; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0022228 (gene) of Snake gourd v1 genome

Gene IDTan0022228
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG05:75463232..75464150
RNA-Seq ExpressionTan0022228
SyntenyTan0022228
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137160.1 chlorophyll a-b binding protein P4, chloroplastic-like [Momordica charantia]6.6e-13694.82Show/hide
Query:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MAT MTQAS AVFRPCASRSRFLSGSS KFNR LSVKPT S +P  FKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHI+DPWHNTI+QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG

XP_022949090.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata]5.6e-13594.42Show/hide
Query:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        M+ VM QAS AVFRP ASRSRFL GSS KFNR LSVKPTTS VPSSFKVEAKKGEWLPGLPSPAYLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS+GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHI+DPWHNTI+QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG

XP_022998805.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita maxima]7.3e-13594.42Show/hide
Query:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        M+ VM QAS AVFRP ASRSRFLSGSS KFNR LSVKPTTS VPSSFKVEAKKGEWLPGLPSPAYLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHI+DPWHNT++QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG

XP_023524863.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita pepo subsp. pepo]1.9e-13594.42Show/hide
Query:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        M+ VM QAS AVFRP ASRSRFLSGSS KFNR LSVKPTTS VPSSFKVEAKKGEWLPGLPSP YLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS+GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHI+DPWHNTI+QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG

XP_038894825.1 chlorophyll a-b binding protein P4, chloroplastic-like [Benincasa hispida]3.0e-13695.22Show/hide
Query:  MATVMTQASA-VFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVMTQASA VFRPC  RSRFLS +S KFNR LSVKPTTS VP+SFKVEAKKGEWLPGLPSPAYLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQASA-VFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHI+DPWHNTI+QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG

TrEMBL top hitse value%identityAlignment
A0A0A0LTE5 Chlorophyll a-b binding protein, chloroplastic3.0e-13492.4Show/hide
Query:  MATVMTQASA-VFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATV+TQASA VFRPCASRSRFLSGSS KFNR LSVKPTTS +P++FKVEAKKGEWLPGLPSP YLDGSL GDNGFDPLGLAEDPENLRWY QAELVNGR
Subjt:  MATVMTQASA-VFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGM+LPEV T++GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLR
        +EKEIANGRLAMLAFLGFIVQHNVTGKGPFDNF+QHI+DPWHNTI+QTLR
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLR

A0A2C9VP65 Chlorophyll a-b binding protein, chloroplastic3.2e-12887.65Show/hide
Query:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATV+TQAS AVFRPCASRSRFL+GSS K NR +S+KP  S   +SFKVEAKKGEWLPGLPSPAYL+GSL GDNGFDPLGLAEDPENL+WY+QAELVNGR
Subjt:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFT  G+INVP+WYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN+VGYPGGIFNPLNF PTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG
        KEKE+ANGRLAMLAFLGF+VQHNVTGKGPFDN LQH++DPWHNTI+QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG

A0A6J1C5V9 Chlorophyll a-b binding protein, chloroplastic3.2e-13694.82Show/hide
Query:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MAT MTQAS AVFRPCASRSRFLSGSS KFNR LSVKPT S +P  FKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHI+DPWHNTI+QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG

A0A6J1GBT1 Chlorophyll a-b binding protein, chloroplastic2.7e-13594.42Show/hide
Query:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        M+ VM QAS AVFRP ASRSRFL GSS KFNR LSVKPTTS VPSSFKVEAKKGEWLPGLPSPAYLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS+GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHI+DPWHNTI+QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG

A0A6J1KDI3 Chlorophyll a-b binding protein, chloroplastic3.5e-13594.42Show/hide
Query:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        M+ VM QAS AVFRP ASRSRFLSGSS KFNR LSVKPTTS VPSSFKVEAKKGEWLPGLPSPAYLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHI+DPWHNT++QTLRG
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic2.1e-6048.51Show/hide
Query:  ASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT
        A+++ FL G   + ++ ++   + S   S+   +  +  W PG   P +LDGSL GD GFDPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE  T
Subjt:  ASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT

Query:  SFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRL
          G++N P WY AG+ EYF  ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   DVGYPGG+ F+PL +         E + KEI NGRL
Subjt:  SFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRL

Query:  AMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTI
        AMLA +G   QH  TG GP DN   H+ DP H TI
Subjt:  AMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTI

P27521 Chlorophyll a-b binding protein 4, chloroplastic3.4e-11982.73Show/hide
Query:  MATVMTQASA-VFRPCASRSRFLSGSSRKFNRTLSVKPT-TSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNG
        MATV T ASA +FRPC S+ RFL+GSS + NR LS     +S   SSFKVEAKKGEWLPGL SP YL GSLAGDNGFDPLGLAEDPENL+W+VQAELVNG
Subjt:  MATVMTQASA-VFRPCASRSRFLSGSSRKFNRTLSVKPT-TSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNG

Query:  RWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
        RWAMLGVAGMLLPEVFT  GIINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PT E
Subjt:  RWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQT
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+N LQH++DPWHNTI+QT
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQT

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)2.2e-8667.4Show/hide
Query:  KFNRTLSVKPTTSPVPSSFKVEA---KKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPK
        +F   +   P  S  P S + +     KG WLPGL SPAYLDGSL GDNGFDPL LAEDPE+LRW+VQA++VNGRWAMLGVAGML+PEV T  G++N P+
Subjt:  KFNRTLSVKPTTSPVPSSFKVEA---KKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPK

Query:  WYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNV
        W    GK  YFASSST   +  +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP++ GYPG +FNPLNF P LE KEKE+ANGRLAMLAFLGF+VQHNV
Subjt:  WYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNV

Query:  TGKGPFDNFLQHITDPWHNTILQTLRG
         GKGPF+N  QH+ DPWHNTI+QT+ G
Subjt:  TGKGPFDNFLQHITDPWHNTILQTLRG

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic7.4e-12284.06Show/hide
Query:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATV TQAS A+F PC  +SRFL GSS K NR ++ +P      +SFKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVMTQAS-AVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PTLEA
Subjt:  WAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDN LQHI+DPWHNTI+QTL G
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic1.6e-6048.41Show/hide
Query:  MATVMTQASAVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGE--WLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNG
        MA+ +  +SA+     S   FL G   +  + L+V   + P  S   V A      W PG   P +LDGSL GD GFDPLGL+ DP++L+W VQAE+V+ 
Subjt:  MATVMTQASAVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGE--WLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNG

Query:  RWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF----
        RWAMLG AG+ +PE  T  GI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   DVGYPGG+ F+PL +    
Subjt:  RWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF----

Query:  -EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTI
             E + KEI NGRLAMLA +G   QH  TG GP DN   H+ DP H TI
Subjt:  -EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTI

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 62.0e-5349.22Show/hide
Query:  WLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIR
        W PG   P +LDGSL GD GFDPLGL  DP+ L+W+ QAEL++ RWAML V G+++PE     G I    WYDAG  EYFA S+TLFV + +L  + E R
Subjt:  WLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIR

Query:  RWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF------EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWH
        RW D+  PGSV+ +P +     P  DVGYPGG++           EP +  + KEI NGRLAMLAFLGF  Q   T + P +N + H+ DP H
Subjt:  RWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF------EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWH

AT1G45474.1 photosystem I light harvesting complex gene 52.2e-5749.34Show/hide
Query:  RTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGK
        R  SVK     +  +  VE  +  WLPGL  P YLDG+LAGD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG+L  ++  + GI N+P WY+AG 
Subjt:  RTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGK

Query:  AEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFLGFIVQH
         ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL     ++     K KEI NGRLAM+A LGF VQ 
Subjt:  AEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFLGFIVQH

Query:  NVTGKGPFDNFLQHITDPWHNTILQTL
        +VT  GP DN ++H+++PWH TI+QTL
Subjt:  NVTGKGPFDNFLQHITDPWHNTILQTL

AT1G45474.2 photosystem I light harvesting complex gene 52.2e-5749.34Show/hide
Query:  RTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGK
        R  SVK     +  +  VE  +  WLPGL  P YLDG+LAGD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG+L  ++  + GI N+P WY+AG 
Subjt:  RTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGK

Query:  AEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFLGFIVQH
         ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL     ++     K KEI NGRLAM+A LGF VQ 
Subjt:  AEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFLGFIVQH

Query:  NVTGKGPFDNFLQHITDPWHNTILQTL
        +VT  GP DN ++H+++PWH TI+QTL
Subjt:  NVTGKGPFDNFLQHITDPWHNTILQTL

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A42.4e-12082.73Show/hide
Query:  MATVMTQASA-VFRPCASRSRFLSGSSRKFNRTLSVKPT-TSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNG
        MATV T ASA +FRPC S+ RFL+GSS + NR LS     +S   SSFKVEAKKGEWLPGL SP YL GSLAGDNGFDPLGLAEDPENL+W+VQAELVNG
Subjt:  MATVMTQASA-VFRPCASRSRFLSGSSRKFNRTLSVKPT-TSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNG

Query:  RWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
        RWAMLGVAGMLLPEVFT  GIINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PT E
Subjt:  RWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQT
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+N LQH++DPWHNTI+QT
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQT

AT3G61470.1 photosystem I light harvesting complex gene 21.2e-6148.41Show/hide
Query:  MATVMTQASAVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGE--WLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNG
        MA+ +  +SA+     S   FL G   +  + L+V   + P  S   V A      W PG   P +LDGSL GD GFDPLGL+ DP++L+W VQAE+V+ 
Subjt:  MATVMTQASAVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGE--WLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNG

Query:  RWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF----
        RWAMLG AG+ +PE  T  GI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   DVGYPGG+ F+PL +    
Subjt:  RWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF----

Query:  -EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTI
             E + KEI NGRLAMLA +G   QH  TG GP DN   H+ DP H TI
Subjt:  -EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTGTCATGACCCAGGCTTCGGCCGTCTTCCGACCATGTGCGTCGAGATCGAGGTTCCTTTCGGGGTCGTCAAGAAAGTTTAACAGAACTTTGTCTGTTAAGCC
AACAACTTCTCCAGTTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAGGGAGAGTGGCTACCAGGTTTGCCATCACCAGCTTACCTTGATGGCAGTCTAGCAGGTGACAATG
GATTTGATCCTCTGGGACTTGCAGAGGACCCTGAAAACTTGAGGTGGTATGTGCAAGCAGAGCTAGTGAATGGTCGATGGGCGATGCTCGGAGTTGCAGGTATGCTATTG
CCTGAAGTCTTCACAAGTTTTGGAATCATCAACGTACCGAAATGGTACGATGCTGGGAAAGCCGAATATTTCGCATCGTCGTCGACTCTCTTTGTGATTGAGTTCATTCT
GTTTCATTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATACAGCTTGCCACCAAATGATGTTGGATATC
CAGGGGGAATTTTCAATCCACTCAACTTTGAGCCAACTCTTGAGGCCAAGGAAAAGGAGATTGCTAATGGAAGATTGGCAATGTTGGCATTCTTGGGATTCATTGTTCAA
CACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTACAGATCCATGGCACAACACTATTCTCCAAACACTAAGGGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTGTCATGACCCAGGCTTCGGCCGTCTTCCGACCATGTGCGTCGAGATCGAGGTTCCTTTCGGGGTCGTCAAGAAAGTTTAACAGAACTTTGTCTGTTAAGCC
AACAACTTCTCCAGTTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAGGGAGAGTGGCTACCAGGTTTGCCATCACCAGCTTACCTTGATGGCAGTCTAGCAGGTGACAATG
GATTTGATCCTCTGGGACTTGCAGAGGACCCTGAAAACTTGAGGTGGTATGTGCAAGCAGAGCTAGTGAATGGTCGATGGGCGATGCTCGGAGTTGCAGGTATGCTATTG
CCTGAAGTCTTCACAAGTTTTGGAATCATCAACGTACCGAAATGGTACGATGCTGGGAAAGCCGAATATTTCGCATCGTCGTCGACTCTCTTTGTGATTGAGTTCATTCT
GTTTCATTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATACAGCTTGCCACCAAATGATGTTGGATATC
CAGGGGGAATTTTCAATCCACTCAACTTTGAGCCAACTCTTGAGGCCAAGGAAAAGGAGATTGCTAATGGAAGATTGGCAATGTTGGCATTCTTGGGATTCATTGTTCAA
CACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTACAGATCCATGGCACAACACTATTCTCCAAACACTAAGGGGATAG
Protein sequenceShow/hide protein sequence
MATVMTQASAVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLL
PEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQ
HNVTGKGPFDNFLQHITDPWHNTILQTLRG