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Tan0021966 (gene) of Snake gourd v1 genome

Gene IDTan0021966
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 9
Genome locationLG01:72123980..72124348
RNA-Seq ExpressionTan0021966
SyntenyTan0021966
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650705.1 hypothetical protein Csa_010421 [Cucumis sativus]2.8e-1554.22Show/hide
Query:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEK
        M + K  T +F+GIL V  D I ITNA  +I+YG +  GD+SPGCS  HPELC     NPYQRGC+ IDRCR G+++ID +E+
Subjt:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEK

XP_022136918.1 uncharacterized protein LOC111008495 [Momordica charantia]1.3e-1548.46Show/hide
Query:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEK--------IDDKENDT---YGK
        KGS  +F+GIL V    IEITNA  YI Y  LK D+SPGCS KHP LC   E N YQRGCSAI+RCR   + ID +EK        IDD E+D    + +
Subjt:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEK--------IDDKENDT---YGK

Query:  EKRIKTDDKKDIVDGEIEKIHNDDDAEMVL
           IK DDK+ I  G+      +DD E  L
Subjt:  EKRIKTDDKKDIVDGEIEKIHNDDDAEMVL

XP_022159360.1 uncharacterized protein LOC111025777 [Momordica charantia]3.1e-2255.83Show/hide
Query:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEKI--DDKENDTY-GKEKRI
        MAI KGS FIFVGIL  C+  I+ITNA  +I Y PL+GD+SPGCS  HPELC     NPY+RGC++IDRCRGGS++ID  E I   D EN     K K +
Subjt:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEKI--DDKENDTY-GKEKRI

Query:  KTDDKKDIVDGEIEKIHNDD
        K+D K D++ G  EKI   D
Subjt:  KTDDKKDIVDGEIEKIHNDD

XP_022942029.1 auxin-induced in root cultures protein 12-like [Cucurbita moschata]1.7e-1547.57Show/hide
Query:  MAIIKGSTFIFVGILFVCIDTIEIT--NANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGG-SNVIDGDEKIDDKENDTYGKEKRIK
        MAI   +  +  G LF+CID + IT  NAN I+Y  ++ D+SPGC+ KHP LC   + NPY+RGC+AI++CRG  S V++  EKID K ND    E +  
Subjt:  MAIIKGSTFIFVGILFVCIDTIEIT--NANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGG-SNVIDGDEKIDDKENDTYGKEKRIK

Query:  TDD
        TD+
Subjt:  TDD

XP_022961577.1 protein RALF-like 9 [Cucurbita moschata]1.3e-1246.67Show/hide
Query:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKENDTYGKEKRIKTDDKKD
        KG+  IF+ +LFV I+ IEITNA +YI Y PLK +    CS  HP+LC     NPYQRGC+ IDRCRG     + D+ ID+ E D          D++ D
Subjt:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKENDTYGKEKRIKTDDKKD

Query:  IVDGE
        IVD +
Subjt:  IVDGE

TrEMBL top hitse value%identityAlignment
A0A0A0L8B1 Uncharacterized protein1.4e-1554.22Show/hide
Query:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEK
        M + K  T +F+GIL V  D I ITNA  +I+YG +  GD+SPGCS  HPELC     NPYQRGC+ IDRCR G+++ID +E+
Subjt:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEK

A0A6J1C8U5 uncharacterized protein LOC1110084956.2e-1648.46Show/hide
Query:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEK--------IDDKENDT---YGK
        KGS  +F+GIL V    IEITNA  YI Y  LK D+SPGCS KHP LC   E N YQRGCSAI+RCR   + ID +EK        IDD E+D    + +
Subjt:  KGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEK--------IDDKENDT---YGK

Query:  EKRIKTDDKKDIVDGEIEKIHNDDDAEMVL
           IK DDK+ I  G+      +DD E  L
Subjt:  EKRIKTDDKKDIVDGEIEKIHNDDDAEMVL

A0A6J1DYH7 uncharacterized protein LOC1110257771.5e-2255.83Show/hide
Query:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEKI--DDKENDTY-GKEKRI
        MAI KGS FIFVGIL  C+  I+ITNA  +I Y PL+GD+SPGCS  HPELC     NPY+RGC++IDRCRGGS++ID  E I   D EN     K K +
Subjt:  MAIIKGSTFIFVGILFVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEKI--DDKENDTY-GKEKRI

Query:  KTDDKKDIVDGEIEKIHNDD
        K+D K D++ G  EKI   D
Subjt:  KTDDKKDIVDGEIEKIHNDD

A0A6J1FQ53 auxin-induced in root cultures protein 12-like8.0e-1647.57Show/hide
Query:  MAIIKGSTFIFVGILFVCIDTIEIT--NANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGG-SNVIDGDEKIDDKENDTYGKEKRIK
        MAI   +  +  G LF+CID + IT  NAN I+Y  ++ D+SPGC+ KHP LC   + NPY+RGC+AI++CRG  S V++  EKID K ND    E +  
Subjt:  MAIIKGSTFIFVGILFVCIDTIEIT--NANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGG-SNVIDGDEKIDDKENDTYGKEKRIK

Query:  TDD
        TD+
Subjt:  TDD

A0A6J1JNY3 auxin-induced in root cultures protein 12-like6.4e-1345.83Show/hide
Query:  EITNANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKENDTYGKEKRIKTDD-----KKDIVDGEIEKIH
        +IT  N+I Y  +K D+SPGCS KHP LC   E N YQRGC+AI++CR G ++I+  EKID K +D    E +  TD+     K+ +V G   KI+
Subjt:  EITNANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKENDTYGKEKRIKTDD-----KKDIVDGEIEKIH

SwissProt top hitse value%identityAlignment
A8MQM2 Protein RALF-like 63.6e-0547.62Show/hide
Query:  YIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        YI Y  +KGDI PGCS+K+P+ C +     Y RGC    RC+
Subjt:  YIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

A8MQM7 Protein RALF-like 151.6e-0539.66Show/hide
Query:  ILFVCIDTIEITNANYIEY-GPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        ILF+ +   ++    YI Y G   GD +  C   HP  C +   NPY+RGC  I+RCR
Subjt:  ILFVCIDTIEITNANYIEY-GPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

A8MRM1 Protein RALF-like 161.4e-0432.91Show/hide
Query:  FIFVGILFVCIDTIEITNANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKEN
        F+F  ++ V         A  + YG +KGD  P C  K+P  C +  VN Y RGC  I RC   +        +DD E+
Subjt:  FIFVGILFVCIDTIEITNANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKEN

F4ISE1 Protein RALF-like 126.8e-0438.46Show/hide
Query:  VGILFVCIDTI--EITNANYIEYGPLK----GDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        +G+L +C   I   + + NYIEYG +      +  PGC+    E      VN Y RGCS I RCR
Subjt:  VGILFVCIDTI--EITNANYIEYGPLK----GDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

Q3ECL0 Protein RALF-like 91.3e-0740Show/hide
Query:  ILFVCIDTIEITNANYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGG
        ++F+ +   ++    YI Y  + +GD +  C   HP  C + E NPYQRGC  I+RCRGG
Subjt:  ILFVCIDTIEITNANYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGG

Arabidopsis top hitse value%identityAlignment
AT1G60625.1 RALF-like 62.6e-0647.62Show/hide
Query:  YIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        YI Y  +KGDI PGCS+K+P+ C +     Y RGC    RC+
Subjt:  YIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

AT1G61566.1 ralf-like 99.4e-0940Show/hide
Query:  ILFVCIDTIEITNANYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGG
        ++F+ +   ++    YI Y  + +GD +  C   HP  C + E NPYQRGC  I+RCRGG
Subjt:  ILFVCIDTIEITNANYIEYGPL-KGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGG

AT2G19040.1 RALF-like 124.8e-0538.46Show/hide
Query:  VGILFVCIDTI--EITNANYIEYGPLK----GDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        +G+L +C   I   + + NYIEYG +      +  PGC+    E      VN Y RGCS I RCR
Subjt:  VGILFVCIDTI--EITNANYIEYGPLK----GDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

AT2G22055.1 RALF-like 151.2e-0639.66Show/hide
Query:  ILFVCIDTIEITNANYIEY-GPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR
        ILF+ +   ++    YI Y G   GD +  C   HP  C +   NPY+RGC  I+RCR
Subjt:  ILFVCIDTIEITNANYIEY-GPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCR

AT2G32835.1 RALF-like 169.7e-0632.91Show/hide
Query:  FIFVGILFVCIDTIEITNANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKEN
        F+F  ++ V         A  + YG +KGD  P C  K+P  C +  VN Y RGC  I RC   +        +DD E+
Subjt:  FIFVGILFVCIDTIEITNANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCATCAAAGGAAGCACGTTTATTTTTGTTGGCATTCTCTTTGTTTGTATTGACACGATTGAGATTACAAATGCAAATTACATTGAGTATGGTCCTCTAAAAGG
TGATATTAGTCCGGGATGTAGCGCTAAACATCCTGAACTTTGTGGAAGACCTGAAGTAAACCCATATCAAAGAGGTTGTAGTGCAATCGACCGTTGCAGAGGAGGATCTA
ATGTCATAGATGGTGATGAAAAAATAGACGATAAAGAGAATGATACATATGGTAAAGAAAAGAGGATCAAGACCGATGACAAAAAAGATATTGTGGATGGTGAAATAGAA
AAGATTCATAACGACGATGATGCAGAAATGGTGTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCATCAAAGGAAGCACGTTTATTTTTGTTGGCATTCTCTTTGTTTGTATTGACACGATTGAGATTACAAATGCAAATTACATTGAGTATGGTCCTCTAAAAGG
TGATATTAGTCCGGGATGTAGCGCTAAACATCCTGAACTTTGTGGAAGACCTGAAGTAAACCCATATCAAAGAGGTTGTAGTGCAATCGACCGTTGCAGAGGAGGATCTA
ATGTCATAGATGGTGATGAAAAAATAGACGATAAAGAGAATGATACATATGGTAAAGAAAAGAGGATCAAGACCGATGACAAAAAAGATATTGTGGATGGTGAAATAGAA
AAGATTCATAACGACGATGATGCAGAAATGGTGTTATAG
Protein sequenceShow/hide protein sequence
MAIIKGSTFIFVGILFVCIDTIEITNANYIEYGPLKGDISPGCSAKHPELCGRPEVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKENDTYGKEKRIKTDDKKDIVDGEIE
KIHNDDDAEMVL