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Tan0021963 (gene) of Snake gourd v1 genome

Gene IDTan0021963
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Genome locationLG05:70386547..70390385
RNA-Seq ExpressionTan0021963
SyntenyTan0021963
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006406 - mRNA export from nucleus (biological process)
GO:0043248 - proteasome assembly (biological process)
GO:0008541 - proteasome regulatory particle, lid subcomplex (cellular component)
InterPro domainsIPR007834 - DSS1/SEM1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573049.1 Protein DELETION OF SUV3 SUPPRESSOR 1(I), partial [Cucurbita argyrosperma subsp. sororia]5.1e-2897.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELES  EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

XP_004152470.1 protein DELETION OF SUV3 SUPPRESSOR 1(I) [Cucumis sativus]1.3e-2897.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

XP_022923645.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata]1.3e-2897.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

XP_022954951.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata]5.1e-2897.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELES  EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

XP_038893721.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Benincasa hispida]6.0e-2997.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MATESKTATEEVK+DLFEDDDEFEEFEINEEWEVKEEGKE+TQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

TrEMBL top hitse value%identityAlignment
A0A0A0LU33 Uncharacterized protein6.5e-2997.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

A0A1S3AW15 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like6.5e-2997.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

A0A5A7UJ57 Putative 26S proteasome complex subunit sem1-16.5e-2997.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

A0A6J1ECF8 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like6.5e-2997.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

A0A6J1KGG4 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like6.5e-2997.26Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

SwissProt top hitse value%identityAlignment
P60896 26S proteasome complex subunit SEM12.2e-0550.79Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEK
        + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +  K
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEK

P60897 26S proteasome complex subunit SEM12.2e-0550.79Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEK
        + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +  K
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEK

Q3ZBR6 26S proteasome complex subunit SEM12.2e-0550.79Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEK
        + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +  K
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEK

Q9FL96 Protein DSS1 HOMOLOG ON CHROMOSOME V4.8e-2172.6Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS QL++ELE+ +EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

Q9XIR8 Protein DELETION OF SUV3 SUPPRESSOR 1(I)1.3e-2175.68Show/hide
Query:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+  +KK
Subjt:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

Arabidopsis top hitse value%identityAlignment
AT1G64750.1 deletion of SUV3 suppressor 1(I)9.0e-2375.68Show/hide
Query:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+  +KK
Subjt:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

AT1G64750.2 deletion of SUV3 suppressor 1(I)9.0e-2375.68Show/hide
Query:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+  +KK
Subjt:  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK

AT1G64750.3 deletion of SUV3 suppressor 1(I)9.6e-1748.7Show/hide
Query:  MATESKTATEE-VKIDLFEDDDEFEEFEINE-----------------------------------------EWEVKEEGKEITQQWEDDWDDDDVNDDF
        MA E K AT E VK+DLFEDDDEFEEFEINE                                         +W  KEE KE++QQWEDDWDDDDVNDDF
Subjt:  MATESKTATEE-VKIDLFEDDDEFEEFEINE-----------------------------------------EWEVKEEGKEITQQWEDDWDDDDVNDDF

Query:  SLQLRRELESNAEKK
        S QLR+ELE+  +KK
Subjt:  SLQLRRELESNAEKK

AT5G45010.1 DSS1 homolog on chromosome V3.4e-2272.6Show/hide
Query:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK
        MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS QL++ELE+ +EKK
Subjt:  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGAATCCAAAACTGCGACTGAGGAAGTTAAGATTGACCTCTTTGAAGACGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAAGAAGA
AGGGAAAGAAATTACACAACAGTGGGAAGATGACTGGGATGACGATGATGTCAACGACGACTTCTCGTTGCAGCTTAGGAGAGAATTGGAGAGCAATGCCGAGAAGAAAT
GA
mRNA sequenceShow/hide mRNA sequence
AAAAAAATTAAAAAAGCAAGTGAAAATTTCTAGACTCGAACACAAGAACGCAACGCAGCGTCAGTGCTTTGACCTGATAATTAGGGCAAAGTATCCATTTGCTCCAAACA
GCAAAATTCTTCCACTAGCTTTCTGTCTCTCATCTACGTCCTAGTAGAACGAAGATAGTTCAAACTTTGTGATGGCGACTGAATCCAAAACTGCGACTGAGGAAGTTAAG
ATTGACCTCTTTGAAGACGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAAGAAGAAGGGAAAGAAATTACACAACAGTGGGAAGATGACTGGGA
TGACGATGATGTCAACGACGACTTCTCGTTGCAGCTTAGGAGAGAATTGGAGAGCAATGCCGAGAAGAAATGAGAAGAATTTATGTCCTTGTATGTTTTCATAAGATCTA
TGTTTTAACTAGGTCAAGACCCCAATGTGGTTTTATGTTCTATCCTTGTACATGATGGTATTACGAACATGCTTAAAAGTCTAAAACACTGTTACCTTCTCAGATTAGAA
ATTTGAAAAATTTAGACCTTTGGCACTGAAGAAAACAACATTTTTTGTTGTCACAGACCACGATGTTCGTTCACGAATCTTGCTATGATTTTCTTGAGATTTTATGATAT
GTTTCGTCTAAAATGTTGGCCGAAATTGAAAATAGTGTTTGTATTATGTGGTGGCAG
Protein sequenceShow/hide protein sequence
MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNAEKK