; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0022221 (gene) of Snake gourd v1 genome

Gene IDTan0022221
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionYlmG homolog protein 1-2, chloroplastic
Genome locationLG04:88031891..88032217
RNA-Seq ExpressionTan0022221
SyntenyTan0022221
Gene Ontology termsGO:0010020 - chloroplast fission (biological process)
GO:0090143 - nucleoid organization (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR003425 - CCB3/YggT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3442338.1 hypothetical protein FNV43_RR16254 [Rhamnella rubrinervis]1.7e-3595Show/hide
Query:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNI WDR+PLS IRDLCDPYLNLFRNIIPPIFDTLD SPLLAFAV
Subjt:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

TYG45319.1 hypothetical protein ES288_D11G164100v1 [Gossypium darwinii]1.7e-3595Show/hide
Query:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNI WDR+PLS IRDLCDPYLNLFRNIIPPIFDTLD SPLLAFAV
Subjt:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

XP_012084994.1 ylmG homolog protein 1-2, chloroplastic [Jatropha curcas]1.7e-3595Show/hide
Query:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNI WDR+PLS IRDLCDPYLNLFRNIIPPIFDTLD SPLLAFAV
Subjt:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

XP_020095966.1 ylmG homolog protein 1-2, chloroplastic-like [Ananas comosus]5.7e-3676.19Show/hide
Query:  PKSLPWARYVPIGRLAVFR------SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPL
        P S P   + P+G    F       SGYLNTPLTVVAAG+AKWLDIYSGVLMVRVLLSWFPNI WDR+PLS IRDLCDPYLNLFRNIIPP+FDTLD SPL
Subjt:  PKSLPWARYVPIGRLAVFR------SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPL

Query:  LAFAV
        LAFAV
Subjt:  LAFAV

XP_021663604.1 LOW QUALITY PROTEIN: ylmG homolog protein 1-2, chloroplastic-like [Hevea brasiliensis]1.3e-3595Show/hide
Query:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNI WDR+PLS IRDLCDPYLNLFRNIIPPIFDTLD SPLLAFAV
Subjt:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

TrEMBL top hitse value%identityAlignment
A0A0D2PA03 Uncharacterized protein8.1e-3695Show/hide
Query:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNI WDR+PLS IRDLCDPYLNLFRNIIPPIFDTLD SPLLAFAV
Subjt:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

A0A2P5Y6R8 Uncharacterized protein8.1e-3695Show/hide
Query:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNI WDR+PLS IRDLCDPYLNLFRNIIPPIFDTLD SPLLAFAV
Subjt:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

A0A6A1WFW9 Uncharacterized protein8.1e-3695Show/hide
Query:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNI WDR+PLS IRDLCDPYLNLFRNIIPPIFDTLD SPLLAFAV
Subjt:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

A0A6A3BBW9 Uncharacterized protein8.1e-3695Show/hide
Query:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNI WDR+PLS IRDLCDPYLNLFRNIIPPIFDTLD SPLLAFAV
Subjt:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

A0A6P5FI22 ylmG homolog protein 1-2, chloroplastic-like2.8e-3676.19Show/hide
Query:  PKSLPWARYVPIGRLAVFR------SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPL
        P S P   + P+G    F       SGYLNTPLTVVAAG+AKWLDIYSGVLMVRVLLSWFPNI WDR+PLS IRDLCDPYLNLFRNIIPP+FDTLD SPL
Subjt:  PKSLPWARYVPIGRLAVFR------SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPL

Query:  LAFAV
        LAFAV
Subjt:  LAFAV

SwissProt top hitse value%identityAlignment
O78424 Uncharacterized protein ycf199.6e-1037.33Show/hide
Query:  LNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAF
        ++   T++ +    +L IY  +L++RV L+WFPN+ W  +P   +  + DPYL +FR I+PP+   +D SP+L F
Subjt:  LNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAF

P51353 Uncharacterized protein ycf195.3e-0836.23Show/hide
Query:  LTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLL
        L ++   +A + +IY  ++++++ L+WFP + W  +P   +  + DPYL LFR  IPP+F  +D SP+L
Subjt:  LTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLL

Q9C595 YlmG homolog protein 2, chloroplastic1.5e-1049.3Show/hide
Query:  VVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        VVA GL  +L+IY+ +L+VR++L+WFP+       ++ +  LCDPYLN+FR  IPP+   LD SP+LAF V
Subjt:  VVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

Q9SRS3 YlmG homolog protein 1-1, chloroplastic4.6e-3689.87Show/hide
Query:  GYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        GYLNTPLTVVA G+ KWLDIYSGVLMVRVLLSWFPNI W+R+PLS IRDLCDPYLNLFRNIIPPIFDTLD SPLLAFAV
Subjt:  GYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

Q9SUE0 YlmG homolog protein 1-2, chloroplastic1.4e-3791.25Show/hide
Query:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        +GYLNTPLTVVAAGL+KWLDIYSGVLMVRVLLSWFPNI WDR+PLS IRDLCDPYLNLFRNIIPP+FDTLD SPLLAFAV
Subjt:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

Arabidopsis top hitse value%identityAlignment
AT3G07430.1 YGGT family protein3.2e-3789.87Show/hide
Query:  GYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        GYLNTPLTVVA G+ KWLDIYSGVLMVRVLLSWFPNI W+R+PLS IRDLCDPYLNLFRNIIPPIFDTLD SPLLAFAV
Subjt:  GYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

AT4G27990.1 YGGT family protein1.0e-3891.25Show/hide
Query:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        +GYLNTPLTVVAAGL+KWLDIYSGVLMVRVLLSWFPNI WDR+PLS IRDLCDPYLNLFRNIIPP+FDTLD SPLLAFAV
Subjt:  SGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

AT5G21920.1 YGGT family protein1.1e-1149.3Show/hide
Query:  VVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        VVA GL  +L+IY+ +L+VR++L+WFP+       ++ +  LCDPYLN+FR  IPP+   LD SP+LAF V
Subjt:  VVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV

AT5G21920.2 YGGT family protein1.1e-1149.3Show/hide
Query:  VVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV
        VVA GL  +L+IY+ +L+VR++L+WFP+       ++ +  LCDPYLN+FR  IPP+   LD SP+LAF V
Subjt:  VVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCTAAATCCTTGCCCTGGGCTCGGTACGTTCCAATCGGCCGGCTCGCTGTTTTTCGCAGCGGATATCTCAACACGCCTTTGACGGTGGTGGCTGCAGGGTTGGC
CAAGTGGCTTGATATTTACAGTGGGGTTTTGATGGTTAGGGTTTTGCTGAGTTGGTTCCCCAACATCGCTTGGGACCGGAAGCCACTCTCTGTAATTCGTGATCTCTGTG
ACCCGTACTTGAACCTGTTCCGGAATATAATTCCTCCAATATTCGATACCCTGGACTTTAGCCCGCTTCTGGCTTTTGCGGTTCCGGCACACTCGGGTCAATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCTAAATCCTTGCCCTGGGCTCGGTACGTTCCAATCGGCCGGCTCGCTGTTTTTCGCAGCGGATATCTCAACACGCCTTTGACGGTGGTGGCTGCAGGGTTGGC
CAAGTGGCTTGATATTTACAGTGGGGTTTTGATGGTTAGGGTTTTGCTGAGTTGGTTCCCCAACATCGCTTGGGACCGGAAGCCACTCTCTGTAATTCGTGATCTCTGTG
ACCCGTACTTGAACCTGTTCCGGAATATAATTCCTCCAATATTCGATACCCTGGACTTTAGCCCGCTTCTGGCTTTTGCGGTTCCGGCACACTCGGGTCAATTCTGA
Protein sequenceShow/hide protein sequence
MSPKSLPWARYVPIGRLAVFRSGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIAWDRKPLSVIRDLCDPYLNLFRNIIPPIFDTLDFSPLLAFAVPAHSGQF