CuGenDBv2

Gene ID	Tan0022177
Organism	Trichosanthes anguina (Snake gourd v1)
Description	39S ribosomal protein L46, mitochondrial-like isoform X2
Genome location	LG11:35534859..35560603
RNA-Seq Expression	Tan0022177
Synteny	Tan0022177
Gene Ontology terms	GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR040008 - 39S ribosomal protein L46, mitochondrial

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022925096.1 39S ribosomal protein L46, mitochondrial-like isoform X1 [Cucurbita moschata]

5.2e-102

83.84

Show/hide

Query:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL
        MQ  FS+AGQLVK+RGFSTNSEKIVASVLFERLPVVIPK+DPVVYAFQEFK                      GKGDYQIDYVPAPRITEADKTNDRKSL
Subjt:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL

Query:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK
        QRALDRRLYLLLYGT+IGAPDKKPVWHFPEKVYETEETLRKCAE ALASILG LSHTYFVGNAPM HMVVPP ETAQV SL++FFFK QVIATNKFNIEK
Subjt:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK

Query:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS
        CEDFVWVTKDEL+EYFPDQAEFFKKMIIS
Subjt:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS

XP_022954202.1 39S ribosomal protein L46, mitochondrial-like isoform X1 [Cucurbita moschata]

3.0e-102

83.84

Show/hide

Query:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL
        MQR FS+A QLVK+RGFSTNSEKIVASVLFERLPVVIPK+DPVVYAFQEFK                      GKGDYQIDYVPAPRITEADKTNDRKSL
Subjt:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL

Query:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK
        QRALDRRLYLLLYG SIGAPDKKPVWHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HMVVPP ETAQVPSLK+FFFKSQVIATNKFNI K
Subjt:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK

Query:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS
        CEDFVWVTKDEL+EYFPDQAEFFKKMIIS
Subjt:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS

XP_022954203.1 39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita moschata]

3.0e-102

83.84

Show/hide

Query:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL
        MQR FS+A QLVK+RGFSTNSEKIVASVLFERLPVVIPK+DPVVYAFQEFK                      GKGDYQIDYVPAPRITEADKTNDRKSL
Subjt:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL

Query:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK
        QRALDRRLYLLLYG SIGAPDKKPVWHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HMVVPP ETAQVPSLK+FFFKSQVIATNKFNI K
Subjt:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK

Query:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS
        CEDFVWVTKDEL+EYFPDQAEFFKKMIIS
Subjt:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS

XP_038897002.1 54S ribosomal protein L17, mitochondrial isoform X1 [Benincasa hispida]

4.0e-102

84.28

Show/hide

Query:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL
        MQR F  AGQLVK+R FSTNSEKIVASVLFERLPVVIPK+DPVVYAFQEFK                      GKGDYQIDYVPAPRITEADKTNDRKSL
Subjt:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL

Query:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK
        QRALDRRLYLLLYGTSIGAPD+KPVWHFPEKVYETEETLRKCAESAL SILGDLSHTYFVGNAPMGHMVVP  ETAQVP LK+FFFKSQVIATNKFNI K
Subjt:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK

Query:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS
        CEDFVWVTKDEL+EYFPDQAEFFKKMIIS
Subjt:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS

XP_038897003.1 54S ribosomal protein L17, mitochondrial isoform X2 [Benincasa hispida]

4.0e-102

84.28

Show/hide

Query:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL
        MQR F  AGQLVK+R FSTNSEKIVASVLFERLPVVIPK+DPVVYAFQEFK                      GKGDYQIDYVPAPRITEADKTNDRKSL
Subjt:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL

Query:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK
        QRALDRRLYLLLYGTSIGAPD+KPVWHFPEKVYETEETLRKCAESAL SILGDLSHTYFVGNAPMGHMVVP  ETAQVP LK+FFFKSQVIATNKFNI K
Subjt:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK

Query:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS
        CEDFVWVTKDEL+EYFPDQAEFFKKMIIS
Subjt:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EB49 39S ribosomal protein L46, mitochondrial-like isoform X3

2.5e-102

83.84

Show/hide

Query:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL
        MQ  FS+AGQLVK+RGFSTNSEKIVASVLFERLPVVIPK+DPVVYAFQEFK                      GKGDYQIDYVPAPRITEADKTNDRKSL
Subjt:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL

Query:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK
        QRALDRRLYLLLYGT+IGAPDKKPVWHFPEKVYETEETLRKCAE ALASILG LSHTYFVGNAPM HMVVPP ETAQV SL++FFFK QVIATNKFNIEK
Subjt:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK

Query:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS
        CEDFVWVTKDEL+EYFPDQAEFFKKMIIS
Subjt:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS

A0A6J1EB89 39S ribosomal protein L46, mitochondrial-like isoform X1

2.5e-102

83.84

Show/hide

Query:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL
        MQ  FS+AGQLVK+RGFSTNSEKIVASVLFERLPVVIPK+DPVVYAFQEFK                      GKGDYQIDYVPAPRITEADKTNDRKSL
Subjt:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL

Query:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK
        QRALDRRLYLLLYGT+IGAPDKKPVWHFPEKVYETEETLRKCAE ALASILG LSHTYFVGNAPM HMVVPP ETAQV SL++FFFK QVIATNKFNIEK
Subjt:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK

Query:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS
        CEDFVWVTKDEL+EYFPDQAEFFKKMIIS
Subjt:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS

A0A6J1EEA2 39S ribosomal protein L46, mitochondrial-like isoform X2

2.5e-102

83.84

Show/hide

Query:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL
        MQ  FS+AGQLVK+RGFSTNSEKIVASVLFERLPVVIPK+DPVVYAFQEFK                      GKGDYQIDYVPAPRITEADKTNDRKSL
Subjt:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL

Query:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK
        QRALDRRLYLLLYGT+IGAPDKKPVWHFPEKVYETEETLRKCAE ALASILG LSHTYFVGNAPM HMVVPP ETAQV SL++FFFK QVIATNKFNIEK
Subjt:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK

Query:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS
        CEDFVWVTKDEL+EYFPDQAEFFKKMIIS
Subjt:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS

A0A6J1GQE8 39S ribosomal protein L46, mitochondrial-like isoform X1

1.5e-102

83.84

Show/hide

Query:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL
        MQR FS+A QLVK+RGFSTNSEKIVASVLFERLPVVIPK+DPVVYAFQEFK                      GKGDYQIDYVPAPRITEADKTNDRKSL
Subjt:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL

Query:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK
        QRALDRRLYLLLYG SIGAPDKKPVWHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HMVVPP ETAQVPSLK+FFFKSQVIATNKFNI K
Subjt:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK

Query:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS
        CEDFVWVTKDEL+EYFPDQAEFFKKMIIS
Subjt:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS

A0A6J1GQF1 39S ribosomal protein L46, mitochondrial-like isoform X2

1.5e-102

83.84

Show/hide

Query:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL
        MQR FS+A QLVK+RGFSTNSEKIVASVLFERLPVVIPK+DPVVYAFQEFK                      GKGDYQIDYVPAPRITEADKTNDRKSL
Subjt:  MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSL

Query:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK
        QRALDRRLYLLLYG SIGAPDKKPVWHFPEK YETEETLRKCAESAL S+LG LSHTYFVGNAPM HMVVPP ETAQVPSLK+FFFKSQVIATNKFNI K
Subjt:  QRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEK

Query:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS
        CEDFVWVTKDEL+EYFPDQAEFFKKMIIS
Subjt:  CEDFVWVTKDELIEYFPDQAEFFKKMIIS

SwissProt top hits

e value

%identity

Alignment

P36528 54S ribosomal protein L17, mitochondrial

6.5e-15

35.19

Show/hide

Query:  QEFKGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPE-KVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHM
        Q+ + K D     +P  RITEAD++ND KSL+R L R LYLL+        DK   W FP   + +  + L   AE+ L  + GD  +T+ V   P+G +
Subjt:  QEFKGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPE-KVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHM

Query:  VVPPIETAQVPSLKQFFFKSQVIATNKFNI-----EKCEDFVWVTKDELIEYFPDQAEFFKK
              TA      +F  KS ++A  KF++     +  EDF W+TK E+ EY P   ++F K
Subjt:  VVPPIETAQVPSLKQFFFKSQVIATNKFNI-----EKCEDFVWVTKDELIEYFPDQAEFFKK

Q5RBU2 39S ribosomal protein L46, mitochondrial

1.5e-14

40.15

Show/hide

Query:  RITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVV---PPIETAQVPSLKQ
        RITEAD+ NDR SL R LDR L +LL     G  D   VW  P+  ++  ETLR  AE  LA++  +     F+GNAP GH        + T      K 
Subjt:  RITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVV---PPIETAQVPSLKQ

Query:  FFFKSQVIATNKFNIEKCEDFVWVTKDELIEY
        FFFK+ ++  +          VWVTKDEL +Y
Subjt:  FFFKSQVIATNKFNIEKCEDFVWVTKDELIEY

Q5RK00 39S ribosomal protein L46, mitochondrial

1.5e-14

37.41

Show/hide

Query:  IDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGH---MVVPPIETA
        + + P  R TEADK NDR SL R LDR L +LL    +G  D   +W  P+  ++  ETLR  AE  LA++  +     F+GNAP GH        I T 
Subjt:  IDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGH---MVVPPIETA

Query:  QVPSLKQFFFKSQVIATNKFNIEKCEDFVWVTKDELIEY
            +K FFFK+ ++  +     K    VW +K+EL +Y
Subjt:  QVPSLKQFFFKSQVIATNKFNIEKCEDFVWVTKDELIEY

Q9EQI8 39S ribosomal protein L46, mitochondrial

2.9e-15

38.13

Show/hide

Query:  IDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGH---MVVPPIETA
        + + P  R TEADK NDR SL R LDR L +LL    +G  D   VW  P+  ++  ETLR  AE  LA++  +     F+GNAP GH        I+T 
Subjt:  IDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGH---MVVPPIETA

Query:  QVPSLKQFFFKSQVIATNKFNIEKCEDFVWVTKDELIEY
            +K FFFK+ ++  +     K    VW +K+EL +Y
Subjt:  QVPSLKQFFFKSQVIATNKFNIEKCEDFVWVTKDELIEY

Q9H2W6 39S ribosomal protein L46, mitochondrial

1.5e-14

40.15

Show/hide

Query:  RITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVV---PPIETAQVPSLKQ
        RITEAD+ NDR SL R LDR L +LL     G  D   VW  P+  ++  ETLR  AE  LA++  +     F+GNAP GH        + T      K 
Subjt:  RITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVV---PPIETAQVPSLKQ

Query:  FFFKSQVIATNKFNIEKCEDFVWVTKDELIEY
        FFFK+ ++  +          VWVTKDEL +Y
Subjt:  FFFKSQVIATNKFNIEKCEDFVWVTKDELIEY

Arabidopsis top hits

e value

%identity

Alignment

AT1G14620.1 decoy

4.3e-78

64.55

Show/hide

Query:  LVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYL
        L  +RGF T+S+KIVASVLFERL VVIPK DP VYAFQEFK                       KG+YQ+DYVPAPRITEADK NDRKSL RALD++LYL
Subjt:  LVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYL

Query:  LLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPI-ETAQVPSLKQFFFKSQVIATNKFNIEKCEDFVWVTK
        L++G   GA   KPVWHFPEKVY++E TLRKCAESAL S++GDL+HTYFVGNAPM HM + P  E   +PS K+FFFK  V+A +K++I  CEDFVWVTK
Subjt:  LLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPI-ETAQVPSLKQFFFKSQVIATNKFNIEKCEDFVWVTK

Query:  DELIEYFPDQAEFFKKMIIS
        DEL+E+FP+QAEFF KMIIS
Subjt:  DELIEYFPDQAEFFKKMIIS

AT1G14620.2 decoy

2.1e-56

58.51

Show/hide

Query:  LVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYL
        L  +RGF T+S+KIVASVLFERL VVIPK DP VYAFQEFK                       KG+YQ+DYVPAPRITEADK NDRKSL RALD++LYL
Subjt:  LVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFK----------------------GKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYL

Query:  LLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNI
        L++G   GA   KPVWHFPEKVY++E TLRKCAESAL S++GDL+HTYFVGNAPM HM + P  T ++P L  +    Q+  ++   I
Subjt:  LLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAGAGATTGTTTAGCATAGCCGGTCAGCTGGTGAAGAAGCGAGGATTTTCGACGAATTCCGAGAAAATTGTGGCGTCTGTACTGTTCGAGAGGCTGCCAGTCGTGAT
TCCGAAGGTTGATCCTGTTGTCTATGCATTTCAGGAGTTCAAGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACGGAAGCTGACAAAACGAATG
ATAGGAAGTCACTGCAGAGAGCACTTGACAGAAGACTCTATCTTCTTCTCTATGGTACCTCTATTGGGGCACCTGATAAGAAACCTGTCTGGCACTTCCCAGAAAAAGTA
TACGAGACCGAGGAGACACTTCGTAAATGTGCAGAGTCTGCCTTAGCGTCCATCCTTGGAGATCTTTCTCATACGTATTTTGTCGGAAATGCTCCAATGGGCCATATGGT
TGTACCGCCTATAGAAACTGCACAAGTTCCATCTTTAAAGCAGTTCTTTTTTAAGTCTCAAGTGATTGCAACCAATAAATTCAATATTGAGAAATGTGAAGATTTTGTGT
GGGTTACAAAGGATGAATTGATTGAGTATTTTCCTGATCAAGCTGAATTTTTCAAGAAGATGATCATCAGTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MQRLFSIAGQLVKKRGFSTNSEKIVASVLFERLPVVIPKVDPVVYAFQEFKGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKV
YETEETLRKCAESALASILGDLSHTYFVGNAPMGHMVVPPIETAQVPSLKQFFFKSQVIATNKFNIEKCEDFVWVTKDELIEYFPDQAEFFKKMIIS

Tan0022177 (gene) of Snake gourd v1 genome