; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021985 (gene) of Snake gourd v1 genome

Gene IDTan0021985
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionExonuclease domain-containing protein
Genome locationLG09:5227373..5230108
RNA-Seq ExpressionTan0021985
SyntenyTan0021985
Gene Ontology termsGO:0000738 - DNA catabolic process, exonucleolytic (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008296 - 3'-5'-exodeoxyribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590475.1 Exonuclease DPD1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.6e-16689.46Show/hide
Query:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS
        MIT PMCFSILRVPKFGV TLANLWR NFHPL RNYGHS WYDQ G RIY+LEGG +KRWTRKS++TKAGRKAKT+PSSKPSNIRNEILEE +STSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS

Query:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL
        INKSEK+ TQKLQ C+IQ+TI+K+KELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPN+VVHGITSRMVSRPDVPRMKEL
Subjt:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM
        IPILLQFI+SRQKPDGYVLLVAHNARTFDVPFLLKEF RCSVDIP NWLFFDNILLARQLMKS+DSKITKISLQALREYYNIPLVGSAHRAMSDV +LS+
Subjt:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM

Query:  ILQRLTFELKLGIPDLVERSFTASDLINKKKN
        ILQRLTF+LKLGIPDL+ERSFT SDLINKKKN
Subjt:  ILQRLTFELKLGIPDLVERSFTASDLINKKKN

XP_022961373.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita moschata]6.3e-16689.16Show/hide
Query:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS
        MIT PMCFSILRVPKFGV TLANLWR NFHPL RNYGHS WYDQ G R Y+LEGG +KRWTRKS++TKAGRKAKT+PSSKPSNIRNEILEE +STSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS

Query:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL
        INKSEK+ TQKLQ C+IQ+TI+K+KELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPN+VVHGITSRMVSRPDVPRMKEL
Subjt:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM
        IPILLQFI+SRQKPDGYVLLVAHNARTFDVPFLLKEF RCSVDIP NWLFFDNILLARQLMKS+DSKITKISLQALREYYNIPLVGSAHRAMSDV +LS+
Subjt:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM

Query:  ILQRLTFELKLGIPDLVERSFTASDLINKKKN
        ILQRLTF+LKLGIPDL+ERSFT SDLINKKKN
Subjt:  ILQRLTFELKLGIPDLVERSFTASDLINKKKN

XP_022968752.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita maxima]6.9e-16589.43Show/hide
Query:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS
        MIT  MCFSILRVPKFGV TLANLWR NFHPL RNYGHS WYDQ G RIY+LEGG +KRWTRKS+TTKAGRKAKTNPSSKPSNIRNEILEE +STSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS

Query:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL
        INKSEK  TQKLQ C+IQ+TIIK+KELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPN+VVHGITSRMVSRPDVPRMKEL
Subjt:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM
        IPILLQF++SRQKPDGYVLLVAHNAR FDVPFLLKEF RCSVDIP NWLFFDNILLARQLMKS+DSKITKISLQALREYYNIPLVGSAHRAMSDV +LS+
Subjt:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM

Query:  ILQRLTFELKLGIPDLVERSFTASDLINKKK
        ILQRLTF+LKLGIPDL+ERSFT SDLINKKK
Subjt:  ILQRLTFELKLGIPDLVERSFTASDLINKKK

XP_023515555.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]8.2e-16689.16Show/hide
Query:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS
        MIT PMCFSILRVPKFGV TLANLWR NFHPL RNYGHS WYDQ G RIY+LEGG NKRWTRKS++TKAGRKAKT+PSSKPSNIRNEILEE +STSC +S
Subjt:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS

Query:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL
        INKSEK+ TQKLQ C+IQ+TI K+KELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPN+VVHGITSRMVSRPDVPRMKEL
Subjt:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM
        IPILLQFI+SRQKPDGYVLLVAHNARTFDVPFLLKEF RCSVDIP NWLFFDNILLARQLMKS+DSKI KISLQALREYYNIPLVGSAHRAMSDV +LS+
Subjt:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM

Query:  ILQRLTFELKLGIPDLVERSFTASDLINKKKN
        ILQRLTF+LKLGIPDL+ERSFT SDLINKKKN
Subjt:  ILQRLTFELKLGIPDLVERSFTASDLINKKKN

XP_038878496.1 exonuclease DPD1, chloroplastic/mitochondrial isoform X1 [Benincasa hispida]7.9e-16188.32Show/hide
Query:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS
        MI  PMCFSILR PKFGV TLANLWR NFHPL RN  HS W+DQ G RIY+LEGG NKRW RKS+TTKAGRKAK NPSSKP+NIRNEILEE ISTSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS

Query:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL
        INKSEKSETQKLQYCDIQQ IIKNKELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGIT+ MVSRPDVPRMKEL
Subjt:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIRSR--QKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSL
        IPILLQF+ SR  QKPDGYVLLVAHNARTFDVPFLLKEF RCS DIPPNW FFD+I LARQLMKSSDSKITKISLQALREYY+I LVGSAHRAMSDV SL
Subjt:  IPILLQFIRSR--QKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSL

Query:  SMILQRLTFELKLGIPDLVERSFTASDLINKKKN
        S+ILQRLTFELKLGI DL+ERSFTASDLINKKKN
Subjt:  SMILQRLTFELKLGIPDLVERSFTASDLINKKKN

TrEMBL top hitse value%identityAlignment
A0A0A0LVY3 Exonuclease domain-containing protein5.7e-14178.53Show/hide
Query:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE
        MC SI R PK+GV  LANLWR NFHPL RN+GH+CWYDQ   RIY+LEGG NKRWTRKS+TTKAG KAKTNPSSKP+NIRNEIL+E +  SC V+INKSE
Subjt:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE

Query:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKELIPILL
        KSETQKLQYCDIQ TIIK+KE A  VTVITFDIETTGFSR+LDRIVEIA QDLSGGENSTFQTLINP+CYI NS +HGI++RMV  P VPRM+ELIPI+L
Subjt:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKELIPILL

Query:  QFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRL
        QF++SRQKP GYVLLVAHNARTFDVPFLL EF R SVDIP NWLFFD + LARQLMK SDSKITKI+LQAL EYY I L G AHRA+SDV  LS ILQRL
Subjt:  QFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRL

Query:  TFELKLGIPDLVERSFTASDLINKKK
        TF+LKL I DLVER+FT  DLINKKK
Subjt:  TFELKLGIPDLVERSFTASDLINKKK

A0A0N9LRH7 Exonuclease DPD11.7e-14078.22Show/hide
Query:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE
        MC SI R PK+GV  LANLWR NFHPL RN+GH+CWYDQ   RIY+LEGG NKRWTRKS+TTKAG KAKTNPSSKP+NIRNEIL+E +  SC V+INKSE
Subjt:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE

Query:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKELIPILL
        KSETQKLQYCDIQ TIIK+KE A  VTVITFDIETTGFSR+LDRIVEIA QDLSGGENSTFQTLINP+CYI NS +HGI++RMV  P VP M+ELIPI+L
Subjt:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKELIPILL

Query:  QFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRL
        QF++SRQKP GYVLLVAHNARTFDVPFLL EF R SVDIP NWLFFD + LARQLMK SDSKITKI+LQAL EYY I L G AHRA+SDV  LS ILQRL
Subjt:  QFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRL

Query:  TFELKLGIPDLVERSFTASDLINKKK
        TF+LKL I DLVER+FT  DLINKKK
Subjt:  TFELKLGIPDLVERSFTASDLINKKK

A0A6J1C1V8 exonuclease DPD1, chloroplastic/mitochondrial2.3e-15884.64Show/hide
Query:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS
        MITVPMCFSILRVPKFGVHTLAN WR NFHPL RNYGHS WYDQ   RIY+LEGG NKRWTRKS+TTKAGRK K NPSSKPS+IRNEILE  +STSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS

Query:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL
        INK+EKSETQKLQYCDIQQT  K KEL RPVTVI FDIETTGFSR  DRIVEIA QDLSGGENSTFQTLINPECYIPNS+VHGITSRMVSRPDVPRMK+L
Subjt:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM
        IPILLQF+ SRQKPDGY+LLVAHNARTFDVPFLL EF RCS DIP +WLF DN++LARQLM SSDSK++KISLQALREYY+IPLVGSAHRAMSDV SLS+
Subjt:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM

Query:  ILQRLTFELKLGIPDLVERSFTASDLINKKKN
        ILQRLTF+LKL IPDL+ERSFTASDLI K K+
Subjt:  ILQRLTFELKLGIPDLVERSFTASDLINKKKN

A0A6J1HDU6 exonuclease DPD1, chloroplastic/mitochondrial3.0e-16689.16Show/hide
Query:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS
        MIT PMCFSILRVPKFGV TLANLWR NFHPL RNYGHS WYDQ G R Y+LEGG +KRWTRKS++TKAGRKAKT+PSSKPSNIRNEILEE +STSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS

Query:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL
        INKSEK+ TQKLQ C+IQ+TI+K+KELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPN+VVHGITSRMVSRPDVPRMKEL
Subjt:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM
        IPILLQFI+SRQKPDGYVLLVAHNARTFDVPFLLKEF RCSVDIP NWLFFDNILLARQLMKS+DSKITKISLQALREYYNIPLVGSAHRAMSDV +LS+
Subjt:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM

Query:  ILQRLTFELKLGIPDLVERSFTASDLINKKKN
        ILQRLTF+LKLGIPDL+ERSFT SDLINKKKN
Subjt:  ILQRLTFELKLGIPDLVERSFTASDLINKKKN

A0A6J1HUD7 exonuclease DPD1, chloroplastic/mitochondrial3.3e-16589.43Show/hide
Query:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS
        MIT  MCFSILRVPKFGV TLANLWR NFHPL RNYGHS WYDQ G RIY+LEGG +KRWTRKS+TTKAGRKAKTNPSSKPSNIRNEILEE +STSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVS

Query:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL
        INKSEK  TQKLQ C+IQ+TIIK+KELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPN+VVHGITSRMVSRPDVPRMKEL
Subjt:  INKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKEL

Query:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM
        IPILLQF++SRQKPDGYVLLVAHNAR FDVPFLLKEF RCSVDIP NWLFFDNILLARQLMKS+DSKITKISLQALREYYNIPLVGSAHRAMSDV +LS+
Subjt:  IPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM

Query:  ILQRLTFELKLGIPDLVERSFTASDLINKKK
        ILQRLTF+LKLGIPDL+ERSFT SDLINKKK
Subjt:  ILQRLTFELKLGIPDLVERSFTASDLINKKK

SwissProt top hitse value%identityAlignment
A7X1P4 DNA polymerase III PolC-type1.2e-0725.4Show/hide
Query:  RPVTVITFDIETTGFSRDLDRIVEIALQDLSGGE-NSTFQTLINPECYIPNSVVH--GITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNA
        +  T + FD+ETTG S   D+I+E+A   +  GE    F+   NP   +  ++++   IT  M+   D P ++E++    +++       G  + VAHNA
Subjt:  RPVTVITFDIETTGFSRDLDRIVEIALQDLSGGE-NSTFQTLINPECYIPNSVVH--GITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNA

Query:  RTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRLTFELK-LGI
         +FD+ F+   ++R       N      ++   +L ++ +++  K  L  L + Y + L    HRA+ D  + + I  ++  ++K LG+
Subjt:  RTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRLTFELK-LGI

Q682U6 Exonuclease DPD1, chloroplastic/mitochondrial6.7e-6242.72Show/hide
Query:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE
        MC SI +V +  +H+  +      H   +N   S        R  S++G    RW R++V+T       T   S+ SN ++ +L   +  +  +     E
Subjt:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE

Query:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGITSRMVSRPDVPRMKELIPIL
        +S T+   + ++QQ + ++K+L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI + MV RP+VPRM+ELIPI 
Subjt:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGITSRMVSRPDVPRMKELIPIL

Query:  LQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ
        L+++ SRQKP GYV+LVAHN ++FD  FL+ EF RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Subjt:  LQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ

Query:  RLTFELKLGIPDLVERSFTASDL
        +LT +LKL + DLV R  TASD+
Subjt:  RLTFELKLGIPDLVERSFTASDL

Q895K2 DNA polymerase III PolC-type3.4e-1333.33Show/hide
Query:  ITFDIETTGFSRDLDRIVEI-ALQDLSGGENSTFQTLINPECYIPNSVVH--GITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDV
        + FDIETTGFS   D+I+EI A++   G     + T +NPE  IP  ++   GI   MV   D P+++E++P  + FI          +LVAHNA  FDV
Subjt:  ITFDIETTGFSRDLDRIVEI-ALQDLSGGENSTFQTLINPECYIPNSVVH--GITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDV

Query:  PFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRLTFELK
         F+ K  K   +       F + IL    L K    ++ +  L  + ++  IPL+ + HRA+ D  +   IL +   +LK
Subjt:  PFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRLTFELK

Q8RA32 DNA polymerase III PolC-type5.4e-1130.16Show/hide
Query:  ITFDIETTGFSRDLDRIVEIALQDLSGGE-NSTFQTLINPECYIPNSV--VHGITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDV
        + FDIETTG S   D I+EI    +   +   TF+T +NP+  I + +  + GI   MV   D P ++E++P  L+F +         +LVAHNA  FDV
Subjt:  ITFDIETTGFSRDLDRIVEIALQDLSGGE-NSTFQTLINPECYIPNSV--VHGITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDV

Query:  PFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRLTFEL-KLGIPDLVE
         F+  + K+  + +    L  D + L+R L +     +    L  L E++ + L+   HRA+ D  + + I  ++  +L ++GI  + E
Subjt:  PFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRLTFEL-KLGIPDLVE

Q8XJR3 DNA polymerase III PolC-type1.2e-1032.37Show/hide
Query:  ITFDIETTGFSRDLDRIVEIALQDLSGGE-NSTFQTLINPECYIPNSVVH--GITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDV
        + FDIETTGFS   D+I+EI    L  GE   +F T ++P+  IP  +     IT  MV+    P + E++P  ++F+       G  +LVAHNA  FDV
Subjt:  ITFDIETTGFSRDLDRIVEIALQDLSGGE-NSTFQTLINPECYIPNSVVH--GITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDV

Query:  PFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ
         F+ K        +       D + LAR L       + K+ L  + ++  I L  + HRA+ D  + + IL+
Subjt:  PFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ

Arabidopsis top hitse value%identityAlignment
AT5G26940.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.8e-6342.72Show/hide
Query:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE
        MC SI +V +  +H+  +      H   +N   S        R  S++G    RW R++V+T       T   S+ SN ++ +L   +  +  +     E
Subjt:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE

Query:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGITSRMVSRPDVPRMKELIPIL
        +S T+   + ++QQ + ++K+L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI + MV RP+VPRM+ELIPI 
Subjt:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGITSRMVSRPDVPRMKELIPIL

Query:  LQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ
        L+++ SRQKP GYV+LVAHN ++FD  FL+ EF RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Subjt:  LQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ

Query:  RLTFELKLGIPDLVERSFTASDL
        +LT +LKL + DLV R  TASD+
Subjt:  RLTFELKLGIPDLVERSFTASDL

AT5G26940.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.8e-6342.72Show/hide
Query:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE
        MC SI +V +  +H+  +      H   +N   S        R  S++G    RW R++V+T       T   S+ SN ++ +L   +  +  +     E
Subjt:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE

Query:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGITSRMVSRPDVPRMKELIPIL
        +S T+   + ++QQ + ++K+L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI + MV RP+VPRM+ELIPI 
Subjt:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGITSRMVSRPDVPRMKELIPIL

Query:  LQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ
        L+++ SRQKP GYV+LVAHN ++FD  FL+ EF RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Subjt:  LQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ

Query:  RLTFELKLGIPDLVERSFTASDL
        +LT +LKL + DLV R  TASD+
Subjt:  RLTFELKLGIPDLVERSFTASDL

AT5G26940.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.8e-6342.72Show/hide
Query:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE
        MC SI +V +  +H+  +      H   +N   S        R  S++G    RW R++V+T       T   S+ SN ++ +L   +  +  +     E
Subjt:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE

Query:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGITSRMVSRPDVPRMKELIPIL
        +S T+   + ++QQ + ++K+L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI + MV RP+VPRM+ELIPI 
Subjt:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGITSRMVSRPDVPRMKELIPIL

Query:  LQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ
        L+++ SRQKP GYV+LVAHN ++FD  FL+ EF RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Subjt:  LQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ

Query:  RLTFELKLGIPDLVERSFTASDL
        +LT +LKL + DLV R  TASD+
Subjt:  RLTFELKLGIPDLVERSFTASDL

AT5G26940.4 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.8e-6342.72Show/hide
Query:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE
        MC SI +V +  +H+  +      H   +N   S        R  S++G    RW R++V+T       T   S+ SN ++ +L   +  +  +     E
Subjt:  MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSE

Query:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGITSRMVSRPDVPRMKELIPIL
        +S T+   + ++QQ + ++K+L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI + MV RP+VPRM+ELIPI 
Subjt:  KSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGITSRMVSRPDVPRMKELIPIL

Query:  LQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ
        L+++ SRQKP GYV+LVAHN ++FD  FL+ EF RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Subjt:  LQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ

Query:  RLTFELKLGIPDLVERSFTASDL
        +LT +LKL + DLV R  TASD+
Subjt:  RLTFELKLGIPDLVERSFTASDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAACAGTTCCGATGTGCTTTTCAATCTTGCGAGTTCCGAAATTTGGAGTCCACACTTTAGCTAATTTATGGAGGGTAAACTTCCATCCCTTGAAGAGGAATTATGG
TCATAGTTGTTGGTATGATCAGTTTGGTTCTAGAATCTATAGCCTTGAAGGAGGACCGAATAAGAGATGGACCAGAAAATCTGTGACCACAAAAGCAGGGAGGAAAGCAA
AAACCAACCCTAGCAGTAAACCAAGCAATATCAGGAATGAAATCTTAGAGGAACCGATCTCAACAAGCTGTGCAGTTAGCATTAATAAGTCTGAAAAGAGTGAAACTCAG
AAGCTTCAATATTGTGATATTCAGCAAACGATTATTAAGAACAAGGAATTGGCTCGACCGGTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAGACCT
TGATAGAATAGTGGAAATTGCACTTCAAGATCTTTCAGGCGGAGAAAATAGCACCTTCCAAACATTAATAAATCCAGAGTGCTATATTCCAAATTCAGTTGTACATGGCA
TTACAAGCCGAATGGTCAGTAGACCCGATGTTCCAAGGATGAAGGAACTCATACCAATTTTATTACAATTTATTAGAAGCCGTCAGAAACCTGATGGTTATGTATTGTTA
GTAGCTCATAATGCTCGTACATTCGACGTGCCTTTTTTGCTCAAGGAATTCAAACGTTGCTCGGTTGACATTCCTCCAAATTGGCTATTTTTCGATAACATTCTTTTAGC
CCGTCAATTAATGAAATCCTCAGATTCGAAGATTACGAAAATATCATTACAAGCTCTTCGTGAGTATTACAATATTCCACTGGTGGGTTCAGCTCACAGAGCAATGTCCG
ACGTGTGGTCGTTGTCGATGATTCTTCAGAGGCTTACTTTTGAGCTCAAGCTAGGCATCCCGGATCTCGTTGAAAGATCTTTCACAGCATCAGATCTGATTAATAAGAAG
AAGAATTAG
mRNA sequenceShow/hide mRNA sequence
CTAAAATCCAAGAACCAGTTTCTTCGGATTTCCATGTTTCCGAAAAGCACTTCTCCATCTTCTTCGCCACGATTTACACCCTCTCTCTCTCTCATTTAACTTACTTTCTT
CTGTCGGGTGTTCAAAAAATGCAGCAAAATCCTCCCTCAGATTTCCTTTCAGGTTGAAGAAAATTTCTTCCGATGCTGGATTGTTTTGGGTTTTCTGTCTAGTTTTCCTC
TTGTTGTGTTGTGATTTCAAATGATAACAGTTCCGATGTGCTTTTCAATCTTGCGAGTTCCGAAATTTGGAGTCCACACTTTAGCTAATTTATGGAGGGTAAACTTCCAT
CCCTTGAAGAGGAATTATGGTCATAGTTGTTGGTATGATCAGTTTGGTTCTAGAATCTATAGCCTTGAAGGAGGACCGAATAAGAGATGGACCAGAAAATCTGTGACCAC
AAAAGCAGGGAGGAAAGCAAAAACCAACCCTAGCAGTAAACCAAGCAATATCAGGAATGAAATCTTAGAGGAACCGATCTCAACAAGCTGTGCAGTTAGCATTAATAAGT
CTGAAAAGAGTGAAACTCAGAAGCTTCAATATTGTGATATTCAGCAAACGATTATTAAGAACAAGGAATTGGCTCGACCGGTGACAGTTATAACCTTTGACATTGAAACG
ACAGGTTTTAGTAGAGACCTTGATAGAATAGTGGAAATTGCACTTCAAGATCTTTCAGGCGGAGAAAATAGCACCTTCCAAACATTAATAAATCCAGAGTGCTATATTCC
AAATTCAGTTGTACATGGCATTACAAGCCGAATGGTCAGTAGACCCGATGTTCCAAGGATGAAGGAACTCATACCAATTTTATTACAATTTATTAGAAGCCGTCAGAAAC
CTGATGGTTATGTATTGTTAGTAGCTCATAATGCTCGTACATTCGACGTGCCTTTTTTGCTCAAGGAATTCAAACGTTGCTCGGTTGACATTCCTCCAAATTGGCTATTT
TTCGATAACATTCTTTTAGCCCGTCAATTAATGAAATCCTCAGATTCGAAGATTACGAAAATATCATTACAAGCTCTTCGTGAGTATTACAATATTCCACTGGTGGGTTC
AGCTCACAGAGCAATGTCCGACGTGTGGTCGTTGTCGATGATTCTTCAGAGGCTTACTTTTGAGCTCAAGCTAGGCATCCCGGATCTCGTTGAAAGATCTTTCACAGCAT
CAGATCTGATTAATAAGAAGAAGAATTAGTGTGTTAAGTTATATGCACAAATCAATCTTAACTTGGTGATTAAGCTGTGCTTTTGTTGTAATGTTATTTATTAATTGTAA
CTTCAGTTCATTCTTATCAGCAAAATCCTGGGCCATTTTATTTATGGTCACTATATTTGTCTTGATTTCCATATTCTCCAAAAACTAATGCCTGAATTGGAATATCACGA
CAGACAAAGTATAGTTTTGTTTTCTTGCTTTGAATGGATACCGAATGAAACAAGAATTGATAGA
Protein sequenceShow/hide protein sequence
MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQ
KLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLL
VAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRLTFELKLGIPDLVERSFTASDLINKK
KN