CuGenDBv2

Gene ID	Tan0022111
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Coilin
Genome location	LG02:90750011..90755402
RNA-Seq Expression	Tan0022111
Synteny	Tan0022111
Gene Ontology terms	GO:0000387 - spliceosomal snRNP assembly (biological process) GO:0005634 - nucleus (cellular component) GO:0015030 - Cajal body (cellular component) GO:0030619 - U1 snRNA binding (molecular function) GO:0030620 - U2 snRNA binding (molecular function)
InterPro domains	IPR024822 - Coilin IPR031722 - Coilin, N-terminal domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008444387.1 PREDICTED: coilin-like isoform X3 [Cucumis melo]

2.3e-211

69.48

Show/hide

Query:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIADMVE
        RIRLVFEEG LLSKS RKNGLKRSWILLKSHL +I D SSYL DFFLLR ACP GL LSMDGFVLPPFEPTS+LKDKDIVRVKK  DN+ AVDK+     
Subjt:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIADMVE

Query:  EQPADIDVQLLANEELVKECSDGKNEADE-NEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFHQE
                     EELV +C+D KNEAD  +EPYDL  QL DTLD  S KKT+  KRKALKTLHS KMKK R  PT+K +       +   EH+ RF  +
Subjt:  EQPADIDVQLLANEELVKECSDGKNEADE-NEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFHQE

Query:  FFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVIRP
         F SEK ++KKHK SNGHTD   SNKQ   KLQKFSS EKDK RQ+MRKQVK +K+KV Q  VEKS    KLPDE Y EDS+QLAGSSD+EE+VPVVIRP
Subjt:  FFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVIRP

Query:  GHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLIEL
        GHVRFLPLGQ EANQ VHPAQ SMDT+ LNG+  K  +  G+ KSSSW S+C NCEGQSSKP+ +K L+T+N PIDFNKL+PC SLP+RGDIIAYRLIEL
Subjt:  GHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLIEL

Query:  SSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQSGN
        SS+WTPELSSFRVGKV WCKPEANKIM+IPVP+YPFV+KK  N++ + +    PYAEDGSLK DYSSL+DI+IVEHK S+GF+ AA NI EASG KQS N
Subjt:  SSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQSGN

Query:  KWENHSSAPKQSWNKWG-NHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGARGP
        KWENHS+ PKQSWNKWG NH + PKQSWKKW++  S + N KENAWDEILQA SAKKAN SNEVRWRTGEKKAWEGA  P
Subjt:  KWENHSSAPKQSWNKWG-NHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGARGP

XP_022131892.1 coilin-like isoform X1 [Momordica charantia]

2.5e-234

76.17

Show/hide

Query:  DLARIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIAD
        +  RIRL+FEEGHLLSKSQR NGLKRSWILLKSHLHSI D SSYL DFFLLR+ACPDGL LSMDGFVLPPFEPT+VLKDKDIVRVKKKEDN+TAVDK+AD
Subjt:  DLARIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIAD

Query:  MVEEQPADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQ-IHTEHSRRF
        MVE Q ADIDVQL ANEELV + SD KN ADE+E YDLPHQL DTL+  SNKKT CRKRKALKT HS K KKNR+A TAKC+ APSNLQQ I  +H++RF
Subjt:  MVEEQPADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQ-IHTEHSRRF

Query:  HQEFFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVV
         Q+    EK  VKK KSSN HTD  DSNK+N         L+KDK +QLMRKQ KAQKEKV Q IVEKS  K KLPDE YFE+S++LAGSSD+EE+VPVV
Subjt:  HQEFFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVV

Query:  IRPGHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRL
        +RPGHVRFLP GQ  ANQFVHPA+TSMDT  L+ IT KKGQK GKGKSSSW S+CKNCEGQSS  + KKD AT N PIDF+KL+PC SLPK GDIIAYRL
Subjt:  IRPGHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRL

Query:  IELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQ
        I+LSSSWTPELSSFRVGKVSWCKPEANKIMLIPVP+YPFVFKK  NE SA QVDTSPYA+DGSLKADYSSLVDIRIV  + S  F+ AA+ ISE S TKQ
Subjt:  IELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQ

Query:  SGNKWENHSSAPKQSWNKWGNHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGA
        S NKWENHSSAPKQSWNKW N   APK+SWKKWENH +AQENGKENAWDEILQA SAKK N S EVRW   EKK  EGA
Subjt:  SGNKWENHSSAPKQSWNKWGNHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGA

XP_022131894.1 coilin-like isoform X2 [Momordica charantia]

1.0e-224

74.05

Show/hide

Query:  DLARIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIAD
        +  RIRL+FEEGHLLSKSQR NGLKRSWILLKSHLHSI D SSYL DFFLLR+ACPDGL LSMDGFVLPPFEPT+VLKDKDIVRVKKKEDN+TAVDK+AD
Subjt:  DLARIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIAD

Query:  MVEEQPADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFH
        MVE Q ADIDVQL ANEELV + SD KN ADE+E YDLPHQL DTL+  SNKKT CRKRKALKT HS K       P A      +  Q I  +H++RF 
Subjt:  MVEEQPADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFH

Query:  QEFFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVI
        Q+    EK  VKK KSSN HTD  DSNK+N         L+KDK +QLMRKQ KAQKEKV Q IVEKS  K KLPDE YFE+S++LAGSSD+EE+VPVV+
Subjt:  QEFFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVI

Query:  RPGHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLI
        RPGHVRFLP GQ  ANQFVHPA+TSMDT  L+ IT KKGQK GKGKSSSW S+CKNCEGQSS  + KKD AT N PIDF+KL+PC SLPK GDIIAYRLI
Subjt:  RPGHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLI

Query:  ELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQS
        +LSSSWTPELSSFRVGKVSWCKPEANKIMLIPVP+YPFVFKK  NE SA QVDTSPYA+DGSLKADYSSLVDIRIV  + S  F+ AA+ ISE S TKQS
Subjt:  ELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQS

Query:  GNKWENHSSAPKQSWNKWGNHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGA
         NKWENHSSAPKQSWNKW N   APK+SWKKWENH +AQENGKENAWDEILQA SAKK N S EVRW   EKK  EGA
Subjt:  GNKWENHSSAPKQSWNKWGNHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGA

XP_038886780.1 coilin-like isoform X1 [Benincasa hispida]

9.1e-221

72.68

Show/hide

Query:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIADMVE
        RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHL SI D SSYL DFFLLR ACPDGL LSMDGFVLPPFEPTS+LKDKDIVRVKK EDN++ VD++A M+E
Subjt:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIADMVE

Query:  EQPADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFHQEF
         QPAD+ VQLLANE+LVK                              KKTVCRKR+ALKTLHS K+KKN+ APT+KC+       Q  T H+ RF QE 
Subjt:  EQPADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFHQEF

Query:  FFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVIRPG
        F SEK +VKKHKSS GHTDT+DSNKQ +SKLQKFS   KDK RQ+MRK VK QKEKV Q  VEK    GKLPDE YFEDS+QLAGSSD+EE+VPVVIRPG
Subjt:  FFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVIRPG

Query:  HVRFLPLGQ--VEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLIE
        HVRFLP GQ  VEANQ VHPAQ SMDT+ LNGIT K  +K GK KSSS MS CKN EGQSSK + +K  AT NCPIDFNKL+PC SLPKRGDIIAYRLIE
Subjt:  HVRFLPLGQ--VEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLIE

Query:  LSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQSG
        LSSSWTPELSSFRVGKVSWCKPEANKIML+PVP+YPFV+KKT +EES K     PYAEDGSLKADYSSLVDIRIV+ K S+GF+AA   ISEAS TKQS 
Subjt:  LSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQSG

Query:  NKWENHSSAPKQSWNKWG---NHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGARG
        NKWEN+++APKQSWNKW    +H+ APKQSWKKWENH S + NGKENAWDEILQA SAKKAN SNEV+WRTGEKKAWEGA G
Subjt:  NKWENHSSAPKQSWNKWG---NHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGARG

XP_038886781.1 coilin-like isoform X2 [Benincasa hispida]

8.5e-219

72.51

Show/hide

Query:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIADMVE
        RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHL SI D SSYL DFFLLR ACPDGL LSMDGFVLPPFEPTS+LKDKDIVRVKK EDN++ VD++A M+E
Subjt:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIADMVE

Query:  EQPADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFHQEF
         QPAD+ VQLLANE+LVK                              KKTVCRKR+ALKTLHS K+KKN+ APT+KC+       Q  T H+ RF QE 
Subjt:  EQPADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFHQEF

Query:  FFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVIRPG
        F SEK +VKKHKSS GHTDT+DSNKQ   KLQKFS   KDK RQ+MRK VK QKEKV Q  VEK    GKLPDE YFEDS+QLAGSSD+EE+VPVVIRPG
Subjt:  FFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVIRPG

Query:  HVRFLPLGQ--VEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLIE
        HVRFLP GQ  VEANQ VHPAQ SMDT+ LNGIT K  +K GK KSSS MS CKN EGQSSK + +K  AT NCPIDFNKL+PC SLPKRGDIIAYRLIE
Subjt:  HVRFLPLGQ--VEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLIE

Query:  LSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQSG
        LSSSWTPELSSFRVGKVSWCKPEANKIML+PVP+YPFV+KKT +EES K     PYAEDGSLKADYSSLVDIRIV+ K S+GF+AA   ISEAS TKQS 
Subjt:  LSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQSG

Query:  NKWENHSSAPKQSWNKWG---NHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGARG
        NKWEN+++APKQSWNKW    +H+ APKQSWKKWENH S + NGKENAWDEILQA SAKKAN SNEV+WRTGEKKAWEGA G
Subjt:  NKWENHSSAPKQSWNKWG---NHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGARG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BA97 Coilin

4.6e-210

69.13

Show/hide

Query:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIADMVE
        RIRLVFEEG LLSKS RKNGLKRSWILLKSHL +I D SSYL DFFLLR ACP GL LSMDGFVLPPFEPTS+LKDKDIVRVKK  DN+ AVDK+     
Subjt:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIADMVE

Query:  EQPADIDVQLLANEELVKECSDGKNEADE-NEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFHQE
                     EELV +C+D KNEAD  +EPYDL  QL DTLD  S KKT+  KRKALKTLHS KMKK R  PT+K +       +   EH+ RF  +
Subjt:  EQPADIDVQLLANEELVKECSDGKNEADE-NEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFHQE

Query:  FFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVIRP
         F SEK ++KKHK SNGHTD   SNKQ   KLQKFSS EKDK RQ+MRKQVK +K+KV Q  VEKS    KLPDE Y EDS+QLAGSSD+EE+VPVVIRP
Subjt:  FFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVIRP

Query:  GHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLIEL
        GHVRFLPLGQ EANQ VHPAQ SMDT+ LNG+  K  +  G+ KSSSW S+C NCEGQSSKP+ +K L+T+N PIDFNKL+PC SLP+RGDIIAYRLIEL
Subjt:  GHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLIEL

Query:  SSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQSGN
        SS+WTPELSSFRVGKV WCKPEANKIM+IPVP+YPFV+KK  N++ + +    PYAEDGSLK DYSSL+DI+IVEHK S+GF+ AA NI EASG KQS N
Subjt:  SSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQSGN

Query:  KWENHSSAPKQSWNKWG-NHNRAPKQSWKKWENHISAQ---ENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGARGP
        KWENHS+ PKQSWNKWG NH + PKQSWKKW++  S +    N KENAWDEILQA SAKKAN SNEVRWRTGEKKAWEGA  P
Subjt:  KWENHSSAPKQSWNKWG-NHNRAPKQSWKKWENHISAQ---ENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGARGP

A0A1S3BB08 Coilin

1.1e-211

69.48

Show/hide

Query:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIADMVE
        RIRLVFEEG LLSKS RKNGLKRSWILLKSHL +I D SSYL DFFLLR ACP GL LSMDGFVLPPFEPTS+LKDKDIVRVKK  DN+ AVDK+     
Subjt:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIADMVE

Query:  EQPADIDVQLLANEELVKECSDGKNEADE-NEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFHQE
                     EELV +C+D KNEAD  +EPYDL  QL DTLD  S KKT+  KRKALKTLHS KMKK R  PT+K +       +   EH+ RF  +
Subjt:  EQPADIDVQLLANEELVKECSDGKNEADE-NEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFHQE

Query:  FFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVIRP
         F SEK ++KKHK SNGHTD   SNKQ   KLQKFSS EKDK RQ+MRKQVK +K+KV Q  VEKS    KLPDE Y EDS+QLAGSSD+EE+VPVVIRP
Subjt:  FFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVIRP

Query:  GHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLIEL
        GHVRFLPLGQ EANQ VHPAQ SMDT+ LNG+  K  +  G+ KSSSW S+C NCEGQSSKP+ +K L+T+N PIDFNKL+PC SLP+RGDIIAYRLIEL
Subjt:  GHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLIEL

Query:  SSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQSGN
        SS+WTPELSSFRVGKV WCKPEANKIM+IPVP+YPFV+KK  N++ + +    PYAEDGSLK DYSSL+DI+IVEHK S+GF+ AA NI EASG KQS N
Subjt:  SSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQSGN

Query:  KWENHSSAPKQSWNKWG-NHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGARGP
        KWENHS+ PKQSWNKWG NH + PKQSWKKW++  S + N KENAWDEILQA SAKKAN SNEVRWRTGEKKAWEGA  P
Subjt:  KWENHSSAPKQSWNKWG-NHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGARGP

A0A5A7V5I3 Coilin

6.6e-209

68.78

Show/hide

Query:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIADMVE
        RIRLVFEEG LLSKS RKNGLKRSWILLKSHL +I D SSYL DFFLLR ACP GL LSMDGFVLPPFEPTS+LKDKDIVRVKK  DN+ AVDK+     
Subjt:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIADMVE

Query:  EQPADIDVQLLANEELVKECSDGKNEADE-NEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFHQE
                     EELV +C+D KNEAD  +EPYDL  QL DTLD  S KKT+  KRKALKTLHS KMKK R  PT+K +       +   EH+ RF  +
Subjt:  EQPADIDVQLLANEELVKECSDGKNEADE-NEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFHQE

Query:  FFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVIRP
         F SEK ++KKHK SNGHTD   SNKQ +S   KFSS EKDK RQ+MRKQVK +K+KV Q  VEKS    KLPDE Y EDS+QLAGSSD+EE+VPVVIRP
Subjt:  FFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVIRP

Query:  GHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLIEL
        GHVRFLPLGQ EANQ VHPAQ SMDT+ LNG+  K  +  G+ KSSSW S+C NCEGQSSKP+ +K L+T+N PIDFNKL+PC SLP+RGDIIAYRLIEL
Subjt:  GHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLIEL

Query:  SSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQSGN
        SS+WTPELSSFRVGKV WCKPEANKIM+IPVP+YPFV+KK  N++ + +    PYAEDGSLK DYSSL+DI+IVEHK S+GF+ AA NI EASG KQS N
Subjt:  SSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQSGN

Query:  KWENHSSAPKQSWNKWG-NHNRAPKQSWKKWENHISAQ---ENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGARGP
        KWENHS+ PKQSWNKWG NH + PKQSWKKW++  S +    N KENAWDEILQA SAKKAN SNEVRWRTGEKKAWEGA  P
Subjt:  KWENHSSAPKQSWNKWG-NHNRAPKQSWKKWENHISAQ---ENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGARGP

A0A6J1BRI7 Coilin

5.0e-225

74.05

Show/hide

Query:  DLARIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIAD
        +  RIRL+FEEGHLLSKSQR NGLKRSWILLKSHLHSI D SSYL DFFLLR+ACPDGL LSMDGFVLPPFEPT+VLKDKDIVRVKKKEDN+TAVDK+AD
Subjt:  DLARIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIAD

Query:  MVEEQPADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFH
        MVE Q ADIDVQL ANEELV + SD KN ADE+E YDLPHQL DTL+  SNKKT CRKRKALKT HS K       P A      +  Q I  +H++RF 
Subjt:  MVEEQPADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFH

Query:  QEFFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVI
        Q+    EK  VKK KSSN HTD  DSNK+N         L+KDK +QLMRKQ KAQKEKV Q IVEKS  K KLPDE YFE+S++LAGSSD+EE+VPVV+
Subjt:  QEFFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVI

Query:  RPGHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLI
        RPGHVRFLP GQ  ANQFVHPA+TSMDT  L+ IT KKGQK GKGKSSSW S+CKNCEGQSS  + KKD AT N PIDF+KL+PC SLPK GDIIAYRLI
Subjt:  RPGHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLI

Query:  ELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQS
        +LSSSWTPELSSFRVGKVSWCKPEANKIMLIPVP+YPFVFKK  NE SA QVDTSPYA+DGSLKADYSSLVDIRIV  + S  F+ AA+ ISE S TKQS
Subjt:  ELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQS

Query:  GNKWENHSSAPKQSWNKWGNHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGA
         NKWENHSSAPKQSWNKW N   APK+SWKKWENH +AQENGKENAWDEILQA SAKK N S EVRW   EKK  EGA
Subjt:  GNKWENHSSAPKQSWNKWGNHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGA

A0A6J1BS99 Coilin

1.2e-234

76.17

Show/hide

Query:  DLARIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIAD
        +  RIRL+FEEGHLLSKSQR NGLKRSWILLKSHLHSI D SSYL DFFLLR+ACPDGL LSMDGFVLPPFEPT+VLKDKDIVRVKKKEDN+TAVDK+AD
Subjt:  DLARIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIAD

Query:  MVEEQPADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQ-IHTEHSRRF
        MVE Q ADIDVQL ANEELV + SD KN ADE+E YDLPHQL DTL+  SNKKT CRKRKALKT HS K KKNR+A TAKC+ APSNLQQ I  +H++RF
Subjt:  MVEEQPADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQ-IHTEHSRRF

Query:  HQEFFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVV
         Q+    EK  VKK KSSN HTD  DSNK+N         L+KDK +QLMRKQ KAQKEKV Q IVEKS  K KLPDE YFE+S++LAGSSD+EE+VPVV
Subjt:  HQEFFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVV

Query:  IRPGHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRL
        +RPGHVRFLP GQ  ANQFVHPA+TSMDT  L+ IT KKGQK GKGKSSSW S+CKNCEGQSS  + KKD AT N PIDF+KL+PC SLPK GDIIAYRL
Subjt:  IRPGHVRFLPLGQVEANQFVHPAQTSMDTLCLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRL

Query:  IELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQ
        I+LSSSWTPELSSFRVGKVSWCKPEANKIMLIPVP+YPFVFKK  NE SA QVDTSPYA+DGSLKADYSSLVDIRIV  + S  F+ AA+ ISE S TKQ
Subjt:  IELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQ

Query:  SGNKWENHSSAPKQSWNKWGNHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGA
        S NKWENHSSAPKQSWNKW N   APK+SWKKWENH +AQENGKENAWDEILQA SAKK N S EVRW   EKK  EGA
Subjt:  SGNKWENHSSAPKQSWNKWGNHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFSNEVRWRTGEKKAWEGA

SwissProt top hits

e value

%identity

Alignment

P38432 Coilin

1.7e-04

23.08

Show/hide

Query:  DFNKLRPCGSLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIML-----IPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVD
        D++ L    + P+ G+ IA++L+EL+SS++P++S ++ G++    PE  ++ +     +P  + P  F    + E+  +V      ++  +   +  L+D
Subjt:  DFNKLRPCGSLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIML-----IPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVD

Query:  IRIV
         R++
Subjt:  IRIV

Q09003 Coilin

8.5e-04

22.22

Show/hide

Query:  DFNKLRPCGSLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVP----KYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDI
        D++ L    + P+ G +IA++L+E+S ++TPE+S ++ GK+    P   +I +  +     + P  F      E  + +      ++  +  ++++L++ 
Subjt:  DFNKLRPCGSLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVP----KYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDI

Query:  RIVEHKKS
        R++  K+S
Subjt:  RIVEHKKS

Q8RWK8 Coilin

2.5e-64

35.24

Show/hide

Query:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLH-SIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAV------D
        R+RLVFE+  +LSK Q+K GL RSW++L    H +I + S ++   F L +ACP GL+LSM+GFVLPPFE + VLKDKDIV VKKK+++L  +      +
Subjt:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLH-SIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAV------D

Query:  KI--ADMVEEQP-ADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCR----KRKALK---TLHSPKMKKNRFAPTAKCILAPS
         +  A  VEE+P       LLANEE  KE    ++E++E+E  +   + V        +KT  +    KRK  K   T  SP  ++N  A  +  +    
Subjt:  KI--ADMVEEQP-ADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCR----KRKALK---TLHSPKMKKNRFAPTAKCILAPS

Query:  NLQQIHTEHSRRFHQEFFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKF---SSLEKDKRRQLMRKQVKAQKEKV--SQHIVEKSKGKGKLPD-----
          + +  + +    Q    ++     K  S    +   +   Q S++ +K    S+  K  +RQ +R++ K +KE++  +Q +V  S+      D     
Subjt:  NLQQIHTEHSRRFHQEFFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKF---SSLEKDKRRQLMRKQVKAQKEKV--SQHIVEKSKGKGKLPD-----

Query:  ----ETYFEDSKQLAGSSDEEEVVPVVIRPGHVRFLPL-GQVEANQFVHPAQTSMDTLCLNG-ITTKKGQKCGKGKSSSWMSSCKNC-EGQSSKPKPKKD
            ET      +       +EVVPV +RPGH+RF PL G  EA+    P    ++ +  NG +T KKGQK G  KS       ++  E  +++P   + 
Subjt:  ----ETYFEDSKQLAGSSDEEEVVPVVIRPGHVRFLPL-GQVEANQFVHPAQTSMDTLCLNG-ITTKKGQKCGKGKSSSWMSSCKNC-EGQSSKPKPKKD

Query:  LATVNCPIDFNKLRPCGSLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSS
        LA  NCPID+ +L       K+GD+IAYRLIEL+SSWTPE+SSFRVGK+S+  P++  + L+PV ++P   K   +++   Q DTS Y EDGSL+ ++S+
Subjt:  LATVNCPIDFNKLRPCGSLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSS

Query:  LVDIRIVEHKKSIGFKAAADNISEASGTKQSGNKWENHSSAPKQSWNKWGNHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFS
        L+D+R V+   S   + A   + E     QS  K       PK S NK               E    A+ENG+ + W+E+ +ALSAKKA  S
Subjt:  LVDIRIVEHKKSIGFKAAADNISEASGTKQSGNKWENHSSAPKQSWNKWGNHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFS

Arabidopsis top hits

e value

%identity

Alignment

AT1G13030.1 sphere organelles protein-related

1.8e-65

35.24

Show/hide

Query:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLH-SIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAV------D
        R+RLVFE+  +LSK Q+K GL RSW++L    H +I + S ++   F L +ACP GL+LSM+GFVLPPFE + VLKDKDIV VKKK+++L  +      +
Subjt:  RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLH-SIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAV------D

Query:  KI--ADMVEEQP-ADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCR----KRKALK---TLHSPKMKKNRFAPTAKCILAPS
         +  A  VEE+P       LLANEE  KE    ++E++E+E  +   + V        +KT  +    KRK  K   T  SP  ++N  A  +  +    
Subjt:  KI--ADMVEEQP-ADIDVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCR----KRKALK---TLHSPKMKKNRFAPTAKCILAPS

Query:  NLQQIHTEHSRRFHQEFFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKF---SSLEKDKRRQLMRKQVKAQKEKV--SQHIVEKSKGKGKLPD-----
          + +  + +    Q    ++     K  S    +   +   Q S++ +K    S+  K  +RQ +R++ K +KE++  +Q +V  S+      D     
Subjt:  NLQQIHTEHSRRFHQEFFFSEKCVVKKHKSSNGHTDTDDSNKQNSSKLQKF---SSLEKDKRRQLMRKQVKAQKEKV--SQHIVEKSKGKGKLPD-----

Query:  ----ETYFEDSKQLAGSSDEEEVVPVVIRPGHVRFLPL-GQVEANQFVHPAQTSMDTLCLNG-ITTKKGQKCGKGKSSSWMSSCKNC-EGQSSKPKPKKD
            ET      +       +EVVPV +RPGH+RF PL G  EA+    P    ++ +  NG +T KKGQK G  KS       ++  E  +++P   + 
Subjt:  ----ETYFEDSKQLAGSSDEEEVVPVVIRPGHVRFLPL-GQVEANQFVHPAQTSMDTLCLNG-ITTKKGQKCGKGKSSSWMSSCKNC-EGQSSKPKPKKD

Query:  LATVNCPIDFNKLRPCGSLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSS
        LA  NCPID+ +L       K+GD+IAYRLIEL+SSWTPE+SSFRVGK+S+  P++  + L+PV ++P   K   +++   Q DTS Y EDGSL+ ++S+
Subjt:  LATVNCPIDFNKLRPCGSLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFVFKKTTNEESAKQVDTSPYAEDGSLKADYSS

Query:  LVDIRIVEHKKSIGFKAAADNISEASGTKQSGNKWENHSSAPKQSWNKWGNHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFS
        L+D+R V+   S   + A   + E     QS  K       PK S NK               E    A+ENG+ + W+E+ +ALSAKKA  S
Subjt:  LVDIRIVEHKKSIGFKAAADNISEASGTKQSGNKWENHSSAPKQSWNKWGNHNRAPKQSWKKWENHISAQENGKENAWDEILQALSAKKANFS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATTTGGCAAGGATACGTTTGGTTTTCGAAGAAGGGCACCTACTGAGCAAGTCGCAGAGGAAAAATGGACTGAAACGGAGCTGGATTCTTCTCAAATCCCACCTCCA
TTCCATTGACGACCTCTCTTCCTATCTTACCGACTTTTTTCTGCTTCGCGATGCTTGTCCTGATGGCCTCACTCTTTCTATGGATGGTTTTGTTCTACCTCCTTTTGAGC
CTACTTCTGTTTTGAAGGATAAAGATATTGTTAGGGTGAAGAAGAAGGAGGACAATCTGACTGCAGTTGACAAGATTGCAGACATGGTGGAGGAGCAACCTGCTGATATA
GATGTTCAGCTTCTAGCCAACGAGGAGCTTGTGAAGGAGTGCAGTGACGGCAAAAATGAAGCAGATGAAAACGAACCATATGATCTGCCGCATCAATTGGTAGATACATT
GGATACGAGAAGCAATAAGAAAACAGTTTGCAGGAAGAGAAAGGCACTGAAAACACTTCACAGCCCAAAGATGAAGAAAAATAGATTTGCTCCAACAGCCAAATGTATCC
TTGCTCCATCAAATCTTCAGCAGATTCATACAGAGCACAGTCGAAGATTCCATCAGGAATTTTTTTTTTCAGAAAAGTGTGTGGTCAAGAAGCACAAATCATCCAATGGT
CATACTGATACAGATGACTCCAACAAGCAAAATTCTAGTAAACTTCAAAAATTTTCTTCCTTGGAGAAGGATAAAAGGCGGCAATTGATGAGGAAACAAGTCAAAGCTCA
GAAGGAAAAGGTATCGCAACACATAGTTGAAAAGAGTAAGGGTAAGGGTAAGTTACCTGATGAGACTTACTTTGAGGACTCTAAACAGCTAGCTGGCAGTAGTGATGAGG
AAGAAGTTGTCCCCGTGGTAATTAGACCAGGACATGTTCGTTTTCTGCCTCTTGGACAAGTAGAGGCAAACCAGTTTGTCCATCCAGCACAAACTTCAATGGACACCTTA
TGCTTGAATGGGATTACAACTAAGAAAGGACAAAAATGTGGTAAAGGGAAATCTTCATCTTGGATGAGTAGTTGCAAGAACTGTGAAGGACAAAGTTCTAAGCCGAAACC
TAAAAAAGATTTAGCAACTGTGAACTGCCCAATTGACTTCAATAAACTCAGACCTTGTGGTAGCTTGCCTAAGAGAGGTGATATAATTGCATATCGTTTAATTGAATTAT
CATCATCATGGACTCCAGAACTTTCCTCCTTCAGAGTTGGAAAGGTATCATGGTGTAAACCTGAAGCGAATAAGATAATGCTGATTCCTGTTCCGAAATATCCATTTGTT
TTTAAGAAGACAACGAATGAGGAATCAGCTAAACAAGTAGACACTTCTCCATATGCGGAAGATGGCTCTTTAAAGGCAGATTACTCCTCACTCGTTGACATCAGAATTGT
TGAGCATAAAAAGTCGATAGGTTTTAAAGCAGCTGCTGATAATATTAGTGAAGCATCTGGTACAAAACAAAGCGGGAACAAGTGGGAGAACCATTCCAGTGCACCAAAAC
AAAGCTGGAACAAATGGGGGAACCACAACAGGGCACCGAAACAAAGCTGGAAAAAGTGGGAAAACCATATCAGTGCACAGGAAAATGGAAAGGAAAATGCATGGGATGAA
ATTCTCCAGGCTTTGAGTGCGAAAAAAGCGAACTTCTCCAATGAAGTTCGATGGAGAACAGGAGAGAAGAAAGCTTGGGAAGGAGCTCGTGGTCCATGA

mRNA sequence

Show/hide mRNA sequence

TTTCACTTGACCTTTAATTAAAAAAAAAATGAAACGAAACAAAACAGCCTAAATCTCCGTGATCGAGCGATTTGAAGCTCAATTTTTCTTCCGTTTGTTGCGATCACTTT
CCGTTGCTGTCGGTTTCTTCGGATGATCGATGGATTTGGCAAGGATACGTTTGGTTTTCGAAGAAGGGCACCTACTGAGCAAGTCGCAGAGGAAAAATGGACTGAAACGG
AGCTGGATTCTTCTCAAATCCCACCTCCATTCCATTGACGACCTCTCTTCCTATCTTACCGACTTTTTTCTGCTTCGCGATGCTTGTCCTGATGGCCTCACTCTTTCTAT
GGATGGTTTTGTTCTACCTCCTTTTGAGCCTACTTCTGTTTTGAAGGATAAAGATATTGTTAGGGTGAAGAAGAAGGAGGACAATCTGACTGCAGTTGACAAGATTGCAG
ACATGGTGGAGGAGCAACCTGCTGATATAGATGTTCAGCTTCTAGCCAACGAGGAGCTTGTGAAGGAGTGCAGTGACGGCAAAAATGAAGCAGATGAAAACGAACCATAT
GATCTGCCGCATCAATTGGTAGATACATTGGATACGAGAAGCAATAAGAAAACAGTTTGCAGGAAGAGAAAGGCACTGAAAACACTTCACAGCCCAAAGATGAAGAAAAA
TAGATTTGCTCCAACAGCCAAATGTATCCTTGCTCCATCAAATCTTCAGCAGATTCATACAGAGCACAGTCGAAGATTCCATCAGGAATTTTTTTTTTCAGAAAAGTGTG
TGGTCAAGAAGCACAAATCATCCAATGGTCATACTGATACAGATGACTCCAACAAGCAAAATTCTAGTAAACTTCAAAAATTTTCTTCCTTGGAGAAGGATAAAAGGCGG
CAATTGATGAGGAAACAAGTCAAAGCTCAGAAGGAAAAGGTATCGCAACACATAGTTGAAAAGAGTAAGGGTAAGGGTAAGTTACCTGATGAGACTTACTTTGAGGACTC
TAAACAGCTAGCTGGCAGTAGTGATGAGGAAGAAGTTGTCCCCGTGGTAATTAGACCAGGACATGTTCGTTTTCTGCCTCTTGGACAAGTAGAGGCAAACCAGTTTGTCC
ATCCAGCACAAACTTCAATGGACACCTTATGCTTGAATGGGATTACAACTAAGAAAGGACAAAAATGTGGTAAAGGGAAATCTTCATCTTGGATGAGTAGTTGCAAGAAC
TGTGAAGGACAAAGTTCTAAGCCGAAACCTAAAAAAGATTTAGCAACTGTGAACTGCCCAATTGACTTCAATAAACTCAGACCTTGTGGTAGCTTGCCTAAGAGAGGTGA
TATAATTGCATATCGTTTAATTGAATTATCATCATCATGGACTCCAGAACTTTCCTCCTTCAGAGTTGGAAAGGTATCATGGTGTAAACCTGAAGCGAATAAGATAATGC
TGATTCCTGTTCCGAAATATCCATTTGTTTTTAAGAAGACAACGAATGAGGAATCAGCTAAACAAGTAGACACTTCTCCATATGCGGAAGATGGCTCTTTAAAGGCAGAT
TACTCCTCACTCGTTGACATCAGAATTGTTGAGCATAAAAAGTCGATAGGTTTTAAAGCAGCTGCTGATAATATTAGTGAAGCATCTGGTACAAAACAAAGCGGGAACAA
GTGGGAGAACCATTCCAGTGCACCAAAACAAAGCTGGAACAAATGGGGGAACCACAACAGGGCACCGAAACAAAGCTGGAAAAAGTGGGAAAACCATATCAGTGCACAGG
AAAATGGAAAGGAAAATGCATGGGATGAAATTCTCCAGGCTTTGAGTGCGAAAAAAGCGAACTTCTCCAATGAAGTTCGATGGAGAACAGGAGAGAAGAAAGCTTGGGAA
GGAGCTCGTGGTCCATGAAATATTTCCTCTTGTGGTGTGGGTAGCTTTGCTATCATGTTAAGTCAAGCACCTCAAGCTCAAGTTGTTTGTCTTTGAACTTATGCAATTTT
GTACAAAATTTTACTACTTGCTCTGTAAAAGGTTGGAAGGCCATGGAAGCTAGGCATTTTGTTTGAGCGGTTAGGCTCAGTTCAGCCATAGGGTCGAAGTAATTAATTTT
GTTGTAGAAAACATCTCTATCATCATGGTGGAACACTGAAGTTTAACAAGGCTTCCATCCCAAGATAGAATATTTCCGCTACAGGAGTGTATAGTTTTTGCCTGCTGAAA
AAACTTTAATATAAAAACAAGATTAAATTACAAGTTTAATCTATAAACTTTCATGTTTCTACTCGG

Protein sequence

Show/hide protein sequence

MDLARIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLHSIDDLSSYLTDFFLLRDACPDGLTLSMDGFVLPPFEPTSVLKDKDIVRVKKKEDNLTAVDKIADMVEEQPADI
DVQLLANEELVKECSDGKNEADENEPYDLPHQLVDTLDTRSNKKTVCRKRKALKTLHSPKMKKNRFAPTAKCILAPSNLQQIHTEHSRRFHQEFFFSEKCVVKKHKSSNG
HTDTDDSNKQNSSKLQKFSSLEKDKRRQLMRKQVKAQKEKVSQHIVEKSKGKGKLPDETYFEDSKQLAGSSDEEEVVPVVIRPGHVRFLPLGQVEANQFVHPAQTSMDTL
CLNGITTKKGQKCGKGKSSSWMSSCKNCEGQSSKPKPKKDLATVNCPIDFNKLRPCGSLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPKYPFV
FKKTTNEESAKQVDTSPYAEDGSLKADYSSLVDIRIVEHKKSIGFKAAADNISEASGTKQSGNKWENHSSAPKQSWNKWGNHNRAPKQSWKKWENHISAQENGKENAWDE
ILQALSAKKANFSNEVRWRTGEKKAWEGARGP

Tan0022111 (gene) of Snake gourd v1 genome