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Tan0021835 (gene) of Snake gourd v1 genome

Gene IDTan0021835
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG05:11919975..11921758
RNA-Seq ExpressionTan0021835
SyntenyTan0021835
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146170.1 auxin-responsive protein SAUR21-like [Momordica charantia]2.7e-4595.79Show/hide
Query:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRLLSLVPHAKQILKMQS+FTKNQ+DVPK HVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]3.5e-4595.79Show/hide
Query:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIR LSLVPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

XP_022944366.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]7.9e-4594.74Show/hide
Query:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIR LSLVPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRF+VPI+YLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

XP_022947574.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]2.7e-4594.74Show/hide
Query:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRLLSLVPHAKQILKMQS+FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

XP_023512611.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]7.9e-4594.74Show/hide
Query:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIR LSLVPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQLL+HAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

TrEMBL top hitse value%identityAlignment
A0A6J1CWI9 auxin-responsive protein SAUR21-like1.3e-4595.79Show/hide
Query:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRLLSLVPHAKQILKMQS+FTKNQ+DVPK HVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

A0A6J1FVI4 auxin-responsive protein SAUR24-like1.7e-4595.79Show/hide
Query:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIR LSLVPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

A0A6J1G6U7 auxin-responsive protein SAUR21-like3.8e-4593.68Show/hide
Query:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRLLSLVPHAKQILKMQS+FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

A0A6J1G772 auxin-responsive protein SAUR21-like1.3e-4594.74Show/hide
Query:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIRLLSLVPHAKQILKMQS+FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

A0A6J1JHE3 auxin-responsive protein SAUR24-like1.7e-4595.79Show/hide
Query:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        MGIR LSLVPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQ
Subjt:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR224.0e-2363.29Show/hide
Query:  KMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +E+EFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  KMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR211.5e-2271.21Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        PKG +AVYVGE Q+KR++VP++YL+ PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR202.3e-2364.56Show/hide
Query:  KMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VPI+YLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSR Q
Subjt:  KMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR198.8e-2363.29Show/hide
Query:  KMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VP++YL+ PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  KMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.8e-2364.56Show/hide
Query:  KMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  KMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family9.4e-2861.05Show/hide
Query:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL
        M IR+  ++  +KQ+LK  S+ + N + +PKGH+AVYVGE +Q++RFVVP+TYL+HP FQ+LL  AEEEFGF HP GGLTIPC E  FIDL SRL
Subjt:  MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL

AT4G34790.1 SAUR-like auxin-responsive protein family9.7e-2554.21Show/hide
Query:  MGIRLLSLVPHAKQILKMQSNFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI
        MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVVPI+YLNHP F++ L+ AEEE GFHH  GGLTIPC+E++F+
Subjt:  MGIRLLSLVPHAKQILKMQSNFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI

Query:  DLTSRLQ
         L +  Q
Subjt:  DLTSRLQ

AT4G34810.1 SAUR-like auxin-responsive protein family4.6e-2757.14Show/hide
Query:  MGIRLLSLVPHAKQILKMQSNFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-
        MG+   ++    KQILK+ S   +N+        VPKGHVAVYVG   E+++KRFVVPI++LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL 
Subjt:  MGIRLLSLVPHAKQILKMQSNFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family7.9e-2758.76Show/hide
Query:  MGIRLLSLVPHAKQILK----MQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSR
        M IR+  ++  +KQIL+    + S+ + + LDVPKG++AVYVGE   KRFVVP++YL+ PSFQ LL  AEEEFGF HP GGLTIPC E+ FIDL SR
Subjt:  MGIRLLSLVPHAKQILK----MQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family1.3e-2464.56Show/hide
Query:  KMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  KMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTTAAGATGCAGTCAAATTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCTGTTTA
TGTGGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCAATAACTTACCTAAACCATCCATCGTTCCAGCAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATC
CACAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGAAGAGTTTGGATACAATCATCCTATGGGGGGTTTGACAATTCCC
TGCAGAGAAGATGCTTTCCTTGATCTCACTTCAAGGCTACATAGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTTAAGATGCAGTCAAATTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCTGTTTA
TGTGGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCAATAACTTACCTAAACCATCCATCGTTCCAGCAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATC
CACAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGAAGAGTTTGGATACAATCATCCTATGGGGGGTTTGACAATTCCC
TGCAGAGAAGATGCTTTCCTTGATCTCACTTCAAGGCTACATAGTTTTTGA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPHAKQILKMQSNFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQEEFGYNHPMGGLTIP
CREDAFLDLTSRLHSF