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Tan0022230 (gene) of Snake gourd v1 genome

Gene IDTan0022230
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR2
Genome locationLG08:26221449..26221957
RNA-Seq ExpressionTan0022230
SyntenyTan0022230
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052125.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]4.4e-3170.27Show/hide
Query:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRREVESLFGLFYR
        MS+ H+SD +  LE   K  E GDR  E   GEAL+ A D  GESCRTPTSLRHRIP A+SCPTTPRKQ+V  KRK SDQ+FFEATGR EVESLFGLFYR
Subjt:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRREVESLFGLFYR

Query:  VSSAKRRCTSI
        VSS+KRRCTS+
Subjt:  VSSAKRRCTSI

KAE8652786.1 hypothetical protein Csa_022878 [Cucumis sativus]1.2e-2065.93Show/hide
Query:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRREV
        MS+FH+SD Q  LE   + PE GDR  E   GEAL+ A    GESCRTPTS +HRIP A+SCPTTPRKQ+VV KRKFSDQ+FFEATGR E+
Subjt:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRREV

KAG6583595.1 hypothetical protein SDJN03_19527, partial [Cucurbita argyrosperma subsp. sororia]8.0e-3374.77Show/hide
Query:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRREVESLFGLFYR
        MS+FH+SDHQ  ++   KPPEEGDR KE  GG    EA D GGESCRTPTSLRHRIP ARS PTTPRK+KV SKRKFSDQ+FFE TGR EVESLF LFYR
Subjt:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRREVESLFGLFYR

Query:  VSSAKRRCTSI
        VSSAKRR T+I
Subjt:  VSSAKRRCTSI

KAG6586014.1 hypothetical protein SDJN03_18747, partial [Cucurbita argyrosperma subsp. sororia]3.1e-3779.28Show/hide
Query:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRREVESLFGLFYR
        MSEF  SDHQ SLE  +KP EE DR KE  GGEAL    DGGGESCRTP+SL+HRIPAARSCPTTPRK+KVVSKRKFSDQ+FFE+T R EVESLFGLFYR
Subjt:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRREVESLFGLFYR

Query:  VSSAKRRCTSI
        VSS KRRCTSI
Subjt:  VSSAKRRCTSI

KAG7019295.1 hypothetical protein SDJN02_18255, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-3272.97Show/hide
Query:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRREVESLFGLFYR
        MS+FH+SDHQ  ++   KPPEEGDR KE  GG    EA D  GESCRTPTSLRHRIP ARS PTTPRK+K+ SKRKFSDQ+FFE TGR EVESLF LFYR
Subjt:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRREVESLFGLFYR

Query:  VSSAKRRCTSI
        VSSAKRR T+I
Subjt:  VSSAKRRCTSI

TrEMBL top hitse value%identityAlignment
A0A0A0LV74 Uncharacterized protein1.3e-2066.67Show/hide
Query:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRRE
        MS+FH+SD Q  LE   + PE GDR  E   GEAL+ A    GESCRTPTS +HRIP A+SCPTTPRKQ+VV KRKFSDQ+FFEATGR E
Subjt:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRRE

A0A251NNT8 Uncharacterized protein1.7e-0944.35Show/hide
Query:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRK--QKVVSKRKFSDQNFFEATGRREVESLFGLF
        +S FH  DHQ   +  K   E+ D  + ++  E         G+ CRTPTS  H+IP  +SCPTTPRK  Q  V KRK +  +FFE TGR EVES F   
Subjt:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRK--QKVVSKRKFSDQNFFEATGRREVESLFGLF

Query:  YRVSS--AKRRCTSI
        +   S   K+RCTSI
Subjt:  YRVSS--AKRRCTSI

A0A5D3BHE9 Cyclin-dependent protein kinase inhibitor SMR22.1e-3170.27Show/hide
Query:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRREVESLFGLFYR
        MS+ H+SD +  LE   K  E GDR  E   GEAL+ A D  GESCRTPTSLRHRIP A+SCPTTPRKQ+V  KRK SDQ+FFEATGR EVESLFGLFYR
Subjt:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRREVESLFGLFYR

Query:  VSSAKRRCTSI
        VSS+KRRCTS+
Subjt:  VSSAKRRCTSI

M5W3L3 Uncharacterized protein (Fragment)1.7e-0944.35Show/hide
Query:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRK--QKVVSKRKFSDQNFFEATGRREVESLFGLF
        +S FH  DHQ   +  K   E+ D  + ++  E         G+ CRTPTS  H+IP  +SCPTTPRK  Q  V KRK +  +FFE TGR EVES F   
Subjt:  MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRK--QKVVSKRKFSDQNFFEATGRREVESLFGLF

Query:  YRVSS--AKRRCTSI
        +   S   K+RCTSI
Subjt:  YRVSS--AKRRCTSI

V4RSW1 Uncharacterized protein2.3e-0946.08Show/hide
Query:  KKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVS--KRKFSDQNFFEATGRREVESLF---GLFYRVSS--AKRRCT
        K  P    + +E  G E    + D   E C+TPTS  H+IP  +SCPTTPRK+  VS  KRK  +  FFEATGR EVES F      +RV S   K+RC 
Subjt:  KKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVS--KRKFSDQNFFEATGRREVESLF---GLFYRVSS--AKRRCT

Query:  SI
        S+
Subjt:  SI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein3.7e-0436.89Show/hide
Query:  MSEFHES-DHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQ----KVVSKRKFS-DQNFFEAT--GRREVE
        MS+  E+ + + ++E K +  EE D        E L        ES  TPTS  H+IP   +CP  PRK+     +  K + S D  FFEAT  G +EVE
Subjt:  MSEFHES-DHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQ----KVVSKRKFS-DQNFFEAT--GRREVE

Query:  SLF
        +LF
Subjt:  SLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAATTTCACGAATCCGATCACCAAAATTCATTAGAAAATAAAAAAAAGCCACCGGAAGAAGGTGATCGGATCAAGGAGGTAGTCGGTGGAGAAGCCCTTCAGGA
GGCGGCGGATGGTGGCGGAGAGAGCTGTCGAACTCCGACATCTCTCCGACATCGAATTCCAGCCGCACGAAGCTGCCCGACCACGCCGAGAAAGCAGAAGGTTGTGAGCA
AGAGGAAGTTTTCAGACCAGAACTTCTTTGAGGCCACCGGAAGGAGAGAGGTAGAGTCTTTGTTTGGCTTATTTTATAGGGTTTCTTCCGCTAAAAGAAGATGCACTAGT
ATATAA
mRNA sequenceShow/hide mRNA sequence
TCTAAATCTTCCTTAACAAGAATTGATCAAAACCAAAAAAAAAAAAGCCTATAAATATTAACTCTCTCTCTCTCTTCCTCTAAGATTATTCAAAAACTCAGCTCTCTTCT
CTCTCTCTCTCCAAACCCATGTCTGAATTTCACGAATCCGATCACCAAAATTCATTAGAAAATAAAAAAAAGCCACCGGAAGAAGGTGATCGGATCAAGGAGGTAGTCGG
TGGAGAAGCCCTTCAGGAGGCGGCGGATGGTGGCGGAGAGAGCTGTCGAACTCCGACATCTCTCCGACATCGAATTCCAGCCGCACGAAGCTGCCCGACCACGCCGAGAA
AGCAGAAGGTTGTGAGCAAGAGGAAGTTTTCAGACCAGAACTTCTTTGAGGCCACCGGAAGGAGAGAGGTAGAGTCTTTGTTTGGCTTATTTTATAGGGTTTCTTCCGCT
AAAAGAAGATGCACTAGTATATAAAACCCGACGTGTTTGTATGTATATATGTATACACCGTTAAATTAG
Protein sequenceShow/hide protein sequence
MSEFHESDHQNSLENKKKPPEEGDRIKEVVGGEALQEAADGGGESCRTPTSLRHRIPAARSCPTTPRKQKVVSKRKFSDQNFFEATGRREVESLFGLFYRVSSAKRRCTS
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