CuGenDBv2

Gene ID	Tan0021839
Organism	Trichosanthes anguina (Snake gourd v1)
Description	mediator of RNA polymerase II transcription subunit 33B-like
Genome location	LG07:74640756..74697206
RNA-Seq Expression	Tan0021839
Synteny	Tan0021839
Gene Ontology terms	GO:2000762 - regulation of phenylpropanoid metabolic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0016592 - mediator complex (cellular component)
InterPro domains	IPR039638 - Mediator of RNA polymerase II transcription subunit 33A/B

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008449381.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33B-like isoform X1 [Cucumis melo]

0.0e+00

83.16

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDPSEGPVPRLDTCLCMLLSI+TLAVTIIIEEEE E K E++CSPSK+RDEKQSSG CRKGLI SLQMLGEYE LLTPPQS+IAVANQAAAKAVMFISG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE
        VAVGNEYYDC SMND PINC              + LL   +  +   +   SS         +VGWSSFMKGS LT SMVNALVATPASSLAEIEKIYE
Subjt:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE

Query:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
        IA+NGSGDEKISAAS+LCGASLVRGW LQEHT LFI+RLL PPIP DYSG+DSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Subjt:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS

Query:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL
        SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSP DRLK RRLSKLLKFSL+P+FMDSFPKL
Subjt:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL

Query:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
        KGWYRQHQECIASIL GLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSA+EEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
Subjt:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL

Query:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE
        AT                                                                     GG+SPAMLPLPLAALISLTITYKLDKASE
Subjt:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE

Query:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV
        RLLALVGPALNS+AASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSN N+SGGVGTLLGHGFGSHVLGGMSPV
Subjt:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV

Query:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF
        APGILYLRVHRSVRD LF+VEEIVSLLML+VRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAM RVKLAASLGA+LVWISGGSGLVQSLFKETLPSWF
Subjt:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF

Query:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD
        LSVHSVEREGV YGGMVAVL G+ALAFFSVLCGTFSWGIDS+SS SKRRAKILDS+LEFLASALDGKFSIGCDWATWRAYVSGFVSL+VRCAPRWLLEVD
Subjt:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD

Query:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF
        LNVL  LS GLRQLNEEEL L LLESGGVNAMGAAAELIIEGGF
Subjt:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF

XP_016900752.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A-like isoform X2 [Cucumis melo]

0.0e+00

83.16

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDPSEGPVPRLDTCLCMLLSI+TLAVTIIIEEEE E K E++CSPSK+RDEKQSSG CRKGLI SLQMLGEYE LLTPPQS+IAVANQAAAKAVMFISG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE
        VAVGNEYYDC SMND PINC              + LL   +  +   +   SS         +VGWSSFMKGS LT SMVNALVATPASSLAEIEKIYE
Subjt:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE

Query:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
        IA+NGSGDEKISAAS+LCGASLVRGW LQEHT LFI+RLL PPIP DYSG+DSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Subjt:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS

Query:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL
        SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSP DRLK RRLSKLLKFSL+P+FMDSFPKL
Subjt:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL

Query:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
        KGWYRQHQECIASIL GLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSA+EEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
Subjt:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL

Query:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE
        AT                                                                     GG+SPAMLPLPLAALISLTITYKLDKASE
Subjt:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE

Query:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV
        RLLALVGPALNS+AASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSN N+SGGVGTLLGHGFGSHVLGGMSPV
Subjt:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV

Query:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF
        APGILYLRVHRSVRD LF+VEEIVSLLML+VRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAM RVKLAASLGA+LVWISGGSGLVQSLFKETLPSWF
Subjt:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF

Query:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD
        LSVHSVEREGV YGGMVAVL G+ALAFFSVLCGTFSWGIDS+SS SKRRAKILDS+LEFLASALDGKFSIGCDWATWRAYVSGFVSL+VRCAPRWLLEVD
Subjt:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD

Query:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF
        LNVL  LS GLRQLNEEEL L LLESGGVNAMGAAAELIIEGGF
Subjt:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF

XP_022155567.1 mediator of RNA polymerase II transcription subunit 33B-like [Momordica charantia]

0.0e+00

83.69

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEE+EGELKEE+ECSPSK RDEK+ SGKCRKGLI SLQMLGEYEGLLTPPQSV A+ANQAAAKAVMFISG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE
        VAVGNEYYDC+SMNDTP+NC              + LL      +   +   SS         +VGWSSFMKGSSLTLSMV+ALVATPASSLAEIEKIYE
Subjt:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE

Query:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
        IAVNGSGDEKISAAS+LCG SLVRGWNLQEHTVLFIARLLSPPIPADYSG+DSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 
Subjt:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS

Query:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL
        SPPKSW+LTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVK DARPVGSQLTPEYLLLVRNSQLASFGKSPKDR KVRRLSKLLKFSLEP+FMDSFPKL
Subjt:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL

Query:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
        KGWYRQHQECIASIL GLVPGAPVHQIVDALLTMMFRKINRGG SLTSTTSGSSNSSGSA+EEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
Subjt:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL

Query:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE
        AT                                                                     GG SPAMLPLPLAALISLTITYKLDKASE
Subjt:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE

Query:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV
        RLLALVGPALN++AASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSN+NS+GGVGTLLGHGFGSHVLGGMSPV
Subjt:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV

Query:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF
        APGILYLRVHRSVRDALFMVEEIVSLLML+VRDIAVSGLP+EKAEKLKKTK+GMRYEQVSFASAM+RVKLAASLGA+LVWISGGSGLVQSLFKETLPSWF
Subjt:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF

Query:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD
        LSVHS+EREGV YGGMVAVLGGYALAFFSVLCGTFSWGIDS SS SKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAP+W++EVD
Subjt:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD

Query:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF
        +N+LK LS GLRQL+EEELALALLESGGV AMGAAAELIIEGGF
Subjt:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF

XP_038887593.1 mediator of RNA polymerase II transcription subunit 33B isoform X1 [Benincasa hispida]

0.0e+00

83.26

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDPSEGPVPRLDTCLCMLLSI+TLAVTIIIEEEEGE+K E+ECS SK+RDEKQSSG CRKGLI SLQMLGEYE LL PPQSVIAVANQAAAKAVMFISG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINCCKTLLTL---------------------CSKLFGSVIGIYSSAMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE
        VAVGNEY+DC+SM+DTPINC   +  L                      +     V    SS +VGWSSFMKGSSLT SMVNALVATPASSLAEIEKIYE
Subjt:  VAVGNEYYDCISMNDTPINCCKTLLTL---------------------CSKLFGSVIGIYSSAMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE

Query:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
        IA+NGSGDEKISAAS+LCGASLVRGWNLQEHT LFI+RLLSPPIP DYSG++SYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Subjt:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS

Query:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL
          PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLK RRLSKLLKFSLEP+FMDSFPKL
Subjt:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL

Query:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
        KGWYRQHQECIASIL GL+PGAPVHQIVDALLTMMFRKINR GQSLTSTTSGSSNSSGSA+EEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
Subjt:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL

Query:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE
        AT                                                                     GG+SPAMLPLPLAALISLTITYKLDKASE
Subjt:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE

Query:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV
        RLLALVGPALNS+AASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHH SDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV
Subjt:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV

Query:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF
        APGILYLRVHRSVRD LF+VEEIVSLLML+VRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAM RVKLAASLGA+LVWISGGSGLVQSLFKETLPSWF
Subjt:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF

Query:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD
        LSV SVEREGV YGGMVAVL GYALAFFSVLCGTFSWGIDS+SS SKRRAKILDS LEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD
Subjt:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD

Query:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF
        LN+LK LS GLRQLNEE+LALALL SGGV AMGAAAELIIEGGF
Subjt:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF

XP_038887594.1 mediator of RNA polymerase II transcription subunit 33A isoform X2 [Benincasa hispida]

0.0e+00

83.26

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDPSEGPVPRLDTCLCMLLSI+TLAVTIIIEEEEGE+K E+ECS SK+RDEKQSSG CRKGLI SLQMLGEYE LL PPQSVIAVANQAAAKAVMFISG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINCCKTLLTL---------------------CSKLFGSVIGIYSSAMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE
        VAVGNEY+DC+SM+DTPINC   +  L                      +     V    SS +VGWSSFMKGSSLT SMVNALVATPASSLAEIEKIYE
Subjt:  VAVGNEYYDCISMNDTPINCCKTLLTL---------------------CSKLFGSVIGIYSSAMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE

Query:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
        IA+NGSGDEKISAAS+LCGASLVRGWNLQEHT LFI+RLLSPPIP DYSG++SYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Subjt:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS

Query:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL
          PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLK RRLSKLLKFSLEP+FMDSFPKL
Subjt:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL

Query:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
        KGWYRQHQECIASIL GL+PGAPVHQIVDALLTMMFRKINR GQSLTSTTSGSSNSSGSA+EEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
Subjt:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL

Query:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE
        AT                                                                     GG+SPAMLPLPLAALISLTITYKLDKASE
Subjt:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE

Query:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV
        RLLALVGPALNS+AASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHH SDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV
Subjt:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV

Query:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF
        APGILYLRVHRSVRD LF+VEEIVSLLML+VRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAM RVKLAASLGA+LVWISGGSGLVQSLFKETLPSWF
Subjt:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF

Query:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD
        LSV SVEREGV YGGMVAVL GYALAFFSVLCGTFSWGIDS+SS SKRRAKILDS LEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD
Subjt:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD

Query:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF
        LN+LK LS GLRQLNEE+LALALL SGGV AMGAAAELIIEGGF
Subjt:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BMJ1 mediator of RNA polymerase II transcription subunit 33B-like isoform X1

0.0e+00

83.16

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDPSEGPVPRLDTCLCMLLSI+TLAVTIIIEEEE E K E++CSPSK+RDEKQSSG CRKGLI SLQMLGEYE LLTPPQS+IAVANQAAAKAVMFISG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE
        VAVGNEYYDC SMND PINC              + LL   +  +   +   SS         +VGWSSFMKGS LT SMVNALVATPASSLAEIEKIYE
Subjt:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE

Query:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
        IA+NGSGDEKISAAS+LCGASLVRGW LQEHT LFI+RLL PPIP DYSG+DSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Subjt:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS

Query:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL
        SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSP DRLK RRLSKLLKFSL+P+FMDSFPKL
Subjt:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL

Query:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
        KGWYRQHQECIASIL GLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSA+EEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
Subjt:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL

Query:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE
        AT                                                                     GG+SPAMLPLPLAALISLTITYKLDKASE
Subjt:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE

Query:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV
        RLLALVGPALNS+AASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSN N+SGGVGTLLGHGFGSHVLGGMSPV
Subjt:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV

Query:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF
        APGILYLRVHRSVRD LF+VEEIVSLLML+VRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAM RVKLAASLGA+LVWISGGSGLVQSLFKETLPSWF
Subjt:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF

Query:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD
        LSVHSVEREGV YGGMVAVL G+ALAFFSVLCGTFSWGIDS+SS SKRRAKILDS+LEFLASALDGKFSIGCDWATWRAYVSGFVSL+VRCAPRWLLEVD
Subjt:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD

Query:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF
        LNVL  LS GLRQLNEEEL L LLESGGVNAMGAAAELIIEGGF
Subjt:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF

A0A1S4DXP9 mediator of RNA polymerase II transcription subunit 33A-like isoform X2

0.0e+00

83.16

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDPSEGPVPRLDTCLCMLLSI+TLAVTIIIEEEE E K E++CSPSK+RDEKQSSG CRKGLI SLQMLGEYE LLTPPQS+IAVANQAAAKAVMFISG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE
        VAVGNEYYDC SMND PINC              + LL   +  +   +   SS         +VGWSSFMKGS LT SMVNALVATPASSLAEIEKIYE
Subjt:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE

Query:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
        IA+NGSGDEKISAAS+LCGASLVRGW LQEHT LFI+RLL PPIP DYSG+DSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Subjt:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS

Query:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL
        SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSP DRLK RRLSKLLKFSL+P+FMDSFPKL
Subjt:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL

Query:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
        KGWYRQHQECIASIL GLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSA+EEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
Subjt:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL

Query:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE
        AT                                                                     GG+SPAMLPLPLAALISLTITYKLDKASE
Subjt:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE

Query:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV
        RLLALVGPALNS+AASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSN N+SGGVGTLLGHGFGSHVLGGMSPV
Subjt:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV

Query:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF
        APGILYLRVHRSVRD LF+VEEIVSLLML+VRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAM RVKLAASLGA+LVWISGGSGLVQSLFKETLPSWF
Subjt:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF

Query:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD
        LSVHSVEREGV YGGMVAVL G+ALAFFSVLCGTFSWGIDS+SS SKRRAKILDS+LEFLASALDGKFSIGCDWATWRAYVSGFVSL+VRCAPRWLLEVD
Subjt:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD

Query:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF
        LNVL  LS GLRQLNEEEL L LLESGGVNAMGAAAELIIEGGF
Subjt:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF

A0A5A7UV60 Mediator of RNA polymerase II transcription subunit 33A-like isoform X2

0.0e+00

82.77

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDPSEGPVPRLDTCLCMLLSI+TLAVTIIIEEEE E K E++CSPSK+RDEKQSSG CRKGLI SLQMLGEYE LLTPPQS+IAVANQAAAKAVMFISG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE
        VAVGNEYYDC SMND PINC              + LL   +  +   +   SS         +VGWSSFMKGS LT SMVNALVATPASSLAEIEKIYE
Subjt:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE

Query:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
        IA+NGSGDEKISAAS+LCGASLVRGW LQEHT LFI+RLL PPIP DYSG+DSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Subjt:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS

Query:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL
        SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSP DRLK RRLSKLLKFSL+P+FMDSFPKL
Subjt:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL

Query:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSP---
        KGWYRQHQECIASIL GLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSA+EEASIKLKVPAWDILEATPFVLDAALTACAHGRLSP   
Subjt:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSP---

Query:  ------RD--------------------------------------------------------------LATGGTSPAMLPLPLAALISLTITYKLDKA
              +D                                                              LA GG+SPAMLPLPLAALISLTITYKLDKA
Subjt:  ------RD--------------------------------------------------------------LATGGTSPAMLPLPLAALISLTITYKLDKA

Query:  SERLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMS
        SERLLALVGPALNS+AASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSN N+SGGVGTLLGHGFGSHVLGGMS
Subjt:  SERLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMS

Query:  PVAPGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPS
        PVAPGILYLRVHRSVRD LF+VEEIVSLLML+VRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAM RVKLAASLGA+LVWISGGSGLVQSLFKETLPS
Subjt:  PVAPGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPS

Query:  WFLSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLE
        WFLSVHSVEREGV YGGMVAVL G+ALAFFSVLCGTFSWGIDS+SS SKRRAKILDS+LEFLASALDGKFSIGCDWATWRAYVSGFVSL+VRCAPRWLLE
Subjt:  WFLSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLE

Query:  VDLNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF
        VDLNVL  LS GLRQLNEEEL L LLESGGVNAMGAAAELIIEGGF
Subjt:  VDLNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF

A0A6J1DPP9 mediator of RNA polymerase II transcription subunit 33B-like

0.0e+00

83.69

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEE+EGELKEE+ECSPSK RDEK+ SGKCRKGLI SLQMLGEYEGLLTPPQSV A+ANQAAAKAVMFISG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE
        VAVGNEYYDC+SMNDTP+NC              + LL      +   +   SS         +VGWSSFMKGSSLTLSMV+ALVATPASSLAEIEKIYE
Subjt:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGIYSS--------AMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE

Query:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
        IAVNGSGDEKISAAS+LCG SLVRGWNLQEHTVLFIARLLSPPIPADYSG+DSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFG 
Subjt:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS

Query:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL
        SPPKSW+LTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVK DARPVGSQLTPEYLLLVRNSQLASFGKSPKDR KVRRLSKLLKFSLEP+FMDSFPKL
Subjt:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL

Query:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
        KGWYRQHQECIASIL GLVPGAPVHQIVDALLTMMFRKINRGG SLTSTTSGSSNSSGSA+EEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
Subjt:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL

Query:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE
        AT                                                                     GG SPAMLPLPLAALISLTITYKLDKASE
Subjt:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE

Query:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV
        RLLALVGPALN++AASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSN+NS+GGVGTLLGHGFGSHVLGGMSPV
Subjt:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV

Query:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF
        APGILYLRVHRSVRDALFMVEEIVSLLML+VRDIAVSGLP+EKAEKLKKTK+GMRYEQVSFASAM+RVKLAASLGA+LVWISGGSGLVQSLFKETLPSWF
Subjt:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF

Query:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD
        LSVHS+EREGV YGGMVAVLGGYALAFFSVLCGTFSWGIDS SS SKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAP+W++EVD
Subjt:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD

Query:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF
        +N+LK LS GLRQL+EEELALALLESGGV AMGAAAELIIEGGF
Subjt:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF

A0A6J1HFH4 mediator of RNA polymerase II transcription subunit 33B-like

0.0e+00

82.52

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEE+ECSPSK+RDEKQSSGK R+GLI SLQMLGEYE LLTPPQSVI VANQAAAKAVMFISG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGI--------YSSAMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE
        VAVGNEYYDC+SMNDTPINC              + LL   +  +   +           SS +VGWSSFMKGSSLT SMVNALVATPASSLAEIEKIYE
Subjt:  VAVGNEYYDCISMNDTPINC-------------CKTLLTLCSKLFGSVIGI--------YSSAMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE

Query:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
        IA+NGSGDEKISAAS+LCGASLVRGWNLQEHTVLFI+RLLSPPIPADY G+DSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
Subjt:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS

Query:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL
        S PKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEP FMDSFPKL
Subjt:  SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKL

Query:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
        KGWYRQHQECIASI PGLVPGAPVHQ VDALLTMMF+KINRGGQSLTSTTS SSNSSGSA+EEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL
Subjt:  KGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDL

Query:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE
        AT                                                                     GG+ PAMLPLPLAALISLTITYKLDKASE
Subjt:  AT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKASE

Query:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV
        RLLALVGPALNS+ A CSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNS GGVG LLGHGFGSHVLGGMSP 
Subjt:  RLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPV

Query:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF
        APGILYLRVHR VRDALF+VEEIVSLLML+V+DIAV+GLPKEKAEKLKK+K+GMR EQVSFASAM RVKLAASLGA+LVWISGGSGLVQSL+KETLPSWF
Subjt:  APGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWF

Query:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD
        LSVHSV+REGV YGGMV VL GYALAFFSVLCGTFSWGIDS SS SKRRAK+LDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSL+VRCAP+WLLEVD
Subjt:  LSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVD

Query:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF
        L VLK L KGLRQLNEEELALALLESGG+ AMGAAAELII GGF
Subjt:  LNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF

SwissProt top hits

e value

%identity

Alignment

F4IN69 Mediator of RNA polymerase II transcription subunit 33B

2.2e-303

60.22

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDP EGPVPR DT LC+LLS+T LAV  IIEEEE +  ++   SPS    EK+  GKCR+GLI SLQ LG+YE LLTPP+SV +VANQAAAKA+MFISG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINCCKTLLTLCSKLFGSVIGIYSSAMVG-WSSFMKGSSLTLSMVNALVATPASSLAEIEKIYEIAVNGSGDEKISAASVLCGA
        +   N  Y+  SM+++   CCK   +L +     V+G+Y    +  WS  MKGS LT S+ N+L+ TPASSLAEIEK+YE+A  GS DEKI+ AS+LCGA
Subjt:  VAVGNEYYDCISMNDTPINCCKTLLTLCSKLFGSVIGIYSSAMVG-WSSFMKGSSLTLSMVNALVATPASSLAEIEKIYEIAVNGSGDEKISAASVLCGA

Query:  SLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPK-SWILTSGEELTCHAV
        SL RGW++QEH ++FI  LLSPP PAD SG+ S+LI+ APFLNVLLVGIS +DCV IFSLHG+VPLLAG LMPICEAFGS  P  +W L +GE ++ HAV
Subjt:  SLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPK-SWILTSGEELTCHAV

Query:  FSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKLKGWYRQHQECIASILPGLV
        FS AFTLLLRLWRF HPP++ V GD  PVG Q +PEYLLLVRN +L  FGKSPKDR+  RR SK++  S++P+FMDSFP+LK WYRQHQEC+ASIL  L 
Subjt:  FSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKLKGWYRQHQECIASILPGLV

Query:  PGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATG----------------
         G+PVH IVD+LL+MMF+K N+GG    + +SGSS+ S S  +++S +LK+PAWDILEA PFVLDAALTACAHG LSPR+LATG                
Subjt:  PGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATG----------------

Query:  -----------------------------------------------------GTSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSW
                                                             G S A LPLPLAAL+SLTITYKLDKA+ER L LVGPAL+S+AA+C W
Subjt:  -----------------------------------------------------GTSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSW

Query:  PCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGL-GNSNVNSSGGVGTLLGHGFGSHVLGGMSPVAPGILYLRVHRSVRDALF
        PC PI+ SLW QKVKRW+DFL+FSASRTVFHHN DAV+QLL+SCFT TLGL   S + S GGVG LLGHGFGS   GG+S  APGILY++VHRS+RD +F
Subjt:  PCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGL-GNSNVNSSGGVGTLLGHGFGSHVLGGMSPVAPGILYLRVHRSVRDALF

Query:  MVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRY--EQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWFLSVHSVEREGVGYGGM
        + EEI+SLLM +V+ IA   LP  +AEKLKKTK G RY   QVS + AM RVKLAASLGA+LVWISGG  LVQ+L KETLPSWF+SVH  E E    GGM
Subjt:  MVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRY--EQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWFLSVHSVEREGVGYGGM

Query:  VAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVDLNVLKSLSKGLRQLNE
        V +L GYALA+F++L   F+WG+DS+   SKRR ++L  HLEF+ SAL+GK S+GCDWATW+AYV+GFVSLMV+C P W+LEVD+ V+K LSK LRQ NE
Subjt:  VAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVDLNVLKSLSKGLRQLNE

Query:  EELALALLESGGVNAMGAAAELIIE
        ++LALALL +GG+  MGAA ELI+E
Subjt:  EELALALLESGGVNAMGAAAELIIE

Q9LUG9 Mediator of RNA polymerase II transcription subunit 33A

1.3e-266

54.08

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDP EGP+PRLDT LCM L I  L V  +IEE + E   E                K R  L+ SLQ+LG++ GLL PP+ V++ AN+AA KA++F+SG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINCCKTL--LTLCSKLFGSVIGIYSSAMVG-------------------WSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE
          VG   +D I+M D P+NC   +  L + + +  +++ + + +  G                   WSSF+KG+ L  +MVN LV+ PASSLAE+EK++E
Subjt:  VAVGNEYYDCISMNDTPINCCKTL--LTLCSKLFGSVIGIYSSAMVG-------------------WSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE

Query:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
        +AV GS DEKISAA+VLCGASL RGWN+QEHTV ++ RLLSPP+PADYS  +++LI YA  LNV++VGI SVD +QIFSLHGMVP LA  LMPICE FGS
Subjt:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS

Query:  -SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLK-FSLEPVFMDSFP
         +P  SW L SGE ++ ++VFS AFTLLL+LWRF+HPP+E+  GD   VGSQLTPE+LL VRNS L S     +DR + +RLS++ +  S +PVF+DSFP
Subjt:  -SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLK-FSLEPVFMDSFP

Query:  KLKGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR
        KLK WYRQHQ CIA+ L GL  G+PVHQ V+ALL M F K+ RG Q+L    SG+S+SSG+ASE+++I+ + PAWDIL+A P+V+DAALTAC HGRLSPR
Subjt:  KLKGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR

Query:  DLAT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKA
         LAT                                                                     GG+SPA LPLPLAA +SLTITYK+DKA
Subjt:  DLAT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKA

Query:  SERLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMS
        SER L L GPAL  +AA C WPC PI+ASLW QK KRW DFLVFSASRTVF HN DAV+QLL++CF++TLGL  + +++ GGVG LLGHGFGSH  GG+S
Subjt:  SERLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMS

Query:  PVAPGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPS
        PVAPGILYLR++R++RD + + EEI+SLL+ +V DIA + L KEK EKLK  K G RY Q S A+AMT+VKLAASL A+LVW++GG G+V  L KET+PS
Subjt:  PVAPGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPS

Query:  WFLSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAK-ILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLL
        WFLS    +RE  G   +VA L G+ALA+F VLCG  +WG+DS SS SKRR + IL SHLEF+ASALDGK S+GC+ ATWR Y+SG VSLMV C P W+ 
Subjt:  WFLSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAK-ILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLL

Query:  EVDLNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELII
        E+D  VLKSLS GLR+  ++ELA+ LL  GG+  M  AA+ II
Subjt:  EVDLNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELII

Arabidopsis top hits

e value

%identity

Alignment

AT2G48110.1 reduced epidermal fluorescence 4

1.6e-304

60.22

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDP EGPVPR DT LC+LLS+T LAV  IIEEEE +  ++   SPS    EK+  GKCR+GLI SLQ LG+YE LLTPP+SV +VANQAAAKA+MFISG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINCCKTLLTLCSKLFGSVIGIYSSAMVG-WSSFMKGSSLTLSMVNALVATPASSLAEIEKIYEIAVNGSGDEKISAASVLCGA
        +   N  Y+  SM+++   CCK   +L +     V+G+Y    +  WS  MKGS LT S+ N+L+ TPASSLAEIEK+YE+A  GS DEKI+ AS+LCGA
Subjt:  VAVGNEYYDCISMNDTPINCCKTLLTLCSKLFGSVIGIYSSAMVG-WSSFMKGSSLTLSMVNALVATPASSLAEIEKIYEIAVNGSGDEKISAASVLCGA

Query:  SLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPK-SWILTSGEELTCHAV
        SL RGW++QEH ++FI  LLSPP PAD SG+ S+LI+ APFLNVLLVGIS +DCV IFSLHG+VPLLAG LMPICEAFGS  P  +W L +GE ++ HAV
Subjt:  SLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPK-SWILTSGEELTCHAV

Query:  FSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKLKGWYRQHQECIASILPGLV
        FS AFTLLLRLWRF HPP++ V GD  PVG Q +PEYLLLVRN +L  FGKSPKDR+  RR SK++  S++P+FMDSFP+LK WYRQHQEC+ASIL  L 
Subjt:  FSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKLKGWYRQHQECIASILPGLV

Query:  PGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATG----------------
         G+PVH IVD+LL+MMF+K N+GG    + +SGSS+ S S  +++S +LK+PAWDILEA PFVLDAALTACAHG LSPR+LATG                
Subjt:  PGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATG----------------

Query:  -----------------------------------------------------GTSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSW
                                                             G S A LPLPLAAL+SLTITYKLDKA+ER L LVGPAL+S+AA+C W
Subjt:  -----------------------------------------------------GTSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSW

Query:  PCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGL-GNSNVNSSGGVGTLLGHGFGSHVLGGMSPVAPGILYLRVHRSVRDALF
        PC PI+ SLW QKVKRW+DFL+FSASRTVFHHN DAV+QLL+SCFT TLGL   S + S GGVG LLGHGFGS   GG+S  APGILY++VHRS+RD +F
Subjt:  PCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGL-GNSNVNSSGGVGTLLGHGFGSHVLGGMSPVAPGILYLRVHRSVRDALF

Query:  MVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRY--EQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWFLSVHSVEREGVGYGGM
        + EEI+SLLM +V+ IA   LP  +AEKLKKTK G RY   QVS + AM RVKLAASLGA+LVWISGG  LVQ+L KETLPSWF+SVH  E E    GGM
Subjt:  MVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRY--EQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWFLSVHSVEREGVGYGGM

Query:  VAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVDLNVLKSLSKGLRQLNE
        V +L GYALA+F++L   F+WG+DS+   SKRR ++L  HLEF+ SAL+GK S+GCDWATW+AYV+GFVSLMV+C P W+LEVD+ V+K LSK LRQ NE
Subjt:  VAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVDLNVLKSLSKGLRQLNE

Query:  EELALALLESGGVNAMGAAAELIIE
        ++LALALL +GG+  MGAA ELI+E
Subjt:  EELALALLESGGVNAMGAAAELIIE

AT3G23590.1 REF4-related 1

9.1e-268

54.08

Show/hide

Query:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG
        ERDP EGP+PRLDT LCM L I  L V  +IEE + E   E                K R  L+ SLQ+LG++ GLL PP+ V++ AN+AA KA++F+SG
Subjt:  ERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISG

Query:  VAVGNEYYDCISMNDTPINCCKTL--LTLCSKLFGSVIGIYSSAMVG-------------------WSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE
          VG   +D I+M D P+NC   +  L + + +  +++ + + +  G                   WSSF+KG+ L  +MVN LV+ PASSLAE+EK++E
Subjt:  VAVGNEYYDCISMNDTPINCCKTL--LTLCSKLFGSVIGIYSSAMVG-------------------WSSFMKGSSLTLSMVNALVATPASSLAEIEKIYE

Query:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS
        +AV GS DEKISAA+VLCGASL RGWN+QEHTV ++ RLLSPP+PADYS  +++LI YA  LNV++VGI SVD +QIFSLHGMVP LA  LMPICE FGS
Subjt:  IAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLLSPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS

Query:  -SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLK-FSLEPVFMDSFP
         +P  SW L SGE ++ ++VFS AFTLLL+LWRF+HPP+E+  GD   VGSQLTPE+LL VRNS L S     +DR + +RLS++ +  S +PVF+DSFP
Subjt:  -SPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLK-FSLEPVFMDSFP

Query:  KLKGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR
        KLK WYRQHQ CIA+ L GL  G+PVHQ V+ALL M F K+ RG Q+L    SG+S+SSG+ASE+++I+ + PAWDIL+A P+V+DAALTAC HGRLSPR
Subjt:  KLKGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSASEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPR

Query:  DLAT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKA
         LAT                                                                     GG+SPA LPLPLAA +SLTITYK+DKA
Subjt:  DLAT---------------------------------------------------------------------GGTSPAMLPLPLAALISLTITYKLDKA

Query:  SERLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMS
        SER L L GPAL  +AA C WPC PI+ASLW QK KRW DFLVFSASRTVF HN DAV+QLL++CF++TLGL  + +++ GGVG LLGHGFGSH  GG+S
Subjt:  SERLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMS

Query:  PVAPGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPS
        PVAPGILYLR++R++RD + + EEI+SLL+ +V DIA + L KEK EKLK  K G RY Q S A+AMT+VKLAASL A+LVW++GG G+V  L KET+PS
Subjt:  PVAPGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPS

Query:  WFLSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAK-ILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLL
        WFLS    +RE  G   +VA L G+ALA+F VLCG  +WG+DS SS SKRR + IL SHLEF+ASALDGK S+GC+ ATWR Y+SG VSLMV C P W+ 
Subjt:  WFLSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAK-ILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLL

Query:  EVDLNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELII
        E+D  VLKSLS GLR+  ++ELA+ LL  GG+  M  AA+ II
Subjt:  EVDLNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELII

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGAGGGATCCTAGTGAGGGTCCTGTACCACGTTTGGATACATGCTTGTGCATGTTGTTGTCTATTACAACCCTTGCAGTCACCATTATTATTGAAGAAGAGGAAGG
TGAACTTAAGGAGGAGGAGGAATGCAGCCCAAGTAAAACCAGAGATGAGAAACAGTCTTCAGGAAAGTGCCGCAAAGGTTTGATTATGAGCTTGCAGATGTTGGGTGAAT
ATGAGGGCTTGCTGACTCCTCCTCAATCCGTTATTGCAGTAGCCAATCAGGCTGCAGCAAAAGCAGTAATGTTCATATCAGGGGTTGCAGTTGGTAATGAGTACTATGAC
TGTATTAGTATGAATGATACACCTATTAACTGTTGTAAGACATTATTGACTTTATGCTCAAAATTGTTTGGTTCAGTCATTGGCATTTATTCATCTGCAATGGTTGGTTG
GTCATCATTCATGAAAGGGTCCTCCCTAACTCTGTCAATGGTGAATGCTTTAGTGGCAACTCCAGCTTCTAGCTTAGCTGAGATTGAGAAGATCTACGAGATTGCAGTAA
ATGGTTCAGGTGACGAGAAGATATCTGCAGCTTCTGTTTTGTGTGGGGCATCACTTGTTCGAGGCTGGAATCTACAGGAACACACTGTTCTATTTATAGCCAGATTATTG
TCGCCACCAATTCCTGCAGATTACTCTGGCAATGATAGCTATTTGATCGACTATGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGCGTGCAGAT
TTTTTCCTTACATGGCATGGTTCCTCTACTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCGAGTCCCCCCAAGTCATGGATCCTTACATCTGGGGAAGAGC
TTACTTGTCATGCAGTGTTCTCCTTAGCATTTACACTTCTACTGAGGTTGTGGCGGTTTCATCATCCACCTGTTGAAAATGTGAAGGGAGATGCACGACCTGTGGGATCT
CAACTAACTCCTGAATATCTGCTATTGGTTCGAAATTCTCAGTTAGCGTCTTTTGGAAAGTCACCCAAGGATCGACTTAAAGTTAGACGGCTGTCAAAATTATTGAAATT
TTCTTTAGAACCTGTATTTATGGATTCCTTTCCAAAATTGAAAGGCTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCTCCCTGGTCTTGTACCTGGGGCCCCTG
TTCATCAAATTGTTGATGCTCTCTTGACTATGATGTTCAGGAAGATAAATCGTGGTGGACAGTCTTTGACTTCAACAACTTCAGGAAGCAGCAACTCTTCTGGATCTGCA
AGTGAAGAGGCCTCTATTAAGCTTAAAGTGCCTGCATGGGACATCCTTGAAGCAACTCCCTTCGTTCTTGATGCTGCTCTTACTGCCTGTGCTCATGGACGATTGTCTCC
CCGTGATTTGGCTACAGGTGGGACTTCTCCGGCTATGCTTCCCTTACCCTTGGCTGCCCTAATAAGCCTCACAATAACCTATAAACTGGATAAAGCCTCTGAACGCCTTC
TTGCGCTCGTTGGCCCAGCGCTGAATTCAATTGCTGCTAGTTGTTCGTGGCCTTGCACACCTATCATAGCCTCATTATGGGCTCAGAAGGTGAAGCGATGGAATGACTTC
TTAGTGTTCTCTGCTTCTCGCACTGTTTTTCACCATAACAGTGATGCTGTTGTCCAGCTACTTAAGAGTTGTTTCACTTCAACTCTCGGTTTAGGCAACTCCAATGTAAA
CAGCAGTGGAGGTGTAGGCACACTCCTTGGTCACGGTTTTGGCTCTCACGTTTTAGGAGGGATGTCTCCGGTGGCTCCTGGGATTCTCTATCTGCGAGTACATCGATCTG
TGAGAGATGCTTTGTTCATGGTGGAGGAGATCGTCTCTCTTTTAATGCTCACGGTCAGAGATATTGCGGTTAGTGGGCTACCAAAGGAGAAGGCTGAAAAACTAAAGAAG
ACCAAGTATGGAATGAGATATGAGCAGGTTTCTTTTGCTTCTGCAATGACACGTGTCAAACTTGCAGCTTCCTTAGGAGCTGCATTAGTTTGGATATCCGGTGGATCAGG
TTTGGTCCAATCTTTGTTTAAAGAAACCTTGCCGTCTTGGTTTTTATCAGTCCATTCAGTAGAGCGTGAAGGTGTAGGATATGGAGGTATGGTTGCTGTGCTTGGGGGCT
ATGCACTGGCATTCTTTTCAGTACTTTGTGGAACTTTTTCGTGGGGCATAGACTCGGCATCGTCAGTGTCGAAGAGGCGCGCAAAGATTCTAGACTCCCACCTTGAATTT
CTTGCGAGTGCACTGGATGGAAAATTTTCAATTGGATGTGATTGGGCTACTTGGCGGGCTTATGTTTCTGGGTTTGTAAGCTTGATGGTGCGTTGTGCGCCGAGGTGGTT
GCTCGAGGTGGATTTGAACGTCTTGAAGAGTTTGAGCAAAGGATTAAGGCAGTTGAACGAGGAAGAGTTGGCTCTTGCATTGCTGGAAAGCGGTGGGGTGAATGCAATGG
GTGCAGCAGCTGAACTCATTATTGAAGGTGGATTTTAA

mRNA sequence

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Protein sequence

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MERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEEECSPSKTRDEKQSSGKCRKGLIMSLQMLGEYEGLLTPPQSVIAVANQAAAKAVMFISGVAVGNEYYD
CISMNDTPINCCKTLLTLCSKLFGSVIGIYSSAMVGWSSFMKGSSLTLSMVNALVATPASSLAEIEKIYEIAVNGSGDEKISAASVLCGASLVRGWNLQEHTVLFIARLL
SPPIPADYSGNDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGS
QLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPVFMDSFPKLKGWYRQHQECIASILPGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSA
SEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGGTSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPIIASLWAQKVKRWNDF
LVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPVAPGILYLRVHRSVRDALFMVEEIVSLLMLTVRDIAVSGLPKEKAEKLKK
TKYGMRYEQVSFASAMTRVKLAASLGAALVWISGGSGLVQSLFKETLPSWFLSVHSVEREGVGYGGMVAVLGGYALAFFSVLCGTFSWGIDSASSVSKRRAKILDSHLEF
LASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPRWLLEVDLNVLKSLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF

Tan0021839 (gene) of Snake gourd v1 genome