; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021937 (gene) of Snake gourd v1 genome

Gene IDTan0021937
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionkinetochore protein SPC24 homolog
Genome locationLG03:63583961..63585278
RNA-Seq ExpressionTan0021937
SyntenyTan0021937
Gene Ontology termsGO:0051983 - regulation of chromosome segregation (biological process)
InterPro domainsIPR013252 - Kinetochore-Ndc80 subunit Spc24
IPR044951 - Kinetochore protein SPC24-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603567.1 Kinetochore protein SPC24-like protein, partial [Cucurbita argyrosperma subsp. sororia]9.7e-4183.5Show/hide
Query:  MMHLFFINTLVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMI
        MMHL F+NT++T+EIN+LD+ RISVQERKQA+KKLEQQELR QRKLSMYASVTDIIPNMD+QSKISGHIVDRNKRVVQ+FE DPT +S+FDICN IWNMI
Subjt:  MMHLFFINTLVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMI

Query:  NSP
        NSP
Subjt:  NSP

XP_022144075.1 uncharacterized protein LOC111013852 isoform X2 [Momordica charantia]4.5e-3891.49Show/hide
Query:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP
        LVT+EINELD  RISVQERKQA+KKLEQQELRAQRKLSMYASVTDIIPNMD+QSKISGHIVDRNKRVVQKFELDPTK SAFDICN IW+MINSP
Subjt:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP

XP_022931907.1 uncharacterized protein LOC111438184 [Cucurbita moschata]1.2e-3890.43Show/hide
Query:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP
        LV+N+INELD+ RISVQE+KQA KKLEQQELRAQRKLSMYASVTDIIPNMD+ SKISGHIVDRNKRVVQKFELDPTKMS+FDICNDIWNMINSP
Subjt:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP

XP_022966574.1 uncharacterized protein LOC111466216 [Cucurbita maxima]9.0e-3991.49Show/hide
Query:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP
        LVTN+INELD+ RISVQERKQA KKLEQQELRAQRKLSMYASVTDIIPNMD+ SKISGHIVDRNKRVVQKFELDPTK S+FDICNDIWNMINSP
Subjt:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP

XP_023518318.1 uncharacterized protein LOC111781837 [Cucurbita pepo subsp. pepo]1.8e-3992.55Show/hide
Query:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP
        LVTN+INELD+ RISVQERKQA KKLEQQELRAQRKLSMYASVTDIIPNMD+ SKISGHIVDRNKRVVQKFELDPTKMS+FDICNDIWNMINSP
Subjt:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP

TrEMBL top hitse value%identityAlignment
A0A0A0KXM7 Uncharacterized protein3.7e-3882.35Show/hide
Query:  MHLFFINTLVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMIN
        M L F NTLVTNEINEL+  R+SVQERKQA+KKLEQQEL AQRKLSMYASVTDIIPNM++QSKISGHIVDRNKRVVQKFE DP K+S+FD CN +WNMIN
Subjt:  MHLFFINTLVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMIN

Query:  SP
        SP
Subjt:  SP

A0A6J1CQL9 uncharacterized protein LOC111013852 isoform X22.2e-3891.49Show/hide
Query:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP
        LVT+EINELD  RISVQERKQA+KKLEQQELRAQRKLSMYASVTDIIPNMD+QSKISGHIVDRNKRVVQKFELDPTK SAFDICN IW+MINSP
Subjt:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP

A0A6J1CR83 uncharacterized protein LOC111013852 isoform X12.2e-3891.49Show/hide
Query:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP
        LVT+EINELD  RISVQERKQA+KKLEQQELRAQRKLSMYASVTDIIPNMD+QSKISGHIVDRNKRVVQKFELDPTK SAFDICN IW+MINSP
Subjt:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP

A0A6J1F034 uncharacterized protein LOC1114381845.7e-3990.43Show/hide
Query:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP
        LV+N+INELD+ RISVQE+KQA KKLEQQELRAQRKLSMYASVTDIIPNMD+ SKISGHIVDRNKRVVQKFELDPTKMS+FDICNDIWNMINSP
Subjt:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP

A0A6J1HU69 uncharacterized protein LOC1114662164.4e-3991.49Show/hide
Query:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP
        LVTN+INELD+ RISVQERKQA KKLEQQELRAQRKLSMYASVTDIIPNMD+ SKISGHIVDRNKRVVQKFELDPTK S+FDICNDIWNMINSP
Subjt:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP

SwissProt top hitse value%identityAlignment
Q67XT3 Kinetochore protein SPC24 homolog8.8e-2148.91Show/hide
Query:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMIN
        LV +E+ +L+    S+ E KQ+ K+  + +LRA++KLSMYASVT++IP++D+ SKISG++VDR KR+++KF+ +  KM+A++ CN IW++IN
Subjt:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMIN

Arabidopsis top hitse value%identityAlignment
AT3G08880.1 unknown protein6.3e-2248.91Show/hide
Query:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMIN
        LV +E+ +L+    S+ E KQ+ K+  + +LRA++KLSMYASVT++IP++D+ SKISG++VDR KR+++KF+ +  KM+A++ CN IW++IN
Subjt:  LVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMIN

AT5G01570.1 unknown protein1.7e-1145.07Show/hide
Query:  QERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTK-MSAFDICND
        +E + A+K+ ++ +LR + KL MYASVT +IPN+D+  K SG++V R+KR++ KFE D  K  S ++ CN+
Subjt:  QERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTK-MSAFDICND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCACCTGTTTTTCATCAACACGCTTGTTACCAATGAGATTAATGAACTAGACCAACATAGGATTTCTGTTCAAGAAAGGAAGCAGGCTTTGAAGAAACTTGAGCA
ACAAGAACTTAGGGCGCAGAGGAAGCTTTCGATGTATGCTTCGGTCACTGATATCATCCCAAACATGGACAATCAGTCTAAGATTTCTGGCCATATCGTGGATAGAAATA
AACGGGTTGTGCAGAAGTTTGAATTGGATCCGACTAAGATGTCTGCTTTTGATATATGCAATGACATTTGGAATATGATTAATTCTCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGCACCTGTTTTTCATCAACACGCTTGTTACCAATGAGATTAATGAACTAGACCAACATAGGATTTCTGTTCAAGAAAGGAAGCAGGCTTTGAAGAAACTTGAGCA
ACAAGAACTTAGGGCGCAGAGGAAGCTTTCGATGTATGCTTCGGTCACTGATATCATCCCAAACATGGACAATCAGTCTAAGATTTCTGGCCATATCGTGGATAGAAATA
AACGGGTTGTGCAGAAGTTTGAATTGGATCCGACTAAGATGTCTGCTTTTGATATATGCAATGACATTTGGAATATGATTAATTCTCCATAG
Protein sequenceShow/hide protein sequence
MMHLFFINTLVTNEINELDQHRISVQERKQALKKLEQQELRAQRKLSMYASVTDIIPNMDNQSKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNMINSP