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Tan0022062 (gene) of Snake gourd v1 genome

Gene IDTan0022062
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionthionin-like protein 2
Genome locationLG06:2574226..2575012
RNA-Seq ExpressionTan0022062
SyntenyTan0022062
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575553.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2250Show/hide
Query:  MKSFVIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRGVFECSICIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKKV
        MK+ ++  LV+S VVVGIS  E    +G   CY GC+  C    F+C+ICIG+C+I  + +S+PM  NHM DNRYFC LGCSTS C   L +  P++K++
Subjt:  MKSFVIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRGVFECSICIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKKV

Query:  KGCVNSCSQICNITVN
        KGCVNSCS  C   +N
Subjt:  KGCVNSCSQICNITVN

KAG6575558.1 hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sororia]9.0e-1951.11Show/hide
Query:  IGSSKCYIGCVLPCLRGVFECSICIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKKVKGCVNSCSQICNITVN
        +G   CY GC+  C    F+C+ICIG+C+I  + +S+PM  NHM DNRYFC LGCSTS C   L +  P++K++KGCVNSCS  C   +N
Subjt:  IGSSKCYIGCVLPCLRGVFECSICIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKKVKGCVNSCSQICNITVN

KAG7014099.1 hypothetical protein SDJN02_24272, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-2350.86Show/hide
Query:  MKSFVIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRGVFECSICIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKKV
        MK+ ++  LV+S VVVGIS  E    +G   CY GC+  CL   F+C+ICIG+C+I  + +S+PM  NHM DNRYFC LGCSTS C   L +  P++K++
Subjt:  MKSFVIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRGVFECSICIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKKV

Query:  KGCVNSCSQICNITVN
        KGCVNSCS  C   +N
Subjt:  KGCVNSCSQICNITVN

XP_008461038.1 PREDICTED: beta-hordothionin-like [Cucumis melo]5.8e-1843.55Show/hide
Query:  MKSFVIVWLVMSLVVVGISTDEDQY----------PIGSSKCYIGCVL-PCLRGVFECSICIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNF
        MKS  ++ L++SL+VVG S  E+              GSS CYI C+L  C +GVF+C++C+G+C +     S     N M DN  FC +GC+TSLCT F
Subjt:  MKSFVIVWLVMSLVVVGISTDEDQY----------PIGSSKCYIGCVL-PCLRGVFECSICIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNF

Query:  L--TSKRPDDKKVKGCVNSCSQIC
            ++  D+K+VKGCV+SCSQ C
Subjt:  L--TSKRPDDKKVKGCVNSCSQIC

XP_038899787.1 thionin-like protein 2 [Benincasa hispida]2.1e-1546.43Show/hide
Query:  MKSFVIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRGVFECSI-CIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKK
        MKS +++  +MSL VVG ST    +    +KC++ C +     +  C   C+G+CL      SSP+DFNH+ D  YFC LGC+TSLCT F T K P +KK
Subjt:  MKSFVIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRGVFECSI-CIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKK

Query:  VKGCVNSCSQIC
        V+ CVNSC Q C
Subjt:  VKGCVNSCSQIC

TrEMBL top hitse value%identityAlignment
A0A1S3CDB8 beta-hordothionin-like2.8e-1843.55Show/hide
Query:  MKSFVIVWLVMSLVVVGISTDEDQY----------PIGSSKCYIGCVL-PCLRGVFECSICIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNF
        MKS  ++ L++SL+VVG S  E+              GSS CYI C+L  C +GVF+C++C+G+C +     S     N M DN  FC +GC+TSLCT F
Subjt:  MKSFVIVWLVMSLVVVGISTDEDQY----------PIGSSKCYIGCVL-PCLRGVFECSICIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNF

Query:  L--TSKRPDDKKVKGCVNSCSQIC
            ++  D+K+VKGCV+SCSQ C
Subjt:  L--TSKRPDDKKVKGCVNSCSQIC

A0A6J1DDL8 thionin-like protein 21.8e-1244.44Show/hide
Query:  VIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRGVFECSI-CIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKKVKGC
        ++V LV+SL V G ST    +    +KC++ C +     V  C+  C+ +CL +    S+  DFN   D RYFC LGC+TSLCT F T K P +KKV  C
Subjt:  VIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRGVFECSI-CIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKKVKGC

Query:  VNSCSQIC
        V+SCSQ C
Subjt:  VNSCSQIC

A0A6J1KDK0 thionin-like protein 21.0e-1243.36Show/hide
Query:  MKSFVIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPC-LRGVFECSICIGECLIKQTH-QSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDK
        MKS V++  ++SL V G ST          KCY  C + C +        C G+CL       S+P D NH+ D  YFC LGC+TSLCT F T   P +K
Subjt:  MKSFVIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPC-LRGVFECSICIGECLIKQTH-QSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDK

Query:  KVKGCVNSCSQIC
        KV+ CVNSCS+ C
Subjt:  KVKGCVNSCSQIC

A0A7J7FUW2 Uncharacterized protein7.9e-1336.21Show/hide
Query:  MKSFVIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPC----LRGVFECSI-CIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRP
        +++ V++ +VM +VV G+   E Q P     CY+GC + C        + C++ C+ +C++  T QS   D    + N  FC LGC++SLC+N  T + P
Subjt:  MKSFVIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPC----LRGVFECSI-CIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRP

Query:  DDKKVKGCVNSCSQIC
          +KV+ CVNSCS+ C
Subjt:  DDKKVKGCVNSCSQIC

A0A7N2LPU2 Uncharacterized protein1.4e-1249.38Show/hide
Query:  CYIGCVLPCLRGVFECSI-CIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKKVKGCVNSCSQIC
        CY GC + C+    + +I C  +CLI     S P+DF H  DN YFC LGC++SLCTNF T + P ++KV  CV+SCSQ C
Subjt:  CYIGCVLPCLRGVFECSI-CIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKKVKGCVNSCSQIC

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 29.7e-0828.7Show/hide
Query:  VIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRG-----VFECSI-CIGECLIKQTHQSSP--MDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPD
        ++V +++ +V+  +        I   +CY  C++ C  G       +C   C  ECL     Q SP  +  N+++++ YFC LGC+T  C +  + + P+
Subjt:  VIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRG-----VFECSI-CIGECLIKQTHQSSP--MDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPD

Query:  DKKVKGCVNSCSQIC
         ++V  CV+SCS  C
Subjt:  DKKVKGCVNSCSQIC

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.6.9e-0928.7Show/hide
Query:  VIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRG-----VFECSI-CIGECLIKQTHQSSP--MDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPD
        ++V +++ +V+  +        I   +CY  C++ C  G       +C   C  ECL     Q SP  +  N+++++ YFC LGC+T  C +  + + P+
Subjt:  VIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRG-----VFECSI-CIGECLIKQTHQSSP--MDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPD

Query:  DKKVKGCVNSCSQIC
         ++V  CV+SCS  C
Subjt:  DKKVKGCVNSCSQIC

AT1G12672.1 unknown protein9.3e-0640.74Show/hide
Query:  THQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKKVKGCVNSCSQICN
        T   S  + NH   N Y+C LGCST  C +  + + P+  KV  CV+SCS  C+
Subjt:  THQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKKVKGCVNSCSQICN

AT1G12672.2 unknown protein2.9e-0731.86Show/hide
Query:  MKSFVIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRGVFECSICIGECLIKQTHQSSPMD-FNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKK
        M  FV + +VM +  + I T+ D  P  S      C+  CL                    SS MD  N +  N Y+C LGCST  C +  + + P+  K
Subjt:  MKSFVIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRGVFECSICIGECLIKQTHQSSPMD-FNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKK

Query:  VKGCVNSCSQICN
        V  CV+SCS  C+
Subjt:  VKGCVNSCSQICN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCATTTGTGATAGTTTGGTTGGTTATGAGCTTAGTTGTTGTAGGCATATCCACAGACGAAGATCAATACCCAATTGGCAGCAGCAAGTGCTATATTGGCTGCGT
CCTTCCATGCCTAAGGGGTGTCTTCGAATGTTCAATTTGCATTGGAGAATGTTTAATTAAACAAACTCATCAGTCCTCCCCAATGGACTTCAATCACATGGAGGATAATC
GTTACTTCTGCAACCTTGGCTGTTCCACTTCTCTCTGCACCAACTTCCTCACTAGCAAACGCCCAGATGATAAGAAAGTGAAAGGCTGTGTGAACTCGTGCTCTCAAATA
TGCAACATTACTGTGAATTAA
mRNA sequenceShow/hide mRNA sequence
AAATGAAAATATAAAGTAATTATATATATATTAGTTGGAAGAAGTTTGAAAAGAAAAGAGAGAGTGAGTTTGAAAATGAAGTCATTTGTGATAGTTTGGTTGGTTATGAG
CTTAGTTGTTGTAGGCATATCCACAGACGAAGATCAATACCCAATTGGCAGCAGCAAGTGCTATATTGGCTGCGTCCTTCCATGCCTAAGGGGTGTCTTCGAATGTTCAA
TTTGCATTGGAGAATGTTTAATTAAACAAACTCATCAGTCCTCCCCAATGGACTTCAATCACATGGAGGATAATCGTTACTTCTGCAACCTTGGCTGTTCCACTTCTCTC
TGCACCAACTTCCTCACTAGCAAACGCCCAGATGATAAGAAAGTGAAAGGCTGTGTGAACTCGTGCTCTCAAATATGCAACATTACTGTGAATTAATGAGACAATAATCT
GGGATTTGTCTCTACCAATAAATTAAATAAATGTCCATATGGGTGAAACCAAACCAATCCCATTTGGCCATAAGCTAATCCCAGATTAAGTAATTATGTCATCTATTTAT
GTATATATATATATAGTTTCAAAGTTGTATATCTGCACCCACCAATATGTAAAATATTAGGGTTGCTTTATCCTATATGTATCTTGCTCGTGTGAGACAAGAGCTCTATG
TTCATGCATTAAGTTTGATTTTTTTTTTTTGGTTA
Protein sequenceShow/hide protein sequence
MKSFVIVWLVMSLVVVGISTDEDQYPIGSSKCYIGCVLPCLRGVFECSICIGECLIKQTHQSSPMDFNHMEDNRYFCNLGCSTSLCTNFLTSKRPDDKKVKGCVNSCSQI
CNITVN