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Tan0022248 (gene) of Snake gourd v1 genome

Gene IDTan0022248
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L22
Genome locationLG09:9512230..9514359
RNA-Seq ExpressionTan0022248
SyntenyTan0022248
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002671 - Ribosomal protein L22e
IPR038526 - Ribosomal protein L22e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588488.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]2.1e-42100Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

KAG6590443.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]2.1e-42100Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

XP_004135607.1 60S ribosomal protein L22-2 [Cucumis sativus]4.7e-4298.94Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        MDIASLEKFLLERIKVGGKAGALGD+VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

XP_022146066.1 60S ribosomal protein L22-2 [Momordica charantia]2.1e-42100Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

XP_022961443.1 60S ribosomal protein L22-2-like [Cucurbita moschata]2.1e-42100Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

TrEMBL top hitse value%identityAlignment
A0A6J1CY92 60S ribosomal protein L22-21.0e-42100Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

A0A6J1F0W8 60S ribosomal protein L22-21.0e-42100Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

A0A6J1HBU5 60S ribosomal protein L22-2-like1.0e-42100Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

A0A6J1HVX5 60S ribosomal protein L22-2-like1.0e-42100Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

A0A6J1I4P7 60S ribosomal protein L22-21.0e-42100Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

SwissProt top hitse value%identityAlignment
P47198 60S ribosomal protein L221.9e-2567.37Show/hide
Query:  MDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        MD A+ E+FL ERIKV GKAG L G  V++ R KSKITVTS+  FSKRYLKYLTKKYLKK+N+RDWLRV+A +K+   YELRYF I ++E EEED
Subjt:  MDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

Q90YU6 60S ribosomal protein L226.4e-2669.47Show/hide
Query:  MDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        MD A+ E+FL ERIKV GKAG L G  VS+ R KSKITVTSD  FSKRYLKYLTKKYLKK+N+RDWLRV+A  K+   YELRYF I ++E EEED
Subjt:  MDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

Q9FE58 60S ribosomal protein L22-34.1e-4190.43Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        M+IASLEKFL ERIKVGGKAGALGD+VS+TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENE EEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

Q9M9W1 60S ribosomal protein L22-21.8e-4190.43Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        M+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

Q9SRX7 Putative 60S ribosomal protein L22-11.2e-2969.15Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        ++IA+LEKFL ERIKV GKAGALG++VS+TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIA+NKD+NVYE+RYF I +     E+
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

Arabidopsis top hitse value%identityAlignment
AT1G02830.1 Ribosomal L22e protein family8.8e-3169.15Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        ++IA+LEKFL ERIKV GKAGALG++VS+TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIA+NKD+NVYE+RYF I +     E+
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

AT3G05560.1 Ribosomal L22e protein family1.3e-4290.43Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        M+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

AT3G05560.2 Ribosomal L22e protein family1.3e-4290.43Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        M+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

AT3G05560.3 Ribosomal L22e protein family1.3e-4290.43Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        M+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEGEEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

AT5G27770.1 Ribosomal L22e protein family2.9e-4290.43Show/hide
Query:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED
        M+IASLEKFL ERIKVGGKAGALGD+VS+TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENE EEED
Subjt:  MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTGCTTCTCTGGAGAAGTTTCTTCTGGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACCCGTGAGAAGAGTAAAATTAC
CGTCACTTCTGACAGTAATTTCTCCAAGAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAGAAACACAATGTGCGGGATTGGCTACGAGTGATCGCTGCCAACAAAG
ATAGGAATGTTTACGAACTCAGGTACTTCAACATTGCCGAAAACGAGGGAGAGGAAGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
CTCCAAATGAAATTTAAATGGGCCATTTCGTTTTATAAACCCTAGGTCATCCATTATATTTTCGTTTAGAACCCTAGGTCATTGGGCGGCCGTAAGCCTCAACTTCTCTG
CAGCAACTGGTATTCTCTCTTCCTCTTGGTATATTGCTACCATTGATCTGAAACAGTCGTTTTTAGGCATCAATACATTAGGGTTTCCTTCTGATTGCAGAGATTTTTGA
TCGAAAATGAGTCGAGGAGGTGCAGCCGGCCCCAAGGGAAGAAGAAGGAGTAACCTTCACAATCGACTGTTCGAAGCCAGTGGAAGATAAGATTATGGACATTGCTTCTC
TGGAGAAGTTTCTTCTGGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACCCGTGAGAAGAGTAAAATTACCGTCACTTCTGACAGT
AATTTCTCCAAGAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAGAAACACAATGTGCGGGATTGGCTACGAGTGATCGCTGCCAACAAAGATAGGAATGTTTACGA
ACTCAGGTACTTCAACATTGCCGAAAACGAGGGAGAGGAAGAGGATTAAATTTATCAATTTAGACATTGCATTCAAGGAACAAGTGTTATGTCGCTGGAATCTCTCACTG
TTTTTGTTACTAGTGTTGCTTGTGTGATGCTCTATTTTTATTTGAACTAATGCAGTTTAGCAATTTTGTTTTCTTTGACAGACTTAGAATGCTGTTATTTTTCTTGTGTC
ATATTTGATTAAGACCAACAATTTTTCACTTAAAATCATCAATGTTTCACATATCTTATGAAATCAAGGTGGATGAAAATATTTATATTTGTCTAAAA
Protein sequenceShow/hide protein sequence
MDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED