; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021879 (gene) of Snake gourd v1 genome

Gene IDTan0021879
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG09:59399265..59400427
RNA-Seq ExpressionTan0021879
SyntenyTan0021879
Gene Ontology termsNA
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588193.1 hypothetical protein SDJN03_16758, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4343.65Show/hide
Query:  KSCSSKSVGGHCLEEEE--CVEKGK-KLVKWKMPKVPTHKIFEERRKKLFTSFSSDPSIRTTEAKISFGKEGGAFKLYSENPSSYGDKGKYYYKMNIGFV
        +S  SKS   H L+ +E   VEKGK  L+ W +P +PT KI+   +  LFT FS +  ++T E        GG   L  E+   +  + K Y  ++IG V
Subjt:  KSCSSKSVGGHCLEEEE--CVEKGK-KLVKWKMPKVPTHKIFEERRKKLFTSFSSDPSIRTTEAKISFGKEGGAFKLYSENPSSYGDKGKYYYKMNIGFV

Query:  QIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTCYKLNPDN
        QIGVK LTR  P NA +++CLRD R   +QDSLLG+VE+NL+DGP Y NVFPNI  SLS+  L ++L ++  V+ F+QLP+G + IV+  R CYK+    
Subjt:  QIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTCYKLNPDN

Query:  FGPEALLESPV-GKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQVQLPCNWP
             LL++P  G+T+FFQT  +   ND +      Q VT+W++VQLP NWP
Subjt:  FGPEALLESPV-GKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQVQLPCNWP

KAG6590198.1 hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sororia]2.8e-9568.28Show/hide
Query:  MSYLFKSCSSKSVGGHCLEEEECVEKGKKLVKWKMPKVPTHKIFEERRKKLFTSFSS--DPSIRTTEAKISFGKEGGAFKLYSENPSSYGDKGKYYYKMN
        MS  F+SCSSK V  H LE+EE VEKG  LVKW MP VP HK++E + KK   +FS+  D SIR TE +ISFG  GG+FKLY + PSSYG KGK+Y  MN
Subjt:  MSYLFKSCSSKSVGGHCLEEEECVEKGKKLVKWKMPKVPTHKIFEERRKKLFTSFSS--DPSIRTTEAKISFGKEGGAFKLYSENPSSYGDKGKYYYKMN

Query:  IGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASL-TNVLSVHVLVKGFDQLPKGSEPIVLTCRTCYK
        IG VQIGVKT+TRKIPSNASII+C+RDNR+EK++DS++ +VES L DGPFY NVFPN+N SL  ASL  NVLSVHVLVKGFDQL KGSEPIV++CRTCYK
Subjt:  IGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASL-TNVLSVHVLVKGFDQLPKGSEPIVLTCRTCYK

Query:  LNPDNFGPEALLESPVGKTVFFQTKIDLDSN-DGDDDHNVVQKVTIWDQVQLPCNWPPHLQINRFPRV
        LN   FGPEALLESPVGKTVFFQT+I    N  G    +VVQKVT WDQVQLP NWPP L I +FP V
Subjt:  LNPDNFGPEALLESPVGKTVFFQTKIDLDSN-DGDDDHNVVQKVTIWDQVQLPCNWPPHLQINRFPRV

KGN66493.1 hypothetical protein Csa_007053 [Cucumis sativus]1.5e-9669.52Show/hide
Query:  MSYLFKSCSSKS-VGGHCLEEEECVEKGKKLVKWKMPKVPTHKIFEERRKKLFTSFSS--DPSIRTTEAKISFGKEGGAFKLYSENPSSYGDKGK--YYY
        MS  FKSCSSK+ VG H LEEEE VEKGK LVKWKMP+VP HKI+EERRK  F  F S  DPSIRTTE +ISFG EGG+FKLY + PSSY  + +  ++ 
Subjt:  MSYLFKSCSSKS-VGGHCLEEEECVEKGKKLVKWKMPKVPTHKIFEERRKKLFTSFSS--DPSIRTTEAKISFGKEGGAFKLYSENPSSYGDKGK--YYY

Query:  KMNIGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTC
         MNIG VQIGVKTLT+KIP NASII+CLRDNR+EK++DSLL LVES L DGPFY NVFPNINLSL  +S+TNVLSVHVLVKG D++PKGS PIV+TCRTC
Subjt:  KMNIGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTC

Query:  YKLNPDNFGPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQVQLPCNWPPHLQINRFPRV
        YKLN ++FG EAL+ESPVGKTVFFQ +I       DDD +VVQKVT+W+QVQLP +WPP L I   PR+
Subjt:  YKLNPDNFGPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQVQLPCNWPPHLQINRFPRV

KGN66494.1 hypothetical protein Csa_006902 [Cucumis sativus]1.7e-4746.5Show/hide
Query:  CSSKSVGG--HCLEEEECVEKGKKLVKWKMPKVPTHKIFEERRKKLFTSFSSDPSIRTTEAKISFGKEGGAFKLYSENP--SSYGDKGKYYYKMNIGFVQ
        C S + GG  H L+ EE ++KGK L+KWK+PK+PT KI++         F SDP I+T E  +        F+L S NP   ++ +K ++Y ++N+G +Q
Subjt:  CSSKSVGG--HCLEEEECVEKGKKLVKWKMPKVPTHKIFEERRKKLFTSFSSDPSIRTTEAKISFGKEGGAFKLYSENP--SSYGDKGKYYYKMNIGFVQ

Query:  IGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTCYKLNPDNF
        IGVKTLT KIPSNASII+C+ D R +  +DS+LGLVES L DGP + N+FPNI + +    L     +  +V+GF+QLP+G+ PI L  RTCYKL     
Subjt:  IGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTCYKLNPDNF

Query:  GPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQV
         P AL+ESP GKTVFFQT  + +S   D      QKV+ WD+V
Subjt:  GPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQV

XP_038880673.1 uncharacterized protein LOC120072292 [Benincasa hispida]4.7e-4244.8Show/hide
Query:  MSYLFKSCSSKSVGG--HCLEEEECVEKGKKLVKWKMPKVPTHKIFEERRKKLFTSFSSDPSIRTTEAKISFGKEGGAFKLYSENP--SSYGDKGKYYYK
        M+ LFK C S + GG  H L+ EE ++KG  L+KWK+PKVPT KI+   ++  FT F SDPSI+T E K+S      AF+L ++NP  +S+ D  ++Y  
Subjt:  MSYLFKSCSSKSVGG--HCLEEEECVEKGKKLVKWKMPKVPTHKIFEERRKKLFTSFSSDPSIRTTEAKISFGKEGGAFKLYSENP--SSYGDKGKYYYK

Query:  MNIGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTCY
        +N+G +QIGVK +T KIPSNASII+C+ D+R E  +D++LGLVESNL                                 GF+QLP+G+ PI L  RTCY
Subjt:  MNIGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTCY

Query:  KLNPDNFGPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQV
        KL  ++  P ALLESP GKTV+FQT       D  +    VQKV+ WD+V
Subjt:  KLNPDNFGPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQV

TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein7.2e-9769.52Show/hide
Query:  MSYLFKSCSSKS-VGGHCLEEEECVEKGKKLVKWKMPKVPTHKIFEERRKKLFTSFSS--DPSIRTTEAKISFGKEGGAFKLYSENPSSYGDKGK--YYY
        MS  FKSCSSK+ VG H LEEEE VEKGK LVKWKMP+VP HKI+EERRK  F  F S  DPSIRTTE +ISFG EGG+FKLY + PSSY  + +  ++ 
Subjt:  MSYLFKSCSSKS-VGGHCLEEEECVEKGKKLVKWKMPKVPTHKIFEERRKKLFTSFSS--DPSIRTTEAKISFGKEGGAFKLYSENPSSYGDKGK--YYY

Query:  KMNIGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTC
         MNIG VQIGVKTLT+KIP NASII+CLRDNR+EK++DSLL LVES L DGPFY NVFPNINLSL  +S+TNVLSVHVLVKG D++PKGS PIV+TCRTC
Subjt:  KMNIGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTC

Query:  YKLNPDNFGPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQVQLPCNWPPHLQINRFPRV
        YKLN ++FG EAL+ESPVGKTVFFQ +I       DDD +VVQKVT+W+QVQLP +WPP L I   PR+
Subjt:  YKLNPDNFGPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQVQLPCNWPPHLQINRFPRV

A0A0A0LZS0 Uncharacterized protein8.1e-4846.5Show/hide
Query:  CSSKSVGG--HCLEEEECVEKGKKLVKWKMPKVPTHKIFEERRKKLFTSFSSDPSIRTTEAKISFGKEGGAFKLYSENP--SSYGDKGKYYYKMNIGFVQ
        C S + GG  H L+ EE ++KGK L+KWK+PK+PT KI++         F SDP I+T E  +        F+L S NP   ++ +K ++Y ++N+G +Q
Subjt:  CSSKSVGG--HCLEEEECVEKGKKLVKWKMPKVPTHKIFEERRKKLFTSFSSDPSIRTTEAKISFGKEGGAFKLYSENP--SSYGDKGKYYYKMNIGFVQ

Query:  IGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTCYKLNPDNF
        IGVKTLT KIPSNASII+C+ D R +  +DS+LGLVES L DGP + N+FPNI + +    L     +  +V+GF+QLP+G+ PI L  RTCYKL     
Subjt:  IGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTCYKLNPDNF

Query:  GPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQV
         P AL+ESP GKTVFFQT  + +S   D      QKV+ WD+V
Subjt:  GPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQV

A0A5A7U9X3 Polyprotein7.1e-3650.29Show/hide
Query:  AFKLYSENP--SSYGDKGKYYYKMNIGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHV
        AF+L  +NP  +S+ +K ++   +N+G +QIGVKTLT KI SNASII+C+ D R +  +DS+LGLVE+ L DGP + N+FPNI +SL    L   L +  
Subjt:  AFKLYSENP--SSYGDKGKYYYKMNIGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHV

Query:  LVKGFDQLPKGSEPIVLTCRTCYKLNPDNFGPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQV
        +V+GF+QLP+G+ PI L  RTCYKL    F P AL+ESP GKTVFFQT       D ++    VQKV+ WD+V
Subjt:  LVKGFDQLPKGSEPIVLTCRTCYKLNPDNFGPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQV

A0A5D3D5V1 Polyprotein8.4e-3750.87Show/hide
Query:  AFKLYSENP--SSYGDKGKYYYKMNIGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHV
        AF+L  +NP  +S+ +K ++   +N+G +QIGVKTLT KIPSNASII+C+ D R +  +DS+LGLVE+ L DGP + N+FPNI +SL    L   L +  
Subjt:  AFKLYSENP--SSYGDKGKYYYKMNIGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHV

Query:  LVKGFDQLPKGSEPIVLTCRTCYKLNPDNFGPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQV
        +V+GF+QLP+G+ PI L  RTCYKL    F P AL+ESP GKTVFFQT       D ++    VQKV+ WD+V
Subjt:  LVKGFDQLPKGSEPIVLTCRTCYKLNPDNFGPEALLESPVGKTVFFQTKIDLDSNDGDDDHNVVQKVTIWDQV

A5ARA1 Uncharacterized protein1.3e-2431.82Show/hide
Query:  WKMPKVPTHKIFEERRKKLFTSFSSDPSIRTTEAKISFGKEGGAFKLYSENPSSYGDKGKYYYKMNIGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQ
        WK+PKV   +I+    KK+   F +D +I+T+E  ++  ++    +L  +N S    K   Y  ++ G +Q+  K LTR +  N SI++CLRDNR  + +
Subjt:  WKMPKVPTHKIFEERRKKLFTSFSSDPSIRTTEAKISFGKEGGAFKLYSENPSSYGDKGKYYYKMNIGFVQIGVKTLTRKIPSNASIIVCLRDNRVEKIQ

Query:  DSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTCYKLNPDNFGPEALLESPVGKTVFFQTKIDLDSNDGDD
        DS++G V++ L DGP Y   +PN  + +  A + + + +H+   GF  +  G+ P+ +  R  YK    + G  AL  SP G+T +F + + LD +D   
Subjt:  DSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTCYKLNPDNFGPEALLESPVGKTVFFQTKIDLDSNDGDD

Query:  DHNVVQKVTIWDQVQLPCNW
           ++ K  +W  V+ P NW
Subjt:  DHNVVQKVTIWDQVQLPCNW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATACCTTTTCAAGTCTTGTAGCTCAAAATCCGTTGGTGGGCATTGTTTAGAAGAAGAAGAATGTGTTGAAAAGGGAAAAAAATTAGTGAAATGGAAGATGCCAAA
AGTCCCAACTCACAAAATATTCGAAGAAAGAAGAAAAAAACTCTTCACTTCTTTTTCATCTGATCCTTCCATTAGAACCACCGAAGCCAAAATCAGCTTTGGAAAAGAAG
GAGGAGCTTTCAAATTGTATAGCGAAAACCCTTCTTCGTATGGTGACAAAGGAAAATATTACTACAAAATGAACATAGGGTTCGTTCAAATTGGAGTCAAAACCCTAACA
AGAAAAATACCCTCAAATGCTTCCATAATCGTGTGCCTTCGTGACAATAGAGTTGAAAAGATTCAAGATTCTCTTTTGGGATTGGTGGAATCCAATTTGAGAGATGGCCC
ATTTTACTTGAATGTTTTTCCAAACATAAACTTGTCTTTGAGTTCAGCTTCACTTACTAATGTTTTGAGTGTTCATGTTTTGGTCAAAGGGTTTGATCAGCTTCCAAAAG
GGTCGGAGCCAATTGTGTTGACATGTAGAACATGTTACAAGTTGAATCCAGACAACTTTGGACCAGAGGCCTTGCTTGAGAGTCCTGTTGGGAAAACTGTGTTTTTTCAG
ACAAAGATTGATCTCGACAGTAATGATGGTGATGATGATCATAATGTTGTTCAGAAGGTCACTATTTGGGACCAAGTTCAGTTGCCTTGTAATTGGCCTCCTCACTTGCA
GATAAATAGGTTTCCTAGAGTGACTATTGTTAATGGAGTTAGTTTTATTCCAACCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATTAATTTCTTGAAAGAATCACATTGCATCAAATATTTCCAAAGAGAGTTTCTTAGTATTTTGGTAACCTCTGAAGAAAGAAAAAAAAATGTCATACCTTTTCAAGTCTT
GTAGCTCAAAATCCGTTGGTGGGCATTGTTTAGAAGAAGAAGAATGTGTTGAAAAGGGAAAAAAATTAGTGAAATGGAAGATGCCAAAAGTCCCAACTCACAAAATATTC
GAAGAAAGAAGAAAAAAACTCTTCACTTCTTTTTCATCTGATCCTTCCATTAGAACCACCGAAGCCAAAATCAGCTTTGGAAAAGAAGGAGGAGCTTTCAAATTGTATAG
CGAAAACCCTTCTTCGTATGGTGACAAAGGAAAATATTACTACAAAATGAACATAGGGTTCGTTCAAATTGGAGTCAAAACCCTAACAAGAAAAATACCCTCAAATGCTT
CCATAATCGTGTGCCTTCGTGACAATAGAGTTGAAAAGATTCAAGATTCTCTTTTGGGATTGGTGGAATCCAATTTGAGAGATGGCCCATTTTACTTGAATGTTTTTCCA
AACATAAACTTGTCTTTGAGTTCAGCTTCACTTACTAATGTTTTGAGTGTTCATGTTTTGGTCAAAGGGTTTGATCAGCTTCCAAAAGGGTCGGAGCCAATTGTGTTGAC
ATGTAGAACATGTTACAAGTTGAATCCAGACAACTTTGGACCAGAGGCCTTGCTTGAGAGTCCTGTTGGGAAAACTGTGTTTTTTCAGACAAAGATTGATCTCGACAGTA
ATGATGGTGATGATGATCATAATGTTGTTCAGAAGGTCACTATTTGGGACCAAGTTCAGTTGCCTTGTAATTGGCCTCCTCACTTGCAGATAAATAGGTTTCCTAGAGTG
ACTATTGTTAATGGAGTTAGTTTTATTCCAACCTATTGAATATCCTATTTGTAAATGAGGAAATTAATGTTTTGTTTTTCTTTTAATCATGTAAGGAAATAAGTATTTGG
GTAAATTTTATATGTTGTGTGTGTGTTTGAAGTCCATAATGTGATTTAGGATGGATGTTTTTGCCTATTGTGTAAGCCAATTTTGGAAAATGTGTATAATAATGTATTTG
AATTGATGTACTTTTATGTGTTCTTTATATAAATTAATAAAATGTACAAGTGGTTACTCTTGA
Protein sequenceShow/hide protein sequence
MSYLFKSCSSKSVGGHCLEEEECVEKGKKLVKWKMPKVPTHKIFEERRKKLFTSFSSDPSIRTTEAKISFGKEGGAFKLYSENPSSYGDKGKYYYKMNIGFVQIGVKTLT
RKIPSNASIIVCLRDNRVEKIQDSLLGLVESNLRDGPFYLNVFPNINLSLSSASLTNVLSVHVLVKGFDQLPKGSEPIVLTCRTCYKLNPDNFGPEALLESPVGKTVFFQ
TKIDLDSNDGDDDHNVVQKVTIWDQVQLPCNWPPHLQINRFPRVTIVNGVSFIPTY