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Tan0021899 (gene) of Snake gourd v1 genome

Gene IDTan0021899
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 10
Genome locationLG09:42788388..42788603
RNA-Seq ExpressionTan0021899
SyntenyTan0021899
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637268.1 hypothetical protein CSA_017684 [Cucumis sativus]4.8e-0750.72Show/hide
Query:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLG
        +SWLIC+V ISMLV  Q+V A   +LK  + C+ P+PPPSCSS   +       N Y RGCS I+RC G
Subjt:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLG
KAE8651825.1 hypothetical protein Csa_006496, partial [Cucumis sativus]4.8e-0753.03Show/hide
Query:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINR
        +SWLICL LI MLV GQ+VAA+  YLK +D CNQP+PPP+C  PN +      AN Y RG   + +
Subjt:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINR
XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]2.1e-1058.57Show/hide
Query:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLGG
        +SWLICLVLI MLV  Q VA++  +LK  D C QPNPPP CS  N      V AN Y RGCS I RC GG
Subjt:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLGG
XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]1.0e-0957.14Show/hide
Query:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLGG
        +SWLIC+VLISMLV  Q+VA++  +LK  D C QPNPP  CS  N      V AN Y RGCS I RC GG
Subjt:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLGG
XP_038877580.1 protein RALF-like 11 [Benincasa hispida]2.9e-1260Show/hide
Query:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLGG
        +SWLIC+V ISMLV G  VAA++ YL+ +D CNQPNPPP+CS    E    V AN Y RGCS I+RC GG
Subjt:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLGG
TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein3.5e-1158.57Show/hide
Query:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLGG
        +SWLICL LI MLV GQ+VAA+  +LK +D CNQP+PPP+C  PN +      AN Y R CS INRC GG
Subjt:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLGG
A0A0A0M0X3 Uncharacterized protein2.3e-0750.72Show/hide
Query:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLG
        +SWLIC+V ISMLV  Q+V A   +LK  + C+ P+PPPSCSS   +       N Y RGCS I+RC G
Subjt:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLG
A0A1S4DY33 protein RALF-like 301.2e-0651.43Show/hide
Query:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLGG
        +SWLIC  L+SMLV G +VAA   +LK +D C QP+PP SC   +    +P+   AY RGCS I RC GG
Subjt:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLGG
A0A6J1G7J2 protein RALF-like 101.0e-1058.57Show/hide
Query:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLGG
        +SWLICLVLI MLV  Q VA++  +LK  D C QPNPPP CS  N      V AN Y RGCS I RC GG
Subjt:  QSWLICLVLISMLVTGQKVAADRTYLKLVD-CNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLGG
D7L1Y4 Uncharacterized protein4.4e-0643.48Show/hide
Query:  QSWLICLVLISMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRC
        ++W+ICL++IS  VT + V + R Y++   +  C  PNPPP C  P  E   P   N Y+RGCS I+RC
Subjt:  QSWLICLVLISMLVTGQKVAADRTYLK---LVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRC
SwissProt top hitse value%identityAlignment
Q9LSG0 Protein RALF-like 253.8e-0747.14Show/hide
Query:  MKQSWLICLVLISMLVTGQKVAAD--RTYLKLVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRC
        MK   +I LV+ S+L+ G+  A D  R YL L  C +PN PP C     +  TPV  N Y+RGC+TINRC
Subjt:  MKQSWLICLVLISMLVTGQKVAAD--RTYLKLVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRC
Arabidopsis top hitse value%identityAlignment
AT3G25165.1 ralf-like 252.7e-0847.14Show/hide
Query:  MKQSWLICLVLISMLVTGQKVAAD--RTYLKLVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRC
        MK   +I LV+ S+L+ G+  A D  R YL L  C +PN PP C     +  TPV  N Y+RGC+TINRC
Subjt:  MKQSWLICLVLISMLVTGQKVAAD--RTYLKLVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAGTCATGGCTCATTTGTTTAGTTCTAATTAGCATGTTGGTGACAGGACAAAAAGTAGCAGCGGACAGAACTTATCTTAAACTAGTGGATTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAAAGTTCTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTACCATCAATCGTTGTCTTGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAGTCATGGCTCATTTGTTTAGTTCTAATTAGCATGTTGGTGACAGGACAAAAAGTAGCAGCGGACAGAACTTATCTTAAACTAGTGGATTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAAAGTTCTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTACCATCAATCGTTGTCTTGGAGGATGA
Protein sequenceShow/hide protein sequence
MKQSWLICLVLISMLVTGQKVAADRTYLKLVDCNQPNPPPSCSSPNGESSTPVSANAYTRGCSTINRCLGG