CuGenDBv2

Gene ID	Tan0021955
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Genome location	LG02:75795368..75795970
RNA-Seq Expression	Tan0021955
Synteny	Tan0021955
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008234 - cysteine-type peptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]

4.1e-72

67.5

Show/hide

Query:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN
        M+S  + +L +++L G NY +WK  +NT+L++DDL FVL E+CP VPA N  ++V++ Y+RW KAN+K + YILAS+SEVLAK HE M++AREIM SLQ 
Subjt:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN

Query:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG
        MFGQ S Q++H++LKY+YN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESLP+SFLQF +NAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG

KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]

4.1e-72

67.5

Show/hide

Query:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN
        M+S  + +L +++L G NY +WK  +NT+L++DDL FVL E+CP VPA N  ++V++ Y+RW KAN+K + YILAS+SEVLAK HE M++AREIM SLQ 
Subjt:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN

Query:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG
        MFGQ S Q++H++LKY+YN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESLP+SFLQF +NAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]

4.1e-72

67.5

Show/hide

Query:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN
        M+S  + +L +++L G NY +WK  +NT+L++DDL FVL E+CP VPA N  ++V++ Y+RW KAN+K + YILAS+SEVLAK HE M++AREIM SLQ 
Subjt:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN

Query:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG
        MFGQ S Q++H++LKY+YN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESLP+SFLQF +NAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG

KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]

1.9e-72

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Query:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN
        M+S  + +L +++L G NY  WK  +NT+L++DDL FVL E+CP VPA N  Q+V++ Y+RW KAN+K + YILAS+SEVLAK HE M++AREIM SLQ 
Subjt:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN

Query:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG
        MFGQ S Q++H++LKY+YN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESLP+SFLQF +NAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]

4.1e-72

67.5

Show/hide

Query:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN
        M+S  + +L +++L G NY +WK  +NT+L++DDL FVL E+CP VPA N  ++V++ Y+RW KAN+K + YILAS+SEVLAK HE M++AREIM SLQ 
Subjt:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN

Query:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG
        MFGQ S Q++H++LKY+YN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESLP+SFLQF +NAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SMH8 Gag/pol protein

2.0e-72

67.5

Show/hide

Query:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN
        M+S  + +L +++L G NY +WK  +NT+L++DDL FVL E+CP VPA N  ++V++ Y+RW KAN+K + YILAS+SEVLAK HE M++AREIM SLQ 
Subjt:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN

Query:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG
        MFGQ S Q++H++LKY+YN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESLP+SFLQF +NAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG

A0A5A7TU93 Gag/pol protein

2.0e-72

67.5

Show/hide

Query:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN
        M+S  + +L +++L G NY +WK  +NT+L++DDL FVL E+CP VPA N  ++V++ Y+RW KAN+K + YILAS+SEVLAK HE M++AREIM SLQ 
Subjt:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN

Query:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG
        MFGQ S Q++H++LKY+YN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESLP+SFLQF +NAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG

A0A5A7TWB9 Gag/pol protein

2.0e-72

67.5

Show/hide

Query:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN
        M+S  + +L +++L G NY +WK  +NT+L++DDL FVL E+CP VPA N  ++V++ Y+RW KAN+K + YILAS+SEVLAK HE M++AREIM SLQ 
Subjt:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN

Query:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG
        MFGQ S Q++H++LKY+YN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESLP+SFLQF +NAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG

A0A5A7V6N0 Gag/pol protein

9.0e-73

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Query:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN
        M+S  + +L +++L G NY  WK  +NT+L++DDL FVL E+CP VPA N  Q+V++ Y+RW KAN+K + YILAS+SEVLAK HE M++AREIM SLQ 
Subjt:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN

Query:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG
        MFGQ S Q++H++LKY+YN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESLP+SFLQF +NAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG

A0A5D3CPJ6 Gag/pol protein

2.0e-72

67.5

Show/hide

Query:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN
        M+S  + +L +++L G NY +WK  +NT+L++DDL FVL E+CP VPA N  ++V++ Y+RW KAN+K + YILAS+SEVLAK HE M++AREIM SLQ 
Subjt:  MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQN

Query:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG
        MFGQ S Q++H++LKY+YN+RM EG+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESLP+SFLQF +NAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTCGTCCCCAATTATAGCCTTACTGAAAAGCGAACGTTTAACTGGTGAAAACTATACTACATGGAAGTACAACCTGAATACGATTCTTGTTGTTGACGACCTTTGGTT
TGTACTGACTGAGAAATGTCCTCATGTCCCTGCTCGAAACACTCCTCAATCTGTTAAGAAGACGTACGACCGCTGGATCAAGGCCAATGATAAGACCAAGGTCTACATTT
TGGCTAGTGTTTCTGAAGTTTTAGCCAAAAACCACGAGGGCATGGTCTCAGCTCGTGAGATCATGAGTTCGTTGCAGAACATGTTTGGACAACCATCTGGACAGCTTCGA
CACGAATCCCTCAAGTACGTTTATAACTCCCGTATGAAGGAGGGGTCGTCGGTGAGAGAACACGTTCTCGATCTGATGGTCCACTTCAACGTGGCTGAAATGAACGGCGC
TGTCATTGACGAGCAAAGTCAGGTCTCCTTCATCCTGGAATCTCTTCCGAAGAGTTTCCTGCAATTCCACAACAATGCGGTGATGAACAAGATAGAGTATGACCTGACTA
CTCTCCTTAATGAACTACAAACTTTCCAATCTCTTATGAAGAATAAGGGATAG

mRNA sequence

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Protein sequence

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MSSPIIALLKSERLTGENYTTWKYNLNTILVVDDLWFVLTEKCPHVPARNTPQSVKKTYDRWIKANDKTKVYILASVSEVLAKNHEGMVSAREIMSSLQNMFGQPSGQLR
HESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLPKSFLQFHNNAVMNKIEYDLTTLLNELQTFQSLMKNKG

Tan0021955 (gene) of Snake gourd v1 genome