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Tan0022245 (gene) of Snake gourd v1 genome

Gene IDTan0022245
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAuxin-responsive protein
Genome locationLG03:29197888..29198399
RNA-Seq ExpressionTan0022245
SyntenyTan0022245
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603262.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]4.7e-4682.3Show/hide
Query:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHG-----
        MPEKKKMKVKKGWLAVEVGLQEED RIERFVVPISYL+HPLFK LLDKAQE+YGYHANGPLRLPCSVDDFLQ+RW+IEKESDQ+N+KQN+ HH       
Subjt:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHG-----

Query:  YYHLPLALSFQSC
        +Y++PLALSFQSC
Subjt:  YYHLPLALSFQSC

KAG6603263.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]3.6e-4684.96Show/hide
Query:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQN--NHHHHGY--
        MPEKKKMKVKKGWLAVEVGLQEED RIERFVVPISYL+HPLFK LLDKAQE+YGYHANGPLRLPCSVDDFLQLRW+IEKESDQ+N+KQN  NH H  Y  
Subjt:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQN--NHHHHGY--

Query:  -YHLPLALSFQSC
         Y++PLALSFQSC
Subjt:  -YHLPLALSFQSC

KGN54862.1 hypothetical protein Csa_012431 [Cucumis sativus]3.1e-5088.5Show/hide
Query:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNH-----HHHG
        MPEKKKMKVKKGWLAVEVGLQEEDER+ERFVVPISYLYHPLFK LLDKAQEIYGYHANGPLRLPCSVDDFLQLRW+IEKESDQH +KQN+H     HHH 
Subjt:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNH-----HHHG

Query:  YYHLPLALSFQSC
        +YHLPLALSFQSC
Subjt:  YYHLPLALSFQSC

XP_002272614.1 PREDICTED: auxin-responsive protein SAUR32-like [Vitis vinifera]3.0e-3771.3Show/hide
Query:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHGYYHLP
        M E+KKMKVKKGWLAVEVGL+EED   +RFV+PISYLYHPLFK+LL+KAQE+YG+H  GPLRLPCSVDDFL LRWRIE+E+  H+N     HHH ++HL 
Subjt:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHGYYHLP

Query:  LALSFQSC
         ALSF SC
Subjt:  LALSFQSC

XP_022154927.1 auxin-responsive protein SAUR32-like [Momordica charantia]3.0e-4583.93Show/hide
Query:  MPEKKKMKVKKGWLAVEVGLQ-EEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNH---HHHGY
        M E+KKMKVKKGWLAVEVGLQ EED RIERFVVPISYLYHPLFKKLLDKAQE+YGYHANGPLRLPCSVDDFLQLRWRI+KESDQH+ + + H    HH +
Subjt:  MPEKKKMKVKKGWLAVEVGLQ-EEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNH---HHHGY

Query:  YHLPLALSFQSC
        YHLPLALSFQSC
Subjt:  YHLPLALSFQSC

TrEMBL top hitse value%identityAlignment
A0A0A0L2M8 SAUR family protein1.5e-5088.5Show/hide
Query:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNH-----HHHG
        MPEKKKMKVKKGWLAVEVGLQEEDER+ERFVVPISYLYHPLFK LLDKAQEIYGYHANGPLRLPCSVDDFLQLRW+IEKESDQH +KQN+H     HHH 
Subjt:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNH-----HHHG

Query:  YYHLPLALSFQSC
        +YHLPLALSFQSC
Subjt:  YYHLPLALSFQSC

A0A2R6RDI2 Auxin-responsive protein1.9e-3767.59Show/hide
Query:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHGYYHLP
        M E+KKMKVKKGWLAV VG ++ED   +RFV+PISYLYHPLFKKLL+KA E+YGYH  GPLRLPCSVDDFL LRW+IEKE+  +++  ++HHHH +Y+L 
Subjt:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHGYYHLP

Query:  LALSFQSC
         +LSF SC
Subjt:  LALSFQSC

A0A438KIZ8 Auxin-responsive protein SAUR321.5e-3771.3Show/hide
Query:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHGYYHLP
        M E+KKMKVKKGWLAVEVGL+EED   +RFV+PISYLYHPLFK+LL+KAQE+YG+H  GPLRLPCSVDDFL LRWRIE+E+  H+N     HHH ++HL 
Subjt:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHGYYHLP

Query:  LALSFQSC
         ALSF SC
Subjt:  LALSFQSC

A0A6J1DN07 auxin-responsive protein SAUR32-like1.5e-4583.93Show/hide
Query:  MPEKKKMKVKKGWLAVEVGLQ-EEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNH---HHHGY
        M E+KKMKVKKGWLAVEVGLQ EED RIERFVVPISYLYHPLFKKLLDKAQE+YGYHANGPLRLPCSVDDFLQLRWRI+KESDQH+ + + H    HH +
Subjt:  MPEKKKMKVKKGWLAVEVGLQ-EEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNH---HHHGY

Query:  YHLPLALSFQSC
        YHLPLALSFQSC
Subjt:  YHLPLALSFQSC

A0A7N2MR82 Uncharacterized protein3.3e-3770.37Show/hide
Query:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHGYYHLP
        M E KKMKVKKGWLAV+VGL++ED   +RFV+PIS+LYHPLFK+LL+KA E+YGYH  GPLRLPCSVDDFL LRWRIEKES+ H    ++HH+H + HLP
Subjt:  MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHGYYHLP

Query:  LALSFQSC
         ALSF SC
Subjt:  LALSFQSC

SwissProt top hitse value%identityAlignment
P33079 Auxin-induced protein 10A52.4e-0841.43Show/hide
Query:  KKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDFLQL
        K++ V KG+ AV VG     +++ RF +P+SYL  P F++LL +A+E +GY H  G L +PC  ++FL +
Subjt:  KKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDFLQL

P33080 Auxin-induced protein X10A1.1e-0844.12Show/hide
Query:  KKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDFL
        K ++V KG+L V VG     +++ RF++P+SYL  P F+ LL++A+E +GY H  G L +PC  D+FL
Subjt:  KKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDFL

P33081 Auxin-induced protein 15A2.4e-0847.76Show/hide
Query:  KKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDF
        K     KG+LAV VG     E+++RFV+P+SYL  P F+ LL +A+E +GY H  G L +PCS D F
Subjt:  KKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDF

P33083 Auxin-induced protein 6B7.3e-1050.75Show/hide
Query:  KKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDF
        K + V+KG+LAV VG     E++ RFV+P+SYL  P F+ LL +A+E +GY H NG L +PCS D F
Subjt:  KKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGY-HANGPLRLPCSVDDF

Q9ZUZ3 Auxin-responsive protein SAUR322.4e-1340.78Show/hide
Query:  KKKMKVK---KGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHG----Y
        K+ +KVK   KG LA++VG Q E++  +RF+VP+ Y  HPLF +LL +A++ YG+   G + +PC V++F  ++  I+ E   +N   N+HH HG    Y
Subjt:  KKKMKVK---KGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHG----Y

Query:  YHL
        +HL
Subjt:  YHL

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family1.7e-1440.78Show/hide
Query:  KKKMKVK---KGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHG----Y
        K+ +KVK   KG LA++VG Q E++  +RF+VP+ Y  HPLF +LL +A++ YG+   G + +PC V++F  ++  I+ E   +N   N+HH HG    Y
Subjt:  KKKMKVK---KGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHG----Y

Query:  YHL
        +HL
Subjt:  YHL

AT3G61900.1 SAUR-like auxin-responsive protein family1.2e-1040Show/hide
Query:  VKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKE----SDQHNNKQNN-HHHHGYYH
        V KG LA++VG +EE++  +RFVVP+ Y  HPLF +LL +A+E YG+   G + +PC V+ F  ++  I +E     D   +KQ      HG  H
Subjt:  VKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKE----SDQHNNKQNN-HHHHGYYH

AT4G00880.1 SAUR-like auxin-responsive protein family5.0e-1441.94Show/hide
Query:  KVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQH-NNKQNNHHHHGYYHL
        KV KG LAV+VG  EE    ERFV+P+ Y  HPLF +LL +A+E +G+   G + +PC V++F  ++  I++E+ +       +HHHH + HL
Subjt:  KVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQH-NNKQNNHHHHGYYHL

AT4G22620.1 SAUR-like auxin-responsive protein family3.1e-1144Show/hide
Query:  EKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRI
        E K   V +G L V VG   ED R  R VVP+ Y  HPLF +LL++A+ +YG+   G + +PC V DF +++ RI
Subjt:  EKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRI

AT5G53590.1 SAUR-like auxin-responsive protein family2.7e-1540Show/hide
Query:  VKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNK----QNNHHHH
        V KG +A+ VG ++++E + RFVVP+ +L HPLF  LL +A++ YG+  +GP+ +PC VD+F  ++  I++E+ + ++      NNH+HH
Subjt:  VKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNK----QNNHHHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGAGAAGAAGAAAATGAAGGTGAAAAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCAAGAGGAAGATGAAAGAATAGAACGCTTTGTAGTTCCCATATCCTATTT
ATATCACCCACTTTTCAAGAAGCTCTTAGACAAAGCTCAAGAAATCTATGGCTACCATGCCAATGGCCCGCTTCGGCTTCCGTGCTCAGTCGACGACTTTCTCCAGCTTC
GATGGCGGATCGAGAAAGAATCCGATCAACACAACAACAAACAGAATAATCATCACCACCATGGTTATTACCACCTTCCGCTTGCTTTGTCTTTCCAATCTTGTTGA
mRNA sequenceShow/hide mRNA sequence
GGAGAAAAAAAAAAGAACCAAAACAAAAAACATGCCTGAGAAGAAGAAAATGAAGGTGAAAAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCAAGAGGAAGATGAAAGAA
TAGAACGCTTTGTAGTTCCCATATCCTATTTATATCACCCACTTTTCAAGAAGCTCTTAGACAAAGCTCAAGAAATCTATGGCTACCATGCCAATGGCCCGCTTCGGCTT
CCGTGCTCAGTCGACGACTTTCTCCAGCTTCGATGGCGGATCGAGAAAGAATCCGATCAACACAACAACAAACAGAATAATCATCACCACCATGGTTATTACCACCTTCC
GCTTGCTTTGTCTTTCCAATCTTGTTGAGGAGTTTTATTAAATTTGAATTCATAGAGTTAGAAGATGTGAAACCCTAATTCAAAAACGATGTGTCTTGGCTTTCTTCTTG
CTGTATATCTTTTAAAATTGGCAAAGAAGAGAATTTGTGTTTTGACTTGAAGGTTAATGAATTGGAGGTTTA
Protein sequenceShow/hide protein sequence
MPEKKKMKVKKGWLAVEVGLQEEDERIERFVVPISYLYHPLFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEKESDQHNNKQNNHHHHGYYHLPLALSFQSC