKLD RARIKENNS KAKN
Subjt:  RKNVETLPYDDLKRFVKLDNRARIKENNSMKAKN

A0A6J1JQ61 54S ribosomal protein L37, mitochondrial-like3.9e-5688.72Show/hide
Query:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRR
        MAMSQIRLFRRSL+NTKDL+KLT VRTFAAGGK KKGSKGG A DAPKASILSKEVKSTTVVGANILKEGADPK+MADSEYPDW+WRLIDK PALSELRR
Subjt:  MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRR

Query:  KNVETLPYDDLKRFVKLDNRARIKENNSMKAKN
        K+ +TLPY+DLKRFVKLD RARIKENNS KAKN
Subjt:  KNVETLPYDDLKRFVKLDNRARIKENNSMKAKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01740.1 Mitochondrial ribosomal protein L372.6e-4470.45Show/hide
Query:  MSQIRLFRRSLVNTKDLVKLTTVRTF-AAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRRK
        M++I L R S  ++KD+V+    RTF AA  K+KKG KGGGA+DAPK S L+KE+KSTTVVGAN LK+G+DPKI+ DS+YPDW+W L+DK PALSELRRK
Subjt:  MSQIRLFRRSLVNTKDLVKLTTVRTF-AAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRRK

Query:  NVETLPYDDLKRFVKLDNRARIKENNSMKAKN
        NVETLPYDDLKRFVKLD R +IKENNS+KAKN
Subjt:  NVETLPYDDLKRFVKLDNRARIKENNSMKAKN

AT5G14290.1 Mitochondrial ribosomal protein L378.6e-4063.64Show/hide
Query:  MSQIRLFRRSLVNTKDLVKLTTVRTFA-AGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRRK
        M+ IR+F  S+  +KD+++    RTFA A GK+KK  +G G  DAPKAS LSKE+KS+ VV AN LK+G DPKI+ +S++PD++W L+DK PALSELRRK
Subjt:  MSQIRLFRRSLVNTKDLVKLTTVRTFA-AGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRRK

Query:  NVETLPYDDLKRFVKLDNRARIKENNSMKAKN
        NVETL +DDLKRFVKLD RARIKEN+S+KAKN
Subjt:  NVETLPYDDLKRFVKLDNRARIKENNSMKAKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGAGCCAAATTAGATTGTTTAGAAGAAGCCTTGTCAATACCAAAGATCTAGTAAAACTGACAACTGTGCGAACATTCGCTGCTGGAGGCAAATCGAAGAAGGG
CTCTAAAGGGGGTGGGGCTGCTGATGCTCCTAAAGCATCAATTCTTAGTAAAGAGGTCAAGTCTACTACTGTAGTTGGTGCCAATATTCTCAAGGAAGGGGCAGATCCAA
AAATCATGGCAGACTCGGAGTACCCTGATTGGATGTGGCGTTTGATCGATAAACATCCAGCTCTGAGTGAATTACGAAGGAAGAATGTCGAAACCCTTCCCTATGATGAT
CTCAAACGCTTTGTTAAATTGGATAATCGAGCAAGGATTAAGGAAAACAACTCTATGAAGGCCAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
GGAGTTGTAAGTTTGTAACTAAGCCCAAGCCCTAATCGATCTGCTGTCTCTCAGGCGCATCCCTTTTTCTCTTCTGCCATTGCCGAACTCTTGAAGCTCCGATTCTCAGT
CTCAATCTCCACCATCTCTGTTGCTTTCTTCTCTGTCAGAAGAAAAAATGGCTATGAGCCAAATTAGATTGTTTAGAAGAAGCCTTGTCAATACCAAAGATCTAGTAAAA
CTGACAACTGTGCGAACATTCGCTGCTGGAGGCAAATCGAAGAAGGGCTCTAAAGGGGGTGGGGCTGCTGATGCTCCTAAAGCATCAATTCTTAGTAAAGAGGTCAAGTC
TACTACTGTAGTTGGTGCCAATATTCTCAAGGAAGGGGCAGATCCAAAAATCATGGCAGACTCGGAGTACCCTGATTGGATGTGGCGTTTGATCGATAAACATCCAGCTC
TGAGTGAATTACGAAGGAAGAATGTCGAAACCCTTCCCTATGATGATCTCAAACGCTTTGTTAAATTGGATAATCGAGCAAGGATTAAGGAAAACAACTCTATGAAGGCC
AAGAATTGATAAAATAAGAGAGTTTGAATCAAGTCAATCTCCTGCAAGCATGTGGAAGGAATAACAAGCAAAAGCTTACAACAGGAGCAAGGTATTTTAGACCTGTAAGC
TATCATCTTGTTGTCAAAAGTACACAACTTCTGGTTTACTACACATTCTTTAGTTGAATGAAAACAAGAAAGGGGCTGAGGTTCTTTTCACAATCAAAACCTTTGAATTG
TCAAAATTTTGAATTAGGGAAACACTTTTATGTCCCACTAGATGCTTTTGTATTTCACATTTATTAAATAAATGAACATGATATCTTTTAACTTAGTTAGGTGTAGTTGA
TGCTTGAAGAGGTTGCATTTGCATCCAAATGGTTGATAATGACAAGTCAACTTTACTGTCCCAAAATTAGTGAAGGATGCTTTTGGAATCAACCGATTCCGAAATCGGTA
TTTCTTGATGAGGAACCAAGCTTTCGTTAAGAAAAAAATGAATGAATACAATCAACCAGCCTTATAAGGGAGAAATTATTCGGTGAGGCCGCCACAATGTGGCTGGTAAT
TTTTCACCGTTGGATGGAGAGAGAGAAGTGCTCCGAATTTGTATCCGAGGAATATTAGGGGCATGAAAATTATTGGATCCACATCTAATAGCTATTATGAGGTAGCTACA
TTATGGCGATCTCATTGAATAATTTCTCCTTATAAGGAGCCCGTGGAAAGGACAAAAAGAAAGAATCCAATGAATTTCGAAGAAGTTTCTTGTTTAATGAAATAGAATTA
CTCATACTTAGTGTTAAATTTTTATGTTAATATTTGTACAATATTCATCAATATTAATATTTGTACAATATTTATTCAATAGGTTGTATGTGATATGCTAAATTAGATTG
AAATCCCATTCATTTAGATTGGGAGGGATGTTTTCCTTTTTCTTTT
Protein sequenceShow/hide protein sequence
MAMSQIRLFRRSLVNTKDLVKLTTVRTFAAGGKSKKGSKGGGAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWMWRLIDKHPALSELRRKNVETLPYDD
LKRFVKLDNRARIKENNSMKAKN