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Tan0022234 (gene) of Snake gourd v1 genome

Gene IDTan0022234
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:38498961..38499296
RNA-Seq ExpressionTan0022234
SyntenyTan0022234
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646857.1 hypothetical protein Csa_020829, partial [Cucumis sativus]1.6e-1755.17Show/hide
Query:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGN-PPGREVNDGVENEEEDDNVTLLAGHNPRRGRGVGRG----RRAGRELLPPRR
        M++   +  EI E R  EAQ GA+ RL QVI+ LTDR+DRIEVA+ N   G+ +N+GVENEE++DN TLLA  N R  R +G+G    RR GR++LP RR
Subjt:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGN-PPGREVNDGVENEEEDDNVTLLAGHNPRRGRGVGRG----RRAGRELLPPRR

Query:  VEREYQYEREEREAGV
        VEREYQ ER E E G+
Subjt:  VEREYQYEREEREAGV

XP_022925325.1 uncharacterized protein LOC111432615 [Cucurbita moschata]4.0e-2467.62Show/hide
Query:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGNPPGREV--NDGVENEEEDDNVTLLAGHNPRRGRGVGRGRRAGRELLPPRRVER
        M++D G+G EI E RWREAQ+G +TRLNQVISTLTDRM+RI++A+GN  GREV  N+GVEN EEDDNVTLLAGH+PR GR VGRGR  GR     RR E 
Subjt:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGNPPGREV--NDGVENEEEDDNVTLLAGHNPRRGRGVGRGRRAGRELLPPRRVER

Query:  EYQYE
          QYE
Subjt:  EYQYE

XP_022929948.1 uncharacterized protein LOC111436410 [Cucurbita moschata]8.3e-2273.75Show/hide
Query:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGNPPGREV--NDGVENEEEDDNVTLLAGHNPRRGR
        M++DGG+G EI E RWREAQ+G +T LNQVISTLTDRM+RIE+A+GN  GREV  N+GVEN EEDDNVTLLAGH+PR GR
Subjt:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGNPPGREV--NDGVENEEEDDNVTLLAGHNPRRGR

XP_023534142.1 uncharacterized protein LOC111795765 [Cucurbita pepo subsp. pepo]2.1e-3371.79Show/hide
Query:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGNPPGREV--NDGVENEEEDDNVTLLAGHNPRRGRGVGRG----RRAGRELLPPR
        M++DGG+G EI E RWREAQ+G +TRLNQVISTLTDRM+RIE+A+GN  GREV  N+GVEN EEDDNVTLLAGH+PR GR VGRG    RR GRE+L P+
Subjt:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGNPPGREV--NDGVENEEEDDNVTLLAGHNPRRGRGVGRG----RRAGRELLPPR

Query:  RVEREYQYEREEREAGV
        R+EREYQYER E E GV
Subjt:  RVEREYQYEREEREAGV

XP_038888883.1 uncharacterized protein LOC120078660 [Benincasa hispida]3.6e-1752.59Show/hide
Query:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGNPPGREV--NDGVENEEEDDNVTLLAGHNPRRGRGV---GRGRRAGRELLPPRR
        MS+  G   E  E R+REAQ+G +TRL +V+ +L DR++R+EVA+ NP   E+  N+  +NEE+DDN TLL G N  RG GV   GRGRR  R +L PR 
Subjt:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGNPPGREV--NDGVENEEEDDNVTLLAGHNPRRGRGV---GRGRRAGRELLPPRR

Query:  VEREYQYEREEREAGV
        VEREYQ ER E E G+
Subjt:  VEREYQYEREEREAGV

TrEMBL top hitse value%identityAlignment
A0A0A0KC00 Uncharacterized protein8.1e-1549.55Show/hide
Query:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGN-PPGREVNDGVENEEEDDNVTLLAGHNPRRGRGVGRGRRAGRE----LLPPRR
        M++   +  +I E +  EAQ GA+ RL QVI+ LT+R+DR+EVA+ N   G  +N+GVENEE++DN T LAG NPR  R +G+GRR  R     +LP RR
Subjt:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGN-PPGREVNDGVENEEEDDNVTLLAGHNPRRGRGVGRGRRAGRE----LLPPRR

Query:  VEREYQYEREE
        VE E+Q ER +
Subjt:  VEREYQYEREE

A0A0A0L0S3 Uncharacterized protein6.6e-0950.63Show/hide
Query:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGN-PPGREVNDGVENEEEDDNVTLLAGHNPRRGR
        M++   +  EI E R  EAQ GA+ RL QVI+ LTDR+DR+ VA+ N   G  +N+GVENE+++DN TLLA  NP   R
Subjt:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGN-PPGREVNDGVENEEEDDNVTLLAGHNPRRGR

A0A5A7UDQ9 Uncharacterized protein4.5e-0549.3Show/hide
Query:  IEVAIGN-PPGREVNDGVENEEEDDNVTLLAGHNPRRGRGVG----RGRRAGRELLPPRRVEREYQYEREE
        ++VA+ N   G  +N+GVEN+E++DN T+L G NP+  R +G    R RR G  +LP RRVEREY+ ER E
Subjt:  IEVAIGN-PPGREVNDGVENEEEDDNVTLLAGHNPRRGRGVG----RGRRAGRELLPPRRVEREYQYEREE

A0A6J1EHL9 uncharacterized protein LOC1114326151.9e-2467.62Show/hide
Query:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGNPPGREV--NDGVENEEEDDNVTLLAGHNPRRGRGVGRGRRAGRELLPPRRVER
        M++D G+G EI E RWREAQ+G +TRLNQVISTLTDRM+RI++A+GN  GREV  N+GVEN EEDDNVTLLAGH+PR GR VGRGR  GR     RR E 
Subjt:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGNPPGREV--NDGVENEEEDDNVTLLAGHNPRRGRGVGRGRRAGRELLPPRRVER

Query:  EYQYE
          QYE
Subjt:  EYQYE

A0A6J1ETN1 uncharacterized protein LOC1114364104.0e-2273.75Show/hide
Query:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGNPPGREV--NDGVENEEEDDNVTLLAGHNPRRGR
        M++DGG+G EI E RWREAQ+G +T LNQVISTLTDRM+RIE+A+GN  GREV  N+GVEN EEDDNVTLLAGH+PR GR
Subjt:  MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGNPPGREV--NDGVENEEEDDNVTLLAGHNPRRGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCGTGACGGGGGAAGTGGATGGGAGATTGGCGAAGTTAGGTGGAGAGAGGCACAAATTGGGGCTATGACTCGTTTGAACCAAGTAATTAGTACCTTGACAGATCG
GATGGATCGAATTGAAGTAGCTATAGGAAATCCTCCAGGTAGGGAAGTTAATGACGGAGTTGAAAATGAAGAAGAAGATGACAATGTAACCCTTTTAGCCGGACACAATC
CAAGGAGAGGGAGAGGTGTAGGTCGGGGAAGAAGAGCAGGAAGAGAATTGTTACCACCGAGAAGGGTTGAGAGGGAGTACCAATATGAGAGGGAAGAGAGAGAAGCAGGG
GTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCGTGACGGGGGAAGTGGATGGGAGATTGGCGAAGTTAGGTGGAGAGAGGCACAAATTGGGGCTATGACTCGTTTGAACCAAGTAATTAGTACCTTGACAGATCG
GATGGATCGAATTGAAGTAGCTATAGGAAATCCTCCAGGTAGGGAAGTTAATGACGGAGTTGAAAATGAAGAAGAAGATGACAATGTAACCCTTTTAGCCGGACACAATC
CAAGGAGAGGGAGAGGTGTAGGTCGGGGAAGAAGAGCAGGAAGAGAATTGTTACCACCGAGAAGGGTTGAGAGGGAGTACCAATATGAGAGGGAAGAGAGAGAAGCAGGG
GTGTGA
Protein sequenceShow/hide protein sequence
MSRDGGSGWEIGEVRWREAQIGAMTRLNQVISTLTDRMDRIEVAIGNPPGREVNDGVENEEEDDNVTLLAGHNPRRGRGVGRGRRAGRELLPPRRVEREYQYEREEREAG
V