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Tan0021887 (gene) of Snake gourd v1 genome

Gene IDTan0021887
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:10618682..10619385
RNA-Seq ExpressionTan0021887
SyntenyTan0021887
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015140.1 hypothetical protein SDJN02_22773, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-4784.56Show/hide
Query:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQ--SASPPEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQEAN
        MI NLISSLNKKLQAVEISNRC+RTKKTT  VYR D+SKKKQ Q  S   PEI+KVKKRVRFA+TEPVIIAID EERS  EETEKKVVRITVKLTKQEAN
Subjt:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQ--SASPPEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQEAN

Query:  RMLSRCSDGGVLEFGDVACELMRIPAARVSSSMVAD
        RMLSRCSDGGVLEF DVA ELMRIPAARVSSSMV +
Subjt:  RMLSRCSDGGVLEFGDVACELMRIPAARVSSSMVAD

XP_022931429.1 uncharacterized protein LOC111437608 [Cucurbita moschata]1.1e-4786.47Show/hide
Query:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQ--SASPPEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQEAN
        MI NLISSLNKKLQAVEISNRC+RTKKTT  VYR D+SKKKQ Q  S   PEI+KVKKRVRFA+TEPVIIAID EERS  EETEKKVVRITVKLTKQEAN
Subjt:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQ--SASPPEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQEAN

Query:  RMLSRCSDGGVLEFGDVACELMRIPAARVSSSM
        RMLSRCSDGGVLEFGDVA ELMRIPAARVSSSM
Subjt:  RMLSRCSDGGVLEFGDVACELMRIPAARVSSSM

XP_022985430.1 uncharacterized protein LOC111483436 [Cucurbita maxima]9.6e-4986.67Show/hide
Query:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQSASP----PEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQE
        MI NLISSLNKKLQAVEISNRC+RTKKTT  VYR D+SKKKQ QS SP    PEI+KVKKRVRFA+TEPVIIAID EERS  EETEKKVVRITVKLTKQE
Subjt:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQSASP----PEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQE

Query:  ANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSM
        ANRMLSRCSDGGVLEFGDVA ELMRIPAARVSSSM
Subjt:  ANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSM

XP_023522331.1 uncharacterized protein LOC111786247 [Cucurbita pepo subsp. pepo]4.0e-4785.71Show/hide
Query:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQ--SASPPEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQEAN
        MI NLISSLNKKLQAVEISNRC+RTKKTT  VYR D+SKKKQ Q  S   PEI+KVKKRVRFA+TEPVIIAID EERS  EETEKKVVRITVKLTKQEAN
Subjt:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQ--SASPPEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQEAN

Query:  RMLSRCSDGGVLEFGDVACELMRIPAARVSSSM
        RMLSRCS+GGVLEFGDVA ELMRIPAARVSSSM
Subjt:  RMLSRCSDGGVLEFGDVACELMRIPAARVSSSM

XP_038906331.1 uncharacterized protein LOC120092170 [Benincasa hispida]5.6e-4985.61Show/hide
Query:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQ----SQSASPPEIKKVKKRVRFAETEPVIIAI-DGEERSAGEETEKKVVRITVKLTKQ
        MISN I SLNKKLQAVEISNRC+RTKK TTYVYRDDLSKKKQ    S S   PEIKKVKKRVRFA+TEPVIIAI D EERS  EETEKKVVRITVKLTK+
Subjt:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQ----SQSASPPEIKKVKKRVRFAETEPVIIAI-DGEERSAGEETEKKVVRITVKLTKQ

Query:  EANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSMVAD
        EANRMLSRCSDGGVLEFGDVACELMRIPA RVSSSMVA+
Subjt:  EANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSMVAD

TrEMBL top hitse value%identityAlignment
A0A0A0KYE1 Uncharacterized protein2.5e-4276.22Show/hide
Query:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQSAS-------PPEIKKVKKRVRFAETEPVIIAI--DGEERSAGEETEKKVVRITVK
        MISNLISSLNKKLQAVEIS+RCKRTKK T YVYRD+L+KK  S  +S       P EIKKVKKRVRFA+TEPVIIAI  D EE     ETEKKVVRITVK
Subjt:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQSAS-------PPEIKKVKKRVRFAETEPVIIAI--DGEERSAGEETEKKVVRITVK

Query:  LTKQEANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSMVAD
        LTKQEANRMLSRCS+GGVLEFGDVA ELMRIP  RV SS+VA+
Subjt:  LTKQEANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSMVAD

A0A1S3BS40 uncharacterized protein LOC1034930981.5e-4478.01Show/hide
Query:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQSAS-------PPEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLT
        MISNLISSLNKKLQAVEISNRCKRTKK TTYVYRDDL+KKK S   S       P EIKKVKKRVRFA+TEPVIIAI  +     EETEKKVVRITVKLT
Subjt:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQSAS-------PPEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLT

Query:  KQEANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSMVAD
        KQEANRMLSRCS+ GVLEFGDVA EL+RIP  RVSSS+VA+
Subjt:  KQEANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSMVAD

A0A5D3D246 Uncharacterized protein1.5e-4478.01Show/hide
Query:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQSAS-------PPEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLT
        MISNLISSLNKKLQAVEISNRCKRTKK TTYVYRDDL+KKK S   S       P EIKKVKKRVRFA+TEPVIIAI  +     EETEKKVVRITVKLT
Subjt:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQSAS-------PPEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLT

Query:  KQEANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSMVAD
        KQEANRMLSRCS+ GVLEFGDVA EL+RIP  RVSSS+VA+
Subjt:  KQEANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSMVAD

A0A6J1EU86 uncharacterized protein LOC1114376085.1e-4886.47Show/hide
Query:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQ--SASPPEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQEAN
        MI NLISSLNKKLQAVEISNRC+RTKKTT  VYR D+SKKKQ Q  S   PEI+KVKKRVRFA+TEPVIIAID EERS  EETEKKVVRITVKLTKQEAN
Subjt:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQ--SASPPEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQEAN

Query:  RMLSRCSDGGVLEFGDVACELMRIPAARVSSSM
        RMLSRCSDGGVLEFGDVA ELMRIPAARVSSSM
Subjt:  RMLSRCSDGGVLEFGDVACELMRIPAARVSSSM

A0A6J1JBA8 uncharacterized protein LOC1114834364.6e-4986.67Show/hide
Query:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQSASP----PEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQE
        MI NLISSLNKKLQAVEISNRC+RTKKTT  VYR D+SKKKQ QS SP    PEI+KVKKRVRFA+TEPVIIAID EERS  EETEKKVVRITVKLTKQE
Subjt:  MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQSASP----PEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQE

Query:  ANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSM
        ANRMLSRCSDGGVLEFGDVA ELMRIPAARVSSSM
Subjt:  ANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23880.1 unknown protein5.9e-0430.23Show/hide
Query:  EIKKVKKRVRF---AETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSMV
        +I + KK V F    E +P    ++ +E     E +++VVR+ +K+TK EA R+LS+C +  VL+   +  ++  +P  ++  +MV
Subjt:  EIKKVKKRVRF---AETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFGDVACELMRIPAARVSSSMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGCAACTTAATTTCAAGCTTGAACAAAAAATTGCAGGCGGTTGAAATCAGCAATCGCTGCAAACGAACGAAGAAGACGACGACGTACGTTTACAGAGACGATCT
GAGCAAGAAGAAGCAGTCGCAGTCGGCGTCGCCGCCGGAGATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCAGAGACGGAGCCGGTGATAATCGCCATTGACGGAGAGG
AGCGAAGTGCAGGGGAGGAAACAGAGAAGAAAGTGGTGAGAATTACGGTGAAATTGACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGATGGCGGCGTTCTG
GAATTCGGAGATGTGGCTTGTGAGCTCATGCGAATTCCTGCGGCTCGAGTTAGCTCTTCTATGGTGGCTGATTGA
mRNA sequenceShow/hide mRNA sequence
CCTTTCTTCCTCACAGGCTCCCTCTCTCATCTCTCTCTAACTTTATCTCCTTCTCTCTCTATCAGATCTGAAAAATCATGATCAGCAACTTAATTTCAAGCTTGAACAAA
AAATTGCAGGCGGTTGAAATCAGCAATCGCTGCAAACGAACGAAGAAGACGACGACGTACGTTTACAGAGACGATCTGAGCAAGAAGAAGCAGTCGCAGTCGGCGTCGCC
GCCGGAGATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCAGAGACGGAGCCGGTGATAATCGCCATTGACGGAGAGGAGCGAAGTGCAGGGGAGGAAACAGAGAAGAAAG
TGGTGAGAATTACGGTGAAATTGACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGATGGCGGCGTTCTGGAATTCGGAGATGTGGCTTGTGAGCTCATGCGA
ATTCCTGCGGCTCGAGTTAGCTCTTCTATGGTGGCTGATTGAATTTTTCCCCTTTTCTTCTCTTCTTCGAGAAGTTCTTACGGCTTCTGAGATTATATTCATAATCTTTG
CAGTTTTTTTTCGTTTATTTTTTGGGGGATTATTAAATTATATCTTTAATTGGTGTAATTAGGATTTAGAGTGTTGTAAATTATATTATTATATAGTGTCAAATTTTTGT
ATTAATGATCAAGTTTTGAGAAATGGCTCGGTTTTGATAACTCA
Protein sequenceShow/hide protein sequence
MISNLISSLNKKLQAVEISNRCKRTKKTTTYVYRDDLSKKKQSQSASPPEIKKVKKRVRFAETEPVIIAIDGEERSAGEETEKKVVRITVKLTKQEANRMLSRCSDGGVL
EFGDVACELMRIPAARVSSSMVAD