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Tan0022014 (gene) of Snake gourd v1 genome

Gene IDTan0022014
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase
Genome locationLG07:32616257..32616595
RNA-Seq ExpressionTan0022014
SyntenyTan0022014
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025769.1 hypothetical protein E6C27_scaffold34G00120 [Cucumis melo var. makuwa]6.6e-1957.73Show/hide
Query:  ETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKCFRVMRCLKE
        E GT +AT    RE + G+S+H   + NMEE IF  I QRLA+ V  AQAD EKKYGIER+KALGAT F+GT D  + + WL LIEKCF VM CL++
Subjt:  ETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKCFRVMRCLKE

KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.7e-2056.6Show/hide
Query:  MARGGKRGR-QVETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKC
        M RG  R     +T         G   S+ ESS P  E NMEE +   + QRL   + SAQ+DPEKKYGIERLKALGATTF GTT+PADA+ WL LIEKC
Subjt:  MARGGKRGR-QVETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKC

Query:  FRVMRC
        FRV RC
Subjt:  FRVMRC

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.5e-1851.38Show/hide
Query:  MARGGKRGR-QVETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKC
        M RG  R     E          G   S+ ESS P+ E N+EE +   + QRL   + SAQ+DPEKKYG ERLKALGATTF GTT+P D + WL LIEKC
Subjt:  MARGGKRGR-QVETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKC

Query:  FRVMRCLKE
        FRV R L++
Subjt:  FRVMRCLKE

XP_038882393.1 uncharacterized protein LOC120073661 [Benincasa hispida]1.3e-1960Show/hide
Query:  VSEGESSHPQ--QEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKCFRVMRCLKE
        +SEGES  PQ   +  +E+ +F  I QRL  S+GSA+AD EKKYGIER KALGA TFEGTTDPA+ ++WL+++EKCF VM CL++
Subjt:  VSEGESSHPQ--QEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKCFRVMRCLKE

XP_038896416.1 uncharacterized protein LOC120084680 [Benincasa hispida]5.4e-2177.27Show/hide
Query:  MEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKCFRVMRC
        ME+ +F  ITQRLA SVGS Q DPEKK+GIERLKALGATTF+GTTDP DA++WL LIEKCF+VMRC
Subjt:  MEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKCFRVMRC

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein3.5e-1858.14Show/hide
Query:  GREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKCFRVMRCLKE
        G   S+ ESS P  E N+EE +   + QRL   +  AQ+D EKKYGIERLKALGATTF GTT+P DA+ WL LIEKCF+V RC ++
Subjt:  GREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKCFRVMRCLKE

A0A5A7SKG0 Uncharacterized protein3.2e-1957.73Show/hide
Query:  ETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKCFRVMRCLKE
        E GT +AT    RE + G+S+H   + NMEE IF  I QRLA+ V  AQAD EKKYGIER+KALGAT F+GT D  + + WL LIEKCF VM CL++
Subjt:  ETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKCFRVMRCLKE

A0A5A7T1M0 Reverse transcriptase1.2e-1851.38Show/hide
Query:  MARGGKRGR-QVETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKC
        M RG  R     E          G   S+ ESS P+ E N+EE +   + QRL   + SAQ+DPEKKYG ERLKALGATTF GTT+P D + WL LIEKC
Subjt:  MARGGKRGR-QVETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKC

Query:  FRVMRCLKE
        FRV R L++
Subjt:  FRVMRCLKE

A0A5D3BB91 Reverse transcriptase1.2e-1851.38Show/hide
Query:  MARGGKRGR-QVETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKC
        M RG  R     E          G   S+ ESS P+ E N+EE +   + QRL   + SAQ+DPEKKYG ERLKALGATTF GTT+P D + WL LIEKC
Subjt:  MARGGKRGR-QVETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKC

Query:  FRVMRCLKE
        FRV R L++
Subjt:  FRVMRCLKE

A0A5D3DES5 DNA/RNA polymerases superfamily protein1.3e-2056.6Show/hide
Query:  MARGGKRGR-QVETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKC
        M RG  R     +T         G   S+ ESS P  E NMEE +   + QRL   + SAQ+DPEKKYGIERLKALGATTF GTT+PADA+ WL LIEKC
Subjt:  MARGGKRGR-QVETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKC

Query:  FRVMRC
        FRV RC
Subjt:  FRVMRC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGAGGTGGCAAACGAGGCAGGCAAGTGGAGACTGGAACTCAAGAAGCTACTGGTGATAGAGGAAGAGAGGTATCAGAGGGAGAGTCTAGTCATCCTCAGCAAGA
GGTGAACATGGAGGAACATATCTTTATGTGGATAACTCAAAGATTAGCTGAAAGTGTTGGATCAGCACAAGCAGATCCAGAAAAGAAGTATGGCATTGAAAGACTGAAAG
CTTTAGGTGCAACAACATTTGAAGGCACGACAGATCCCGCTGATGCTAAGGTTTGGTTAAATCTGATTGAGAAGTGTTTTAGGGTCATGCGATGCCTCAAAGAGGGAAGG
TCAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGAGGTGGCAAACGAGGCAGGCAAGTGGAGACTGGAACTCAAGAAGCTACTGGTGATAGAGGAAGAGAGGTATCAGAGGGAGAGTCTAGTCATCCTCAGCAAGA
GGTGAACATGGAGGAACATATCTTTATGTGGATAACTCAAAGATTAGCTGAAAGTGTTGGATCAGCACAAGCAGATCCAGAAAAGAAGTATGGCATTGAAAGACTGAAAG
CTTTAGGTGCAACAACATTTGAAGGCACGACAGATCCCGCTGATGCTAAGGTTTGGTTAAATCTGATTGAGAAGTGTTTTAGGGTCATGCGATGCCTCAAAGAGGGAAGG
TCAATTTAG
Protein sequenceShow/hide protein sequence
MARGGKRGRQVETGTQEATGDRGREVSEGESSHPQQEVNMEEHIFMWITQRLAESVGSAQADPEKKYGIERLKALGATTFEGTTDPADAKVWLNLIEKCFRVMRCLKEGR
SI