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Tan0022139 (gene) of Snake gourd v1 genome

Gene IDTan0022139
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:75661663..75662109
RNA-Seq ExpressionTan0022139
SyntenyTan0022139
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057006.1 hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa]1.4e-1646.15Show/hide
Query:  MGIHSKTKLDISSSSTNYSLKSLSFSWYLTSKDRQ-----PIKTADKKIKT---GFGFGSTSSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRS-
        MGIH+K K  +SS++T+  + SLSFS YL SKDR+      I+T D+KIK    GF FG                   P  + S VS     D  G RS 
Subjt:  MGIHSKTKLDISSSSTNYSLKSLSFSWYLTSKDRQ-----PIKTADKKIKT---GFGFGSTSSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRS-

Query:  -LVVRNNSIRRGGRRIREEEDESPSWSGWSVFRSFVSPCRECRASKPAVIEPRSVQ
          +VRNNSIRRG ++IREE++E    S W V  SFV PCRECRASKP V++PR +Q
Subjt:  -LVVRNNSIRRGGRRIREEEDESPSWSGWSVFRSFVSPCRECRASKPAVIEPRSVQ

KAG6573282.1 hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3966.89Show/hide
Query:  MGIHSKTKLDISSSSTNYSLKSLSFSWYLTSKDRQP---IKTADKKIKTGFGFGSTSSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRSLVVRNN
        M +HSKT  DISSSS++ S  SLSFS ++TSKDRQP   I+T D++    F FG  SSV +HY GG+ LV PRP+P+Q+QVSCKR+L+ D    L+VRN+
Subjt:  MGIHSKTKLDISSSSTNYSLKSLSFSWYLTSKDRQP---IKTADKKIKTGFGFGSTSSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRSLVVRNN

Query:  SIRRGGRRIREEEDESPSWSGWSVFRSFVSPCRECRASKPAVIEPRSVQRA
        SIRRGGRRIREEE+ES +WSGWSVFRSFVSPCRECRASKPAV+E R VQRA
Subjt:  SIRRGGRRIREEEDESPSWSGWSVFRSFVSPCRECRASKPAVIEPRSVQRA

KGN64696.1 hypothetical protein Csa_013090 [Cucumis sativus]1.5e-1544.9Show/hide
Query:  SSSTNYSLKSLSFSWYLTSKDRQ-----PIKTADKKIKT---GFGFGST---SSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRS--LVVRNNSI
        SS+T+  L SLSFS YL SKDR       I+T D+KIK    GF F  T   SSV D+                            G RS   +VRNNSI
Subjt:  SSSTNYSLKSLSFSWYLTSKDRQ-----PIKTADKKIKT---GFGFGST---SSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRS--LVVRNNSI

Query:  RRGGRRIREEEDESPSWSGWSVFRSFVSPCRECRASKPAVIEPRSVQ
        +RG ++I EE+DES  WSGW +F  FV PCRECRA KP+V++PR +Q
Subjt:  RRGGRRIREEEDESPSWSGWSVFRSFVSPCRECRASKPAVIEPRSVQ

XP_022139818.1 uncharacterized protein LOC111010640 [Momordica charantia]1.1e-2154.19Show/hide
Query:  MGIHSK--TKLDISSS-STNYSL-KSLSFSWYLTSKDRQP-----IKTADKKIKTGFGFGSTSSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRS
        MGIH K   + DISSS S++YS   SLSF+ YLT KDR+P     IKT D+    GF FG      D ++GG            S    +R  D+DG+R 
Subjt:  MGIHSK--TKLDISSS-STNYSL-KSLSFSWYLTSKDRQP-----IKTADKKIKTGFGFGSTSSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRS

Query:  LVVRNNSIRRGGRRIREEEDESPSWSGW-SVFRSFVSPCRECRASKP-AVIEPRS
        LVVRNNSIRRGGRRI++EE+ES S + W SVFRSFVSPCRECRASKP AVIE ++
Subjt:  LVVRNNSIRRGGRRIREEEDESPSWSGW-SVFRSFVSPCRECRASKP-AVIEPRS

TrEMBL top hitse value%identityAlignment
A0A0A0LXF9 Uncharacterized protein7.5e-1644.9Show/hide
Query:  SSSTNYSLKSLSFSWYLTSKDRQ-----PIKTADKKIKT---GFGFGST---SSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRS--LVVRNNSI
        SS+T+  L SLSFS YL SKDR       I+T D+KIK    GF F  T   SSV D+                            G RS   +VRNNSI
Subjt:  SSSTNYSLKSLSFSWYLTSKDRQ-----PIKTADKKIKT---GFGFGST---SSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRS--LVVRNNSI

Query:  RRGGRRIREEEDESPSWSGWSVFRSFVSPCRECRASKPAVIEPRSVQ
        +RG ++I EE+DES  WSGW +F  FV PCRECRA KP+V++PR +Q
Subjt:  RRGGRRIREEEDESPSWSGWSVFRSFVSPCRECRASKPAVIEPRSVQ

A0A5D3DS79 Uncharacterized protein6.8e-1746.15Show/hide
Query:  MGIHSKTKLDISSSSTNYSLKSLSFSWYLTSKDRQ-----PIKTADKKIKT---GFGFGSTSSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRS-
        MGIH+K K  +SS++T+  + SLSFS YL SKDR+      I+T D+KIK    GF FG                   P  + S VS     D  G RS 
Subjt:  MGIHSKTKLDISSSSTNYSLKSLSFSWYLTSKDRQ-----PIKTADKKIKT---GFGFGSTSSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRS-

Query:  -LVVRNNSIRRGGRRIREEEDESPSWSGWSVFRSFVSPCRECRASKPAVIEPRSVQ
          +VRNNSIRRG ++IREE++E    S W V  SFV PCRECRASKP V++PR +Q
Subjt:  -LVVRNNSIRRGGRRIREEEDESPSWSGWSVFRSFVSPCRECRASKPAVIEPRSVQ

A0A6J1CGL7 uncharacterized protein LOC1110106405.3e-2254.19Show/hide
Query:  MGIHSK--TKLDISSS-STNYSL-KSLSFSWYLTSKDRQP-----IKTADKKIKTGFGFGSTSSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRS
        MGIH K   + DISSS S++YS   SLSF+ YLT KDR+P     IKT D+    GF FG      D ++GG            S    +R  D+DG+R 
Subjt:  MGIHSK--TKLDISSS-STNYSL-KSLSFSWYLTSKDRQP-----IKTADKKIKTGFGFGSTSSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRS

Query:  LVVRNNSIRRGGRRIREEEDESPSWSGW-SVFRSFVSPCRECRASKP-AVIEPRS
        LVVRNNSIRRGGRRI++EE+ES S + W SVFRSFVSPCRECRASKP AVIE ++
Subjt:  LVVRNNSIRRGGRRIREEEDESPSWSGW-SVFRSFVSPCRECRASKP-AVIEPRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTCACTCAAAGACGAAGCTTGATATCAGTAGCAGCAGCACTAATTATTCGTTGAAGTCCCTCTCCTTTTCTTGGTACTTAACTTCTAAAGATCGGCAGCCGAT
TAAAACAGCCGACAAGAAGATCAAAACAGGATTCGGGTTTGGTTCGACTTCGAGTGTGGGCGATCATTATAATGGTGGCGAGGTTTTGGTTTTTCCTCGGCCGAAGCCGA
AACAATCCCAAGTTTCTTGTAAACGGCGACTGGATAATGATGGACGGAGATCGTTGGTTGTAAGAAACAACAGTATCAGAAGAGGAGGACGAAGGATAAGGGAGGAAGAA
GACGAGTCGCCGTCGTGGTCTGGATGGAGTGTTTTCCGGTCGTTTGTTTCGCCATGCAGGGAGTGCCGAGCTAGCAAGCCCGCTGTAATTGAACCGCGTTCTGTTCAAAG
GGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATTCACTCAAAGACGAAGCTTGATATCAGTAGCAGCAGCACTAATTATTCGTTGAAGTCCCTCTCCTTTTCTTGGTACTTAACTTCTAAAGATCGGCAGCCGAT
TAAAACAGCCGACAAGAAGATCAAAACAGGATTCGGGTTTGGTTCGACTTCGAGTGTGGGCGATCATTATAATGGTGGCGAGGTTTTGGTTTTTCCTCGGCCGAAGCCGA
AACAATCCCAAGTTTCTTGTAAACGGCGACTGGATAATGATGGACGGAGATCGTTGGTTGTAAGAAACAACAGTATCAGAAGAGGAGGACGAAGGATAAGGGAGGAAGAA
GACGAGTCGCCGTCGTGGTCTGGATGGAGTGTTTTCCGGTCGTTTGTTTCGCCATGCAGGGAGTGCCGAGCTAGCAAGCCCGCTGTAATTGAACCGCGTTCTGTTCAAAG
GGCTTGA
Protein sequenceShow/hide protein sequence
MGIHSKTKLDISSSSTNYSLKSLSFSWYLTSKDRQPIKTADKKIKTGFGFGSTSSVGDHYNGGEVLVFPRPKPKQSQVSCKRRLDNDGRRSLVVRNNSIRRGGRRIREEE
DESPSWSGWSVFRSFVSPCRECRASKPAVIEPRSVQRA