; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0022116 (gene) of Snake gourd v1 genome

Gene IDTan0022116
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionrho GTPase-activating protein gacH
Genome locationLG10:17870342..17875599
RNA-Seq ExpressionTan0022116
SyntenyTan0022116
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR036020 - WW domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597689.1 hypothetical protein SDJN03_10869, partial [Cucurbita argyrosperma subsp. sororia]4.2e-6374.32Show/hide
Query:  MSTAPNMATITAALERSLQKCSLS----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQ
        MS  PNMATITAALERSLQ CSLS    RHH        + N   + LLQP TTLDLNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED 
Subjt:  MSTAPNMATITAALERSLQKCSLS----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQ

Query:  YTEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG
        Y+ED YYYSD +DD   DS ESSTESS NNNN NNKN+A ME Q+EE+E+EE+ VLVVAGCKSCLMYFMVPK +EDCPKCS G
Subjt:  YTEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG

KAG7029133.1 hypothetical protein SDJN02_10318 [Cucurbita argyrosperma subsp. argyrosperma]5.0e-6474.86Show/hide
Query:  MSTAPNMATITAALERSLQKCSLS----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQ
        MST PNMATITAALERSLQ CSLS    RHH        + N   + LLQP TTLDLNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED 
Subjt:  MSTAPNMATITAALERSLQKCSLS----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQ

Query:  YTEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG
        Y+ED YYYSD +DD   DS+ESSTESS NNNN NNKN+A ME Q+EE+E+EE+ VLVVAGCKSCLMYFMVPK +EDCPKCS G
Subjt:  YTEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG

XP_022932700.1 rho GTPase-activating protein gacH [Cucurbita moschata]1.8e-6174.18Show/hide
Query:  MSTAPNMATITAALERSLQKCSLS---RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQY
        MST PNMATITAALERSLQ CSLS   RHH        + N   + LLQP TTLDLNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR  TED Y
Subjt:  MSTAPNMATITAALERSLQKCSLS---RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQY

Query:  TEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG
        +EDYYY   S+DD   DS+ESSTESS NNNN N KN+A ME Q+EE+E+EED VLVVAGCKSCLMYFMVPK +EDCPKCS G
Subjt:  TEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG

XP_022972321.1 uncharacterized protein LOC111470894 [Cucurbita maxima]9.3e-6373.12Show/hide
Query:  MSTAPNMATITAALERSLQKCSLS-----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTED
        MST PNMATITAALERSLQ CSLS     RHH        + N   +HLLQP TTLDLNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED
Subjt:  MSTAPNMATITAALERSLQKCSLS-----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTED

Query:  QYTEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQ--QEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG
         Y+EDYYY+ D +     DS+ESSTESS NNNN NNKN+A ME Q  QEE+E+EE+ VLVVAGCKSCLMYFMVPK +EDCPKCS G
Subjt:  QYTEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQ--QEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG

XP_023540596.1 histone chaperone RTT106-like isoform X1 [Cucurbita pepo subsp. pepo]7.9e-6274.32Show/hide
Query:  MSTAPNMATITAALERSLQKCSLS----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQ
        MST PNMATITAALERSLQ CSLS    RHH        + N   + LLQP TTLDLNSH+SLP HWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED 
Subjt:  MSTAPNMATITAALERSLQKCSLS----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQ

Query:  YTEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG
        Y+EDYYY  D +DD   DS+ESSTESS NNNN NNKN+A ME Q+EE+E+EED VLVVAGCKSCLMYFMVPK +EDCPKCS G
Subjt:  YTEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG

TrEMBL top hitse value%identityAlignment
A0A6J1F2V9 rho GTPase-activating protein gacH8.5e-6274.18Show/hide
Query:  MSTAPNMATITAALERSLQKCSLS---RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQY
        MST PNMATITAALERSLQ CSLS   RHH        + N   + LLQP TTLDLNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR  TED Y
Subjt:  MSTAPNMATITAALERSLQKCSLS---RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQY

Query:  TEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG
        +EDYYY   S+DD   DS+ESSTESS NNNN N KN+A ME Q+EE+E+EED VLVVAGCKSCLMYFMVPK +EDCPKCS G
Subjt:  TEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG

A0A6J1GTR7 uncharacterized protein LOC111457490 isoform X26.1e-5267.58Show/hide
Query:  MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTE-DQYTE
        MS AP MAT+TAALERSL+ CSLS    A    S S     TH       L LNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR TTE DQY++
Subjt:  MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTE-DQYTE

Query:  DYYYYS--DSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG
        DYY YS  D +DDSSYDSEESST SSNN N N N            +EQ+E+ VLVVAGCK CLMYFMVPKHLE+CPKCS+G
Subjt:  DYYYYS--DSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG

A0A6J1GTV5 protein Tube-like isoform X11.2e-5063.73Show/hide
Query:  MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTE-DQYTE
        MS AP MAT+TAALERSL+ CSLS    A    S S     TH       L LNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR TTE DQY++
Subjt:  MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTE-DQYTE

Query:  DYYYYS-------------DSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG
        DYY YS             D +DDSSYDSEESST SSNN N N N            +EQ+E+ VLVVAGCK CLMYFMVPKHLE+CPKCS+G
Subjt:  DYYYYS-------------DSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG

A0A6J1I5N3 uncharacterized protein LOC1114708944.5e-6373.12Show/hide
Query:  MSTAPNMATITAALERSLQKCSLS-----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTED
        MST PNMATITAALERSLQ CSLS     RHH        + N   +HLLQP TTLDLNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS TED
Subjt:  MSTAPNMATITAALERSLQKCSLS-----RHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTED

Query:  QYTEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQ--QEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG
         Y+EDYYY+ D +     DS+ESSTESS NNNN NNKN+A ME Q  QEE+E+EE+ VLVVAGCKSCLMYFMVPK +EDCPKCS G
Subjt:  QYTEDYYYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQ--QEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG

A0A6J1IQL3 methionine aminopeptidase 2-like1.8e-5165.78Show/hide
Query:  MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTE-DQYTE
        MS  P MAT+TAALERSLQ CSLS         S S     TH       L LNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR TTE DQY++
Subjt:  MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTE-DQYTE

Query:  DYYYYS-------DSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG
        DYY YS       D +DDSSYDSEESSTESSNN N N N            +EQ+E+ VLVVAGCK CLMYFMVPKHLE+CPKCS+G
Subjt:  DYYYYS-------DSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28070.1 unknown protein7.2e-2946.37Show/hide
Query:  MATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR-STTEDQYTEDY----
        MA IT  LERS+Q CSL     ++      S++   H+      L+L+SH S+P H EQCLDLKTGEIYY +W +GM+ KEDPR S +   Y +      
Subjt:  MATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR-STTEDQYTEDY----

Query:  --YYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCST
            +S  E  S Y+SEESS+ESS ++             +  ++EQ+ED VLVVAGCK+CLMYFMVPK  +DCPKC+T
Subjt:  --YYYSDSEDDSSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCST

AT2G33510.1 CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202)4.4e-4256.98Show/hide
Query:  APNMATITAALERSLQKCSLSRHHQALSSDS---SSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRST-TEDQYTE
        APNM TIT +LE+S+  CSL+   + +  D    SSSN+  T +     TL+LNSHLSLP HWEQCLDLKTGEIYYINW+NGM+ KEDPR     D  + 
Subjt:  APNMATITAALERSLQKCSLSRHHQALSSDS---SSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRST-TEDQYTE

Query:  DYYYYSDSEDDSS-YDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCS
        D Y    SE+DSS YDSEESS+ESS ++  N+ +     E ++EE+E+EE+ VLVVAGCK+C MYFMVPK +EDCPKC+
Subjt:  DYYYYSDSEDDSS-YDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCS

AT2G33510.2 unknown protein4.5e-3952.58Show/hide
Query:  APNMATITAALERSLQKCSLSRHHQALSSDS---SSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLK---------------TGEIYYINWRNGMKA
        APNM TIT +LE+S+  CSL+   + +  D    SSSN+  T +     TL+LNSHLSLP HWEQCLDLK               TGEIYYINW+NGM+ 
Subjt:  APNMATITAALERSLQKCSLSRHHQALSSDS---SSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLK---------------TGEIYYINWRNGMKA

Query:  KEDPRST-TEDQYTEDYYYYSDSEDDSS-YDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCS
        KEDPR     D  + D Y    SE+DSS YDSEESS+ESS ++  N+ +     E ++EE+E+EE+ VLVVAGCK+C MYFMVPK +EDCPKC+
Subjt:  KEDPRST-TEDQYTEDYYYYSDSEDDSS-YDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACAGCTCCAAATATGGCAACAATCACAGCCGCTTTAGAACGATCTCTTCAGAAGTGTTCCTTAAGCCGCCATCATCAAGCTCTTTCTTCTGATTCCTCTTCTTC
TAATCAACAACAAACTCATCTTCTTCAACCTCAAACCACTTTGGACCTCAACTCCCATCTCTCTCTCCCTTACCACTGGGAGCAGTGTCTCGATTTAAAGACAGGGGAGA
TATATTACATAAACTGGAGGAATGGGATGAAGGCGAAGGAAGATCCAAGGTCCACCACAGAGGATCAATACACTGAAGATTACTACTACTACTCCGACTCCGAGGATGAC
AGCTCTTACGACAGCGAAGAATCGTCCACGGAGTCGTCGAACAACAATAACAACAACAATAACAAAAACTTTGCAACCATGGAAGCACAACAAGAAGAACAAGAACAAGA
AGAAGATCATGTTTTGGTGGTTGCAGGTTGCAAGAGCTGCTTAATGTATTTTATGGTGCCCAAACATCTTGAAGATTGCCCTAAATGCAGTACTGGTAATGGCTACAGTT
AG
mRNA sequenceShow/hide mRNA sequence
ATGAGTACAGCTCCAAATATGGCAACAATCACAGCCGCTTTAGAACGATCTCTTCAGAAGTGTTCCTTAAGCCGCCATCATCAAGCTCTTTCTTCTGATTCCTCTTCTTC
TAATCAACAACAAACTCATCTTCTTCAACCTCAAACCACTTTGGACCTCAACTCCCATCTCTCTCTCCCTTACCACTGGGAGCAGTGTCTCGATTTAAAGACAGGGGAGA
TATATTACATAAACTGGAGGAATGGGATGAAGGCGAAGGAAGATCCAAGGTCCACCACAGAGGATCAATACACTGAAGATTACTACTACTACTCCGACTCCGAGGATGAC
AGCTCTTACGACAGCGAAGAATCGTCCACGGAGTCGTCGAACAACAATAACAACAACAATAACAAAAACTTTGCAACCATGGAAGCACAACAAGAAGAACAAGAACAAGA
AGAAGATCATGTTTTGGTGGTTGCAGGTTGCAAGAGCTGCTTAATGTATTTTATGGTGCCCAAACATCTTGAAGATTGCCCTAAATGCAGTACTGGTAATGGCTACAGTT
AG
Protein sequenceShow/hide protein sequence
MSTAPNMATITAALERSLQKCSLSRHHQALSSDSSSSNQQQTHLLQPQTTLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYTEDYYYYSDSEDD
SSYDSEESSTESSNNNNNNNNKNFATMEAQQEEQEQEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGNGYS