| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-151 | 56.13 | Show/hide |
Query: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
+ Y+RW +ANEKA+ YI+ S+S+VLAKKHE ++TA+EIM+SLQEMFGQ S Q++HD+LKY++NARM EG+SVREHVLNMM HFN+ EMNGA IDE+SQVS
Subjt: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
Query: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
FILE+L +SFL + + N L ++ SL+ +G ++ FH + G K+ K+ K + A KK
Subjt: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
Query: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
K AA+ F + G P + +++ QGK DLLV ETCLVE+ DSAWI+DS ATNHVCSSFQ I SW+ L GE+T+RVG+ +VSA A+G
Subjt: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
Query: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
++L ++++LL+N+Y+VP RNL+S+ CLLEQ S++FN NK FI +NG ICSA LE++LYVL+ + K++LNTE+FKT T+ K+ K+SPKENAHL
Subjt: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
Query: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
WHLR G+INLNRIE+LVK+GLL+ELEENSL VCESC EGKMTKRPF+GKG+R KEPLELVH DLCGPMNVK RGG+EYF++F DYSRYGY+YLM KSE
Subjt: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
Query: TLEKFKEYKTEVENLLGKSLKT
LEKFKEYK EVEN L K++KT
Subjt: TLEKFKEYKTEVENLLGKSLKT
|
|
| KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa] | 3.5e-152 | 56.13 | Show/hide |
Query: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
+ Y+RW +ANEKA+ YI+ S+S+VLAKKHE ++TA+EIM+SLQEMFGQ S Q++HD+LKY++NARM EG+SVREHVLNMM HFN+ EMNGA IDE+SQVS
Subjt: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
Query: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
FILE+L +SFL + + N L ++ SL+ +G ++ FH + G K+ K+ K + A KK
Subjt: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
Query: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
K AA+ F + G P + +++ QGK DLLV ETCLVE+ DSAWI+DS ATNHVCSSFQ I SWQ L GE+T+RVG+ +VSA A+G
Subjt: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
Query: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
++L+ ++++LL+N+Y+VP RNL+S+ CLLEQ S++FN NK FI +NG ICSA LE++LYVL+ + K++LNTE+FKT T+ K+ K+SPKENAHL
Subjt: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
Query: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
WHLR G+INLNRIE+LVK+GLL+ELEENSL VCESC EGKMTKRPF+GKG+R KEPLELVH +LCGPMNVK RGG+EYF++F DYSRYGY+YLM KSE
Subjt: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
Query: TLEKFKEYKTEVENLLGKSLKT
LEKFKEYK EVEN L K++KT
Subjt: TLEKFKEYKTEVENLLGKSLKT
|
|
| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-151 | 56.13 | Show/hide |
Query: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
+ Y+RW +ANEKA+ YI+ S+S+VLAKKHE ++TA+EIM+SLQEMFGQ S Q++HD+LKY++NARM EG+SVREHVLNMM HFN+ EMNGA IDE+SQVS
Subjt: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
Query: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
FILE+L +SFL + + N L ++ SL+ +G ++ FH + G K+ K+ K + A KK
Subjt: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
Query: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
K AA+ F + G P + +++ QGK DLLV ETCLVE+ DSAWI+DS ATNHVCSSFQ I SW+ L GE+T+RVG+ +VSA A+G
Subjt: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
Query: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
++L ++++LL+N+Y+VP RNL+S+ CLLEQ S++FN NK FI +NG ICSA LE++LYVL+ + K++LNTE+FKT T+ K+ K+SPKENAHL
Subjt: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
Query: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
WHLR G+INLNRIE+LVK+GLL+ELEENSL VCESC EGKMTKRPF+GKG+R KEPLELVH DLCGPMNVK RGG+EYF++F DYSRYGY+YLM KSE
Subjt: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
Query: TLEKFKEYKTEVENLLGKSLKT
LEKFKEYK EVEN L K++KT
Subjt: TLEKFKEYKTEVENLLGKSLKT
|
|
| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-151 | 56.13 | Show/hide |
Query: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
+ Y+RW +ANEKA+ YI+ S+S+VLAKKHE ++TA+EIM+SLQEMFGQ S Q++HD+LKY++NARM EG+SVREHVLNMM HFN+ EMNGA IDE+SQVS
Subjt: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
Query: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
FILE+L +SFL + + N L ++ SL+ +G ++ FH + G K+ K+ K + A KK
Subjt: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
Query: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
K AA+ F + G P + +++ QGK DLLV ETCLVE+ DSAWI+DS ATNHVCSSFQ I SW+ L GE+T+RVG+ +VSA A+G
Subjt: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
Query: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
++L ++++LL+N+Y+VP RNL+S+ CLLEQ S++FN NK FI +NG ICSA LE++LYVL+ + K++LNTE+FKT T+ K+ K+SPKENAHL
Subjt: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
Query: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
WHLR G+INLNRIE+LVK+GLL+ELEENSL VCESC EGKMTKRPF+GKG+R KEPLELVH DLCGPMNVK RGG+EYF++F DYSRYGY+YLM KSE
Subjt: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
Query: TLEKFKEYKTEVENLLGKSLKT
LEKFKEYK EVEN L K++KT
Subjt: TLEKFKEYKTEVENLLGKSLKT
|
|
| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-151 | 56.13 | Show/hide |
Query: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
+ Y+RW +ANEKA+ YI+ S+S+VLAKKHE ++TA+EIM+SLQEMFGQ S Q++HD+LKY++NARM EG+SVREHVLNMM HFN+ EMNGA IDE+SQVS
Subjt: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
Query: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
FILE+L +SFL + + N L ++ SL+ +G ++ FH + G K+ K+ K + A KK
Subjt: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
Query: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
K AA+ F + G P + +++ QGK DLLV ETCLVE+ DSAWI+DS ATNHVCSSFQ I SW+ L GE+T+RVG+ +VSA A+G
Subjt: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
Query: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
++L ++++LL+N+Y+VP RNL+S+ CLLEQ S++FN NK FI +NG ICSA LE++LYVL+ + K++LNTE+FKT T+ K+ K+SPKENAHL
Subjt: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
Query: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
WHLR G+INLNRIE+LVK+GLL+ELEENSL VCESC EGKMTKRPF+GKG+R KEPLELVH DLCGPMNVK RGG+EYF++F DYSRYGY+YLM KSE
Subjt: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
Query: TLEKFKEYKTEVENLLGKSLKT
LEKFKEYK EVEN L K++KT
Subjt: TLEKFKEYKTEVENLLGKSLKT
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 4.9e-152 | 56.13 | Show/hide |
Query: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
+ Y+RW +ANEKA+ YI+ S+S+VLAKKHE ++TA+EIM+SLQEMFGQ S Q++HD+LKY++NARM EG+SVREHVLNMM HFN+ EMNGA IDE+SQVS
Subjt: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
Query: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
FILE+L +SFL + + N L ++ SL+ +G ++ FH + G K+ K+ K + A KK
Subjt: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
Query: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
K AA+ F + G P + +++ QGK DLLV ETCLVE+ DSAWI+DS ATNHVCSSFQ I SW+ L GE+T+RVG+ +VSA A+G
Subjt: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
Query: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
++L ++++LL+N+Y+VP RNL+S+ CLLEQ S++FN NK FI +NG ICSA LE++LYVL+ + K++LNTE+FKT T+ K+ K+SPKENAHL
Subjt: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
Query: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
WHLR G+INLNRIE+LVK+GLL+ELEENSL VCESC EGKMTKRPF+GKG+R KEPLELVH DLCGPMNVK RGG+EYF++F DYSRYGY+YLM KSE
Subjt: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
Query: TLEKFKEYKTEVENLLGKSLKT
LEKFKEYK EVEN L K++KT
Subjt: TLEKFKEYKTEVENLLGKSLKT
|
|
| A0A5A7TU93 Gag/pol protein | 1.7e-152 | 56.13 | Show/hide |
Query: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
+ Y+RW +ANEKA+ YI+ S+S+VLAKKHE ++TA+EIM+SLQEMFGQ S Q++HD+LKY++NARM EG+SVREHVLNMM HFN+ EMNGA IDE+SQVS
Subjt: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
Query: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
FILE+L +SFL + + N L ++ SL+ +G ++ FH + G K+ K+ K + A KK
Subjt: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
Query: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
K AA+ F + G P + +++ QGK DLLV ETCLVE+ DSAWI+DS ATNHVCSSFQ I SWQ L GE+T+RVG+ +VSA A+G
Subjt: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
Query: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
++L+ ++++LL+N+Y+VP RNL+S+ CLLEQ S++FN NK FI +NG ICSA LE++LYVL+ + K++LNTE+FKT T+ K+ K+SPKENAHL
Subjt: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
Query: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
WHLR G+INLNRIE+LVK+GLL+ELEENSL VCESC EGKMTKRPF+GKG+R KEPLELVH +LCGPMNVK RGG+EYF++F DYSRYGY+YLM KSE
Subjt: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
Query: TLEKFKEYKTEVENLLGKSLKT
LEKFKEYK EVEN L K++KT
Subjt: TLEKFKEYKTEVENLLGKSLKT
|
|
| A0A5A7TWB9 Gag/pol protein | 4.9e-152 | 56.13 | Show/hide |
Query: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
+ Y+RW +ANEKA+ YI+ S+S+VLAKKHE ++TA+EIM+SLQEMFGQ S Q++HD+LKY++NARM EG+SVREHVLNMM HFN+ EMNGA IDE+SQVS
Subjt: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
Query: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
FILE+L +SFL + + N L ++ SL+ +G ++ FH + G K+ K+ K + A KK
Subjt: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
Query: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
K AA+ F + G P + +++ QGK DLLV ETCLVE+ DSAWI+DS ATNHVCSSFQ I SW+ L GE+T+RVG+ +VSA A+G
Subjt: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
Query: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
++L ++++LL+N+Y+VP RNL+S+ CLLEQ S++FN NK FI +NG ICSA LE++LYVL+ + K++LNTE+FKT T+ K+ K+SPKENAHL
Subjt: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
Query: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
WHLR G+INLNRIE+LVK+GLL+ELEENSL VCESC EGKMTKRPF+GKG+R KEPLELVH DLCGPMNVK RGG+EYF++F DYSRYGY+YLM KSE
Subjt: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
Query: TLEKFKEYKTEVENLLGKSLKT
LEKFKEYK EVEN L K++KT
Subjt: TLEKFKEYKTEVENLLGKSLKT
|
|
| A0A5A7V4M1 Gag/pol protein | 4.9e-152 | 56.13 | Show/hide |
Query: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
+ Y+RW +ANEKA+ YI+ S+S+VLAKKHE ++TA+EIM+SLQEMFGQ S Q++HD+LKY++NARM EG+SVREHVLNMM HFN+ EMNGA IDE+SQVS
Subjt: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
Query: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
FILE+L +SFL + + N L ++ SL+ +G ++ FH + G K+ K+ K + A KK
Subjt: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
Query: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
K AA+ F + G P + +++ QGK DLLV ETCLVE+ DSAWI+DS ATNHVCSSFQ I SW+ L GE+T+RVG+ +VSA A+G
Subjt: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
Query: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
++L ++++LL+N+Y+VP RNL+S+ CLLEQ S++FN NK FI +NG ICSA LE++LYVL+ + K++LNTE+FKT T+ K+ K+SPKENAHL
Subjt: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
Query: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
WHLR G+INLNRIE+LVK+GLL+ELEENSL VCESC EGKMTKRPF+GKG+R KEPLELVH DLCGPMNVK RGG+EYF++F DYSRYGY+YLM KSE
Subjt: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
Query: TLEKFKEYKTEVENLLGKSLKT
LEKFKEYK EVEN L K++KT
Subjt: TLEKFKEYKTEVENLLGKSLKT
|
|
| A0A5D3CPJ6 Gag/pol protein | 4.9e-152 | 56.13 | Show/hide |
Query: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
+ Y+RW +ANEKA+ YI+ S+S+VLAKKHE ++TA+EIM+SLQEMFGQ S Q++HD+LKY++NARM EG+SVREHVLNMM HFN+ EMNGA IDE+SQVS
Subjt: DAYDRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVS
Query: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
FILE+L +SFL + + N L ++ SL+ +G ++ FH + G K+ K+ K + A KK
Subjt: FILETLQKSFLGPEQCQGIEN---------LRQMLPHMSLITGFDLRGRNSLL-----FH-----------AQKGKKRMKR------GKIDRVCAHKGKK
Query: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
K AA+ F + G P + +++ QGK DLLV ETCLVE+ DSAWI+DS ATNHVCSSFQ I SW+ L GE+T+RVG+ +VSA A+G
Subjt: VKDVAAERKVFP-PEWGRTLEEEPSQILGRERKNQGKADLLVTETCLVESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGK
Query: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
++L ++++LL+N+Y+VP RNL+S+ CLLEQ S++FN NK FI +NG ICSA LE++LYVL+ + K++LNTE+FKT T+ K+ K+SPKENAHL
Subjt: VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHL
Query: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
WHLR G+INLNRIE+LVK+GLL+ELEENSL VCESC EGKMTKRPF+GKG+R KEPLELVH DLCGPMNVK RGG+EYF++F DYSRYGY+YLM KSE
Subjt: WHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
Query: TLEKFKEYKTEVENLLGKSLKT
LEKFKEYK EVEN L K++KT
Subjt: TLEKFKEYKTEVENLLGKSLKT
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 7.6e-17 | 23.9 | Show/hide |
Query: DRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVSFIL
D W +A AK II +SD +TA++I+E+L ++ ++SL + K + + ++ S+ H + + GA I+E ++S +L
Subjt: DRWIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVSFIL
Query: ETLQKSFLGPEQCQGIENLRQMLPHMSLITGF--------DLRGRNSLLFHAQKGKKRMKRGKIDRVCAHKGKKVKD-VAAERKVFPPEWGRTLEEEPSQ
TL P GI + L +L F +++ +N H KK M + +K K+ V +K+F G + +
Subjt: ETLQKSFLGPEQCQGIENLRQMLPHMSLITGF--------DLRGRNSLLFHAQKGKKRMKRGKIDRVCAHKGKKVKD-VAAERKVFPPEWGRTLEEEPSQ
Query: ILGRE---------------RKNQGKADLLVTETC-----LVES-------SDSAWILDSSATNHVCSSFQ-EIDSWQLLREGEVTLRVGSRELVSAAAI
GRE KN+ + T T +V+ + ++LDS A++H+ + DS +++ ++ + E + A
Subjt: ILGRE---------------RKNQGKADLLVTETC-----LVES-------SDSAWILDSSATNHVCSSFQ-EIDSWQLLREGEVTLRVGSRELVSAAAI
Query: GKVKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENA
G V+L + I L+++ NL+S+ L E +S+ F+ + IS+NG L V+K + + + + F+ K K N
Subjt: GKVKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENA
Query: HLWHLREGYIN------LNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRT--KEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYG
LWH R G+I+ + R LLN L E S +CE C GK + PF +T K PL +VH D+CGP+ YFV F+ ++ Y
Subjt: HLWHLREGYIN------LNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRT--KEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYG
Query: YIYLMHKKSETLEKFKEYKTEVE
YL+ KS+ F+++ + E
Subjt: YIYLMHKKSETLEKFKEYKTEVE
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-17 | 21.93 | Show/hide |
Query: WIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVSFILET
W +E+A I + +SD + TA+ I L+ ++ ++L + K ++ M EG++ H+ + G I+E + +L +
Subjt: WIRANEKAKVYIIVSMSDVLAKKHELIVTAKEIMESLQEMFGQQSLQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLVEMNGASIDESSQVSFILET
Query: LQKSFLGPEQCQGIENLRQMLPHMSLITGFDLRGRNSLLFHAQKGKKRMK---------------------------RGKI-----DRV-----CAHKGK
L S+ +NL + H T +L+ S L +K +K+ + RGK RV C G
Subjt: LQKSFLGPEQCQGIENLRQMLPHMSLITGFDLRGRNSLLFHAQKGKKRMK---------------------------RGKI-----DRV-----CAHKGK
Query: KVKDVAAERKVFPPEWGRTLEEEPSQILGRERKNQGKADLLVT--ETCL-VESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEV-TLRVGSRELVSAA
+D RK G+ ++ + ++ +N L + E C+ + +S W++D++A++H + D + G+ T+++G+ A
Subjt: KVKDVAAERKVFPPEWGRTLEEEPSQILGRERKNQGKADLLVT--ETCL-VESSDSAWILDSSATNHVCSSFQEIDSWQLLREGEV-TLRVGSRELVSAA
Query: AIGK--VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSP
IG +K + G +L D + VP NL+S L F K +++ +I +LY + LN
Subjt: AIGK--VKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSP
Query: KENAHLWHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYL
+ + LWH R G+++ ++ L K L++ + ++ C+ C GK + F R L+LV+ D+CGPM ++ GG +YFV+FI D SR ++Y+
Subjt: KENAHLWHLREGYINLNRIEKLVKSGLLNELEENSLSVCESCFEGKMTKRPFSGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYL
Query: MHKKSETLEKFKEYKTEVENLLGKSLKTL
+ K + + F+++ VE G+ LK L
Subjt: MHKKSETLEKFKEYKTEVENLLGKSLKTL
|
|
| Q12337 Transposon Ty2-GR1 Gag-Pol polyprotein | 1.8e-10 | 23.57 | Show/hide |
Query: LEEEPSQILGRERKNQGKADLLVTETCLVESSDSA---WILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGKVKLHFGRNYILLDNMY
L ++ LG+++K T ++S+D ++DS A+ + S + E+ + ++ + AIG + +F
Subjt: LEEEPSQILGRERKNQGKADLLVTETCLVESSDSA---WILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGKVKLHFGRNYILLDNMY
Query: IVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEH-SLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHLWHLREGYINLNRIEK
P +L+S+S L Q I+ F N + R+ + + ++H Y L S K ++ + + K T K+K K L H G+ N I+K
Subjt: IVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLICSASLEH-SLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHLWHLREGYINLNRIEK
Query: LVKSGLLNELEENSLS-------VCESCFEGKMTKRPFSGKGYRTK-----EPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
+K + L+E+ + C C GK TK KG R K EP + +H D+ GP++ P+ YF+SF + +R+ ++Y +H + E
Subjt: LVKSGLLNELEENSLS-------VCESCFEGKMTKRPFSGKGYRTK-----EPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSE
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.4e-12 | 25 | Show/hide |
Query: SDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGKVKLHFGRNYILLDNMYIVPGFTRNLVSISCLLE-QCISVSFNGNKAFIS-
S + W+LDS AT+H+ S F + Q G+ + V + + G L + L N+ VP +NL+S+ L +SV F +
Subjt: SDSAWILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGKVKLHFGRNYILLDNMYIVPGFTRNLVSISCLLE-QCISVSFNGNKAFIS-
Query: -RNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHLWHLREGYINLNRIEKLVKSGLLNELE-ENSLSVCESCFEGKMTKRPF
G + + LY S + V LF A S K WH R G+ + + ++ + L+ L + C C K K PF
Subjt: -RNGNLICSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHLWHLREGYINLNRIEKLVKSGLLNELE-ENSLSVCESCFEGKMTKRPF
Query: SGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSETLEKFKEYKTEVEN
S + PLE ++ D+ + Y Y+V F+ ++RY ++Y + +KS+ E F +K +EN
Subjt: SGKGYRTKEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSETLEKFKEYKTEVEN
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 9.6e-12 | 23.7 | Show/hide |
Query: WILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGKVKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLI
W+LDS AT+H+ S F + Q G+ + + + G L + L+ + VP +NL+S+ L N N+ +
Subjt: WILDSSATNHVCSSFQEIDSWQLLREGEVTLRVGSRELVSAAAIGKVKLHFGRNYILLDNMYIVPGFTRNLVSISCLLEQCISVSFNGNKAFISRNGNLI
Query: CSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHLWHLREGYINLNRIEKLVKSGLLNELE-ENSLSVCESCFEGKMTKRPFSGKGYRT
L + +L+ K L +++ + A K WH R G+ +L + ++ + L L + L C CF K K PFS +
Subjt: CSASLEHSLYVLKPNSVKSVLNTELFKTTETRTKKAKVSPKENAHLWHLREGYINLNRIEKLVKSGLLNELE-ENSLSVCESCFEGKMTKRPFSGKGYRT
Query: KEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTL
+PLE ++ D+ + Y Y+V F+ ++RY ++Y + +KS+ + F +K+ VEN + TL
Subjt: KEPLELVHYDLCGPMNVKPRGGYEYFVSFIYDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTL
|
|
