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Tan0021852 (gene) of Snake gourd v1 genome

Gene IDTan0021852
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:3645584..3646888
RNA-Seq ExpressionTan0021852
SyntenyTan0021852
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044640.1 hypothetical protein E6C27_scaffold46G003950 [Cucumis melo var. makuwa]6.5e-1673.56Show/hide
Query:  MASIVWKLFLIITLILA-SNVHARRFDSIPNIHRMKYEETN--NTSAPPPNTQNG-DGMKNE-ETNNT-SAAPPPAKNEDGVWNGNF
        MASI+WKLFLIITLILA SNVHAR   SI  IH MK  E N  NT A PP+TQN  DGMKN   TNNT  AAPPPAKNEDGVWNGNF
Subjt:  MASIVWKLFLIITLILA-SNVHARRFDSIPNIHRMKYEETN--NTSAPPPNTQNG-DGMKNE-ETNNT-SAAPPPAKNEDGVWNGNF
KGN53137.1 hypothetical protein Csa_015300 [Cucumis sativus]9.0e-1874.42Show/hide
Query:  MASIVWKLFLIITLILASN-VHARRFDSIPNIHRMKYEETN-NTSAPPPNTQNG-DGMKNE-ETNN-TSAAPPPAKNEDGVWNGNF
        MASI+WKLFLIITLILASN VHARR  S   IHRM+Y E N +T A PPNTQN  DGMKN  ETNN T+AAPPPAK+EDGVW+GNF
Subjt:  MASIVWKLFLIITLILASN-VHARRFDSIPNIHRMKYEETN-NTSAPPPNTQNG-DGMKNE-ETNN-TSAAPPPAKNEDGVWNGNF
TrEMBL top hitse value%identityAlignment
A0A0A0KXJ2 Uncharacterized protein4.4e-1874.42Show/hide
Query:  MASIVWKLFLIITLILASN-VHARRFDSIPNIHRMKYEETN-NTSAPPPNTQNG-DGMKNE-ETNN-TSAAPPPAKNEDGVWNGNF
        MASI+WKLFLIITLILASN VHARR  S   IHRM+Y E N +T A PPNTQN  DGMKN  ETNN T+AAPPPAK+EDGVW+GNF
Subjt:  MASIVWKLFLIITLILASN-VHARRFDSIPNIHRMKYEETN-NTSAPPPNTQNG-DGMKNE-ETNN-TSAAPPPAKNEDGVWNGNF
A0A5D3D0C9 Uncharacterized protein3.1e-1673.56Show/hide
Query:  MASIVWKLFLIITLILA-SNVHARRFDSIPNIHRMKYEETN--NTSAPPPNTQNG-DGMKNE-ETNNT-SAAPPPAKNEDGVWNGNF
        MASI+WKLFLIITLILA SNVHAR   SI  IH MK  E N  NT A PP+TQN  DGMKN   TNNT  AAPPPAKNEDGVWNGNF
Subjt:  MASIVWKLFLIITLILA-SNVHARRFDSIPNIHRMKYEETN--NTSAPPPNTQNG-DGMKNE-ETNNT-SAAPPPAKNEDGVWNGNF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATTGTTTGGAAACTCTTCTTGATCATCACACTCATATTAGCTTCCAATGTTCATGCAAGGAGATTCGATTCCATCCCCAATATTCATCGTATGAAGTATGA
AGAGACAAATAATACAAGTGCTCCACCACCTAATACCCAAAATGGAGATGGTATGAAGAATGAAGAGACAAATAATACAAGTGCAGCTCCTCCACCAGCCAAAAATGAAG
ATGGTGTTTGGAATGGGAACTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAATTGTTTGGAAACTCTTCTTGATCATCACACTCATATTAGCTTCCAATGTTCATGCAAGGAGATTCGATTCCATCCCCAATATTCATCGTATGAAGTATGA
AGAGACAAATAATACAAGTGCTCCACCACCTAATACCCAAAATGGAGATGGTATGAAGAATGAAGAGACAAATAATACAAGTGCAGCTCCTCCACCAGCCAAAAATGAAG
ATGGTGTTTGGAATGGGAACTTTTGA
Protein sequenceShow/hide protein sequence
MASIVWKLFLIITLILASNVHARRFDSIPNIHRMKYEETNNTSAPPPNTQNGDGMKNEETNNTSAAPPPAKNEDGVWNGNF