; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0022117 (gene) of Snake gourd v1 genome

Gene IDTan0022117
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationLG10:10048320..10051922
RNA-Seq ExpressionTan0022117
SyntenyTan0022117
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]2.4e-1136.11Show/hide
Query:  TSQQLDRKLSLEDRIGAFIAESIKKTNHLRAKVENIAF---GHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISLRSENSLGGQAR---
        TS   ++K SLED +GAFI E   + + +  +VE +     G+  +IK++EVQ+ QI  +LN +QKGKF S+ +V  RE CKA++LRS   L    +   
Subjt:  TSQQLDRKLSLEDRIGAFIAESIKKTNHLRAKVENIAF---GHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISLRSENSLGGQAR---

Query:  --PYIDEDDYETPKEGEKEDTPLEEAENSSTPPLLTVLNQISYP
          P I  ++ E  +E  KE TP  +A+  ++  + +  N + YP
Subjt:  --PYIDEDDYETPKEGEKEDTPLEEAENSSTPPLLTVLNQISYP

XP_023889786.1 uncharacterized protein LOC112001854 [Quercus suber]1.1e-1136.18Show/hide
Query:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAES---IKKTNHLRAKVENIAFGHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISL
        N+ NVLQP   F   SQ  ++K+SLED + +F+ E+    KK++ L   +E      G  +K+LEVQ+ Q+ T++NA Q+G F SNT+VN +EQCKAI+L
Subjt:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAES---IKKTNHLRAKVENIAFGHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISL

Query:  RSENSLGGQARPYIDEDDYETPKEGEKEDTPLEEAENSSTPPLLTVLNQISY
        RS   +  +  P  + +   T     +    +EE E       + +LN  S+
Subjt:  RSENSLGGQARPYIDEDDYETPKEGEKEDTPLEEAENSSTPPLLTVLNQISY

XP_030969898.1 uncharacterized protein LOC115990189 [Quercus lobata]1.1e-1137.91Show/hide
Query:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAES---IKKTNHLRAKVENIAFGHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISL
        N+ NVLQP   F   SQ  ++K+SLED + +F+ E+    KK++     +E      G  +K+LEVQ+ Q+ T++NA Q+G FLSNT+VN +EQCKAI+L
Subjt:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAES---IKKTNHLRAKVENIAFGHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISL

Query:  RSENSLGGQARPYIDEDDYETPKEGEKEDTPLEEAENSSTPPLLTVLNQISYP
        RS   +       I E    TP  G+ ++   EE     T     +   IS+P
Subjt:  RSENSLGGQARPYIDEDDYETPKEGEKEDTPLEEAENSSTPPLLTVLNQISYP

XP_035539656.1 uncharacterized protein LOC118344026 [Juglans regia]7.4e-1347.17Show/hide
Query:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAES---IKKTNHLRAKVENIAFGHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISL
        N+ NVLQP   F   SQ  ++K+SLED + +F+ E+    KKT+     +E      G AIK++EVQ+ Q+ T++NA Q+G F SNT+VN REQCKAI+L
Subjt:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAES---IKKTNHLRAKVENIAFGHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISL

Query:  RSENSL
        RS   L
Subjt:  RSENSL

XP_041011488.1 uncharacterized protein LOC121255284 [Juglans microcarpa x Juglans regia]6.2e-1240.3Show/hide
Query:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAES---IKKTNHLRAKVENIAFGHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISL
        N+ N+LQP   F   SQQ ++K+SLED + +F+ E+    KKT+     +E      G AIK++EVQ+ Q+ T++NA Q+G F SNT+VN +EQCKAI+L
Subjt:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAES---IKKTNHLRAKVENIAFGHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISL

Query:  RSENSLGGQARPYIDEDDYETPKEGEKEDTPLEE
        RS   +             E P   E + TP  E
Subjt:  RSENSLGGQARPYIDEDDYETPKEGEKEDTPLEE

TrEMBL top hitse value%identityAlignment
A0A2I4FP56 uncharacterized protein LOC1090008373.1e-0934.36Show/hide
Query:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAESIKKTNHLRAKVENI---AFGHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISL
        N+ NVLQP       SQ   +K+SLE+ + +F+ E+  K     ++++NI         AIK++EVQ+ Q+ T++NA Q+  F SNT+VN  EQ KAI+L
Subjt:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAESIKKTNHLRAKVENI---AFGHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISL

Query:  RSENSL----------------GGQARPYIDEDDYETPKEGEKEDTPLEEAENSSTPPLLTVL
        RS   +                 GQ++  ++E+D +TP+E +K   PL  +   + P L T L
Subjt:  RSENSL----------------GGQARPYIDEDDYETPKEGEKEDTPLEEAENSSTPPLLTVL

A0A2I4G4Q3 uncharacterized protein LOC1090047122.0e-1146.73Show/hide
Query:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAES---IKKTNHLRAKVENIAFGHGKAI-KSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAIS
        N+ NVLQP       SQ  ++K+SLED + +FI E+    KKT+     +E      G AI K++EVQ+ Q+ T++NA Q+G F SNT+VN REQCKAI 
Subjt:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAES---IKKTNHLRAKVENIAFGHGKAI-KSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAIS

Query:  LRSENSL
        LRS   L
Subjt:  LRSENSL

A0A2P5ACQ2 Uncharacterized protein (Fragment)1.8e-0942.2Show/hide
Query:  NVLQPSQNFSST----SQQLDRKLSLEDRIGAFIAESIKKTNHLRAKVENIAF---GHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAIS
        NVL PS  F++     SQ  ++K SLED +  FI E+  + N   A+++NI       G  +KS EVQ+ Q+ +S+NA + GKFLS+T+VN +E  KAI+
Subjt:  NVLQPSQNFSST----SQQLDRKLSLEDRIGAFIAESIKKTNHLRAKVENIAF---GHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAIS

Query:  LRSENSLGG
        L S   +GG
Subjt:  LRSENSLGG

A0A6J1DU19 uncharacterized protein LOC1110243611.1e-1136.11Show/hide
Query:  TSQQLDRKLSLEDRIGAFIAESIKKTNHLRAKVENIAF---GHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISLRSENSLGGQAR---
        TS   ++K SLED +GAFI E   + + +  +VE +     G+  +IK++EVQ+ QI  +LN +QKGKF S+ +V  RE CKA++LRS   L    +   
Subjt:  TSQQLDRKLSLEDRIGAFIAESIKKTNHLRAKVENIAF---GHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISLRSENSLGGQAR---

Query:  --PYIDEDDYETPKEGEKEDTPLEEAENSSTPPLLTVLNQISYP
          P I  ++ E  +E  KE TP  +A+  ++  + +  N + YP
Subjt:  --PYIDEDDYETPKEGEKEDTPLEEAENSSTPPLLTVLNQISYP

A0A6P9DWY0 uncharacterized protein LOC1183440263.6e-1347.17Show/hide
Query:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAES---IKKTNHLRAKVENIAFGHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISL
        N+ NVLQP   F   SQ  ++K+SLED + +F+ E+    KKT+     +E      G AIK++EVQ+ Q+ T++NA Q+G F SNT+VN REQCKAI+L
Subjt:  NSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAES---IKKTNHLRAKVENIAFGHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISL

Query:  RSENSL
        RS   L
Subjt:  RSENSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAACTCTCATAATGTTTTACAACCTTCTCAAAATTTTTCTTCTACATCTCAACAACTAGATAGAAAACTCTCCTTGGAAGATAGGATTGGAGCATTTATTGCAGA
ATCTATCAAGAAAACAAATCATTTGAGGGCAAAGGTGGAGAACATTGCTTTTGGACATGGGAAAGCTATTAAGAGCCTAGAGGTCCAGATGAGTCAGATAGTTACTTCTC
TGAATGCTTTGCAGAAAGGAAAGTTTCTCAGCAATACAAAAGTAAATCTAAGGGAGCAATGCAAAGCCATCAGTCTGAGAAGTGAAAATAGTTTGGGAGGGCAGGCGAGA
CCATACATTGATGAGGATGATTATGAGACTCCTAAGGAGGGAGAGAAGGAAGACACACCCCTTGAAGAAGCTGAAAATTCATCAACTCCACCTCTTCTAACTGTCCTAAA
TCAGATCTCATATCCTTAG
mRNA sequenceShow/hide mRNA sequence
GAACATTCAGGCAGCTCGAGGGTGAGCAATTGTTCGAGACTTGGGACAGGTACAAAGAACTTCTAAAAAAATGCACACATCACAAATATCTAGATTGGCTTCAAATCCAG
TTGTTCGAAAATGGGTTGAATGAAAATACCAAAATGATCCTAAATGCATTAATTTGAGGGGCAATCTTGTCTAAGACCATTCTGGAAGCAACAAAACCTACCGGGGGAGA
TGGTTGCTACTAGCTAACAGTGCTCCACTGAACGATCTATCACCAAGCCAATAGCAGGAATCTATGAGATTAGTGAGGTAAGTGCTTTTGAAGGCACAAATGGCTTCTTT
AACTAACTCTTTATTCAATCTCTTAGGTTTAGGAAACAACTCATCTATTGCATCATTAGTTGGCACCCTCCCCAGTATGGAAGAGAGACGAGCATGGATAAAGTGAATTA
TGTCAACAACTGGAGATATAACTAGGGTGGCAATCACATGCACAACTCTCATAATGTTTTACAACCTTCTCAAAATTTTTCTTCTACATCTCAACAACTAGATAGAAAAC
TCTCCTTGGAAGATAGGATTGGAGCATTTATTGCAGAATCTATCAAGAAAACAAATCATTTGAGGGCAAAGGTGGAGAACATTGCTTTTGGACATGGGAAAGCTATTAAG
AGCCTAGAGGTCCAGATGAGTCAGATAGTTACTTCTCTGAATGCTTTGCAGAAAGGAAAGTTTCTCAGCAATACAAAAGTAAATCTAAGGGAGCAATGCAAAGCCATCAG
TCTGAGAAGTGAAAATAGTTTGGGAGGGCAGGCGAGACCATACATTGATGAGGATGATTATGAGACTCCTAAGGAGGGAGAGAAGGAAGACACACCCCTTGAAGAAGCTG
AAAATTCATCAACTCCACCTCTTCTAACTGTCCTAAATCAGATCTCATATCCTTAGCGATTCAAAAAGAAGAATTTGAATGAGGAGTTCTCTATATTTCTCAATTTGTTT
AAAAATCTTCAAATAACTATTCTCTTTGCAGATGCACTAGTAAAGATACCGAGTTATGCAAAGTTCATGAAGCATATACTGACGAAGAAGTGACAGTTCGAGTCCACAGA
AATTGTATTCATGACGAGGAGTGTAGTTACACACTCCACAAGAATCTACCACCTAAGTTGAAAGATCTAGGGAGTTTTATTGTTCCCTGCACTATTGGTAGTTCTTAGTT
TCATAAGGTTTTTATGCATGTGATTTAGGTGCCTCCATTAATCTTATGCCTTATGTTGTGTACATGACTCTTGGACTTAAGGAACTGAACCCCATAGGCATCTCTCCAAC
TTGCACATCGCTCGATCACATATCCTAGAGGAATAGTGGTGGATGTCGTGGTGAAGGTCAATAAATTTTTTATTCCTGTGGACTTCATAGTGCTCGATATGGAGGGCGAT
GATATTTCCATCATCCTAGGGTGACCTCTCCTTGCTATGGGATAAACTTCTATAAAGGGCCCTTTGGAGTGGGTGCTTATGAATGACTTAGGCATGAACCCAAACAAGAA
ATGATTTGCCAAGAGAGTCTCGTCTAGCTAAAGACATTAAAGAAAGCGCTTCCTAGAGGAATCGAGCAATCATGGTGAAATAGAGCTTTGGACGAAGAAATATGGGTCAG
TTGGCGGAAAATACATGTTATGGAGCATAGAATCAAGCAAAAATATAAAGGAAAATTTGGCCATTGACACAGCGTTGAGACACCACAAATGGTATTTCAACGCCATGCTT
GCGGGAAAATGCCCTAGAAGACACACATTAATGGTGTTGCAACGCTGAATTTAGTGTTGTAACGCCATAAAGATGCACGCGTTGAATACTTTCGTCCATTGCGTTGCAAC
GCTGCTTGCAAGGTTGCAGAGTCACCCCGTGTTTCCAAAATTGGTGAGGAATTTGGTCACAACGTTGCAACTTGTAGTAGCATTGCAACACCATGATACTCTATAAATAG
AACATGATGGGTGCAATTTTAGGGGAATCTATTTGGAGAGACGAGTCTACAAATCCAAAAATTACCTTGTTTTAGAGCTAGATGAGTGTTTTTTGAGAGCCAAGGAAGGA
ATTCAAGGCTCAAGATCGAGGTGTCCATGACGAACACGAGTGTGGCACGTGTCCAAGAGTTTTCTTTCTATCTCTTTTGCATTGTAGTTTTTAATTTTGATATTTTGTAT
TAGTTTAGGG
Protein sequenceShow/hide protein sequence
MHNSHNVLQPSQNFSSTSQQLDRKLSLEDRIGAFIAESIKKTNHLRAKVENIAFGHGKAIKSLEVQMSQIVTSLNALQKGKFLSNTKVNLREQCKAISLRSENSLGGQAR
PYIDEDDYETPKEGEKEDTPLEEAENSSTPPLLTVLNQISYP