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Tan0022048 (gene) of Snake gourd v1 genome

Gene IDTan0022048
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLate embryogenesis abundant protein, group 6
Genome locationLG01:116673712..116673957
RNA-Seq ExpressionTan0022048
SyntenyTan0022048
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064662.1 late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa]1.9e-2883.75Show/hide
Query:  MIGKTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI
        M+GK EEKA VE+LLPLESSPYVKYKDLEEYK+KGYGAEGH+EPKPNQ GGGTDAPTLSGSG+PEV P  ID VT+QGLI
Subjt:  MIGKTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI

KAG6608652.1 hypothetical protein SDJN03_01994, partial [Cucurbita argyrosperma subsp. sororia]6.2e-2788Show/hide
Query:  EEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI
        EEK SVEELLPLESSPYVKYKDLE+YK KGYG EGH+EPKP Q GGGTDAPTLSGSGFPEV PA+IDAVTRQGLI
Subjt:  EEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI

XP_022135734.1 uncharacterized protein LOC111007621 [Momordica charantia]1.3e-2782.5Show/hide
Query:  KTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPN--QGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLIP
        + EEKASVEELLPLESSPYVKYKDLEEYK++GYGAEGH+EPKPN  QGGGGTDAPTLSG+GFPEV P+ ID  T QGLIP
Subjt:  KTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPN--QGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLIP

XP_022937316.1 uncharacterized protein LOC111443639 [Cucurbita moschata]1.1e-2681.25Show/hide
Query:  MIGKTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI
        ++ + EEK SVEELLPLESSPYVKYKDLEEYK+KGYGAEGH+EPKPNQ GGGTDAPTLSGSGFPEV PA ID VT  GL+
Subjt:  MIGKTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI

XP_023535424.1 uncharacterized protein LOC111796868 [Cucurbita pepo subsp. pepo]2.1e-2782.5Show/hide
Query:  MIGKTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI
        ++ + EEKASVEELLPLESSPYVKYKDLEEYK+KGYGAEGH+EPKPNQ GGGTDAPTLSGSGFPEV PA ID VT  GL+
Subjt:  MIGKTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y6 Uncharacterized protein4.8e-2582.67Show/hide
Query:  EEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI
        EEKA VE+LLPLESSPYVKYKDLEEYK+KGYG EGH+ PKPNQ GGGTDAPTLSGSG PEV P  ID VT+QGLI
Subjt:  EEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI

A0A438ET15 Uncharacterized protein3.7e-1760.53Show/hide
Query:  KTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGL
        + EEKAS    LP+ESSPY+KY DLE+YK++GYG EGH+EPKPNQGGGGTDAPTL+G+   +   + +DA  R G+
Subjt:  KTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGL

A0A5A7V8I8 Late embryogenesis abundant protein group 8 protein9.4e-2983.75Show/hide
Query:  MIGKTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI
        M+GK EEKA VE+LLPLESSPYVKYKDLEEYK+KGYGAEGH+EPKPNQ GGGTDAPTLSGSG+PEV P  ID VT+QGLI
Subjt:  MIGKTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI

A0A6J1C2A9 uncharacterized protein LOC1110076216.1e-2882.5Show/hide
Query:  KTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPN--QGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLIP
        + EEKASVEELLPLESSPYVKYKDLEEYK++GYGAEGH+EPKPN  QGGGGTDAPTLSG+GFPEV P+ ID  T QGLIP
Subjt:  KTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPN--QGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLIP

A0A6J1FA12 uncharacterized protein LOC1114436395.2e-2781.25Show/hide
Query:  MIGKTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI
        ++ + EEK SVEELLPLESSPYVKYKDLEEYK+KGYGAEGH+EPKPNQ GGGTDAPTLSGSGFPEV PA ID VT  GL+
Subjt:  MIGKTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 66.7e-1146.34Show/hide
Query:  TEEKASVEELLPLES--SPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLS-----GSGFPEVTPAAIDAVTRQGL
        TE++    +   LES  +PY+ Y +LE+YK KGYGA+GH EPK   GGG TDAPT S     G G      ++ DA+ RQG+
Subjt:  TEEKASVEELLPLES--SPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLS-----GSGFPEVTPAAIDAVTRQGL

AT2G23110.2 Late embryogenesis abundant protein, group 66.7e-1146.34Show/hide
Query:  TEEKASVEELLPLES--SPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLS-----GSGFPEVTPAAIDAVTRQGL
        TE++    +   LES  +PY+ Y +LE+YK KGYGA+GH EPK   GGG TDAPT S     G G      ++ DA+ RQG+
Subjt:  TEEKASVEELLPLES--SPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLS-----GSGFPEVTPAAIDAVTRQGL

AT2G23120.1 Late embryogenesis abundant protein, group 65.3e-0865.85Show/hide
Query:  SPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSG
        SPY+    LE+YK K YGAEGH EP P  GGG TDAPT SG
Subjt:  SPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSG

AT2G33690.1 Late embryogenesis abundant protein, group 61.4e-1350Show/hide
Query:  IGKTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQ
        + K+EEK    + LPLE+SPY KY+D+E+YKK  YG  GH + KP  GGG TDAPT SG    +  P+AID+  ++
Subjt:  IGKTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGGGAAAACAGAAGAGAAGGCTTCGGTGGAAGAATTGCTGCCATTGGAGAGCAGTCCGTACGTGAAATACAAAGATTTGGAAGAGTACAAAAAGAAAGGGTACGG
GGCGGAGGGTCATGTTGAACCCAAGCCTAACCAGGGCGGCGGCGGCACCGATGCACCCACCTTGTCCGGCAGCGGCTTCCCGGAGGTGACGCCCGCCGCCATTGACGCCG
TCACCAGACAAGGCCTTATCCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAGGGAAAACAGAAGAGAAGGCTTCGGTGGAAGAATTGCTGCCATTGGAGAGCAGTCCGTACGTGAAATACAAAGATTTGGAAGAGTACAAAAAGAAAGGGTACGG
GGCGGAGGGTCATGTTGAACCCAAGCCTAACCAGGGCGGCGGCGGCACCGATGCACCCACCTTGTCCGGCAGCGGCTTCCCGGAGGTGACGCCCGCCGCCATTGACGCCG
TCACCAGACAAGGCCTTATCCCCTGA
Protein sequenceShow/hide protein sequence
MIGKTEEKASVEELLPLESSPYVKYKDLEEYKKKGYGAEGHVEPKPNQGGGGTDAPTLSGSGFPEVTPAAIDAVTRQGLIP