| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025159.1 gag/pol protein [Cucumis melo var. makuwa] | 2.6e-111 | 43.22 | Show/hide |
Query: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
M+VKARGG+EYFISF+DDYSR+G++YL++HKSEALEKFKE+KTEVEN L K IK LRSD GGEYMDL+FQ+YMIEHGI LS P
Subjt: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
Query: ----------------------------------------------GYPKETRDGLFYDPKEDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTIAKV
GYPKETR GLF+DP+E++VFVSTNATFLEEDH+R+HK +SK+VLSE +V
Subjt: ----------------------------------------------GYPKETRDGLFYDPKEDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTIAKV
Query: ANKTSTSTRVVDT---------------------------------------------------------------------------------NKPDGV
++ S+RV +T + P+GV
Subjt: ANKTSTSTRVVDT---------------------------------------------------------------------------------NKPDGV
Query: KPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE-----------------------------------
KPIGCKWIYKRKR GKVQTFKARLVAKGYTQ E VDYEETFSPVAM+KSIRILL IA YDYE
Subjt: KPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE-----------------------------------
Query: ------------------------------------------------------------------------------------CPTTPQGVEDMRRIPY
CP TPQ VEDMRRIPY
Subjt: ------------------------------------------------------------------------------------CPTTPQGVEDMRRIPY
Query: ASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
AS VGS MYAMLCTR +A+G+VSRYQSNPGL+HWT VK ILKYLRRTR+YMLVYGAKDL LTGYTDSDFQTDKDSRKST S+FTLNGGAVVW
Subjt: ASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
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| KAA0045330.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 1.3e-115 | 51.03 | Show/hide |
Query: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
M+VKARGG+EYFI+F DDYSR+G++YL+QHKSEALEKFKE+K EVEN L KTIKT RSD GGEYMDLKFQNY++E GI LSAP
Subjt: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
Query: --------------------------------------------------GYPKETRDGLFYDPKEDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGT
GYPK TR G FYDPK++KVFVSTNATFLEEDHIR+HK
Subjt: --------------------------------------------------GYPKETRDGLFYDPKEDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGT
Query: IAKVANKTSTSTRVVD-TNKPDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE-----------
R+ D ++PDGVKPIG KWIYKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETFSPVAM+KSI+ILL IAA +DYE
Subjt: IAKVANKTSTSTRVVD-TNKPDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE-----------
Query: -----------------------------------------------------------------------CPTTPQGVEDMRRIPYASVVGSPMYAMLC
CP TPQ V++MR IPYAS VGS MYAMLC
Subjt: -----------------------------------------------------------------------CPTTPQGVEDMRRIPYASVVGSPMYAMLC
Query: TRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
R +A+G+VSRYQSNPGL HWT VKTILKYLRRTR+YMLVYG+K+L LTGYTD DFQTD DSRKSTS S+FTLNGGAVVW
Subjt: TRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
|
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| KAA0055498.1 gag-pol fusion protein [Cucumis melo var. makuwa] | 5.1e-115 | 46.49 | Show/hide |
Query: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
M+VKARGG+EYFI+F DDYSR+G++YL+QHKSEALEKFKE+K EVEN L KTIK RSD GGEYMDLKFQNY++E GI LSAP
Subjt: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
Query: -------------GYPKETRDGLFYDPKEDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTI----AKVANKTSTSTRVVD-----------------
GYPK TR G FYDPK++K+FVS NATFLEEDHIR+HK +SKIVL+EL +V S TRVV
Subjt: -------------GYPKETRDGLFYDPKEDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTI----AKVANKTSTSTRVVD-----------------
Query: ----------------------------------------------------------------TNKPDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAK
++PDGVKPIGCKWIYKRKRG DGKVQTFKARLVAK
Subjt: ----------------------------------------------------------------TNKPDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAK
Query: GYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE----------------------------------------------------------------
GYTQVEGVDYEETFSPVAM+KSIRILL IAA +DYE
Subjt: GYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE----------------------------------------------------------------
Query: ------------------------------------------CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVK
CP TPQ VE+MR IPYAS VGS MY MLCTR +A+G+VSRYQSNP L HWT VK
Subjt: ------------------------------------------CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVK
Query: TILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
TILKYLRRTR+YMLVYG KDL LTGYTDSDFQTD+DSRKST S+FTLNGGAVVW
Subjt: TILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
|
|
| KAA0059546.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 2.4e-109 | 41.76 | Show/hide |
Query: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
M+VKARGG+EYFI+F DDYSR+G++YL+QHKSEALEKFKE+K EVEN L KTIKT RSD GGEYMDLKFQNY++E GI LSAP
Subjt: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
Query: -----------------------------------------------------------------------------------GYPKETRDGLFYDPKED
GYPK TR G YDPK++
Subjt: -----------------------------------------------------------------------------------GYPKETRDGLFYDPKED
Query: KVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTI----AKVANKTSTSTRVVD-----------------------------------------------
KVFVSTNATFLEEDHIR+HK +SKIVL+EL +V + S TRVV
Subjt: KVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTI----AKVANKTSTSTRVVD-----------------------------------------------
Query: ----------------------------------TNKPDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIA
++PDGVKPIGCKWIYKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETFSPVAM+KSIRILL IA
Subjt: ----------------------------------TNKPDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIA
Query: ACYDYE----------------------------------------------------------------------------------------------
A +DYE
Subjt: ACYDYE----------------------------------------------------------------------------------------------
Query: ------------CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSD
CP TPQ VE+MR IPYAS VGS +YAMLCTR + +G+VSRYQSNPGL HWTTVK ILKYLRRTR+YMLVYG+KDL LTGYTDSD
Subjt: ------------CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSD
Query: FQTDKDSRKSTSRSIFTLNGGAVVW
FQTD+DSRKSTS S+FTLNGGAVVW
Subjt: FQTDKDSRKSTSRSIFTLNGGAVVW
|
|
| KAA0059678.1 gag/pol protein [Cucumis melo var. makuwa] | 6.4e-110 | 43.43 | Show/hide |
Query: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
M+VKARGG+EYFI F+DDYSR+G++YL++HK EALEKFKE+K EVEN L K IK LRSD GGEYMDL+FQ+YMIEHGI LS P
Subjt: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
Query: -----------------------------------------------------------------------------------GYPKETRDGLFYDPKED
GYPKETRDGLF+DP+E+
Subjt: -----------------------------------------------------------------------------------GYPKETRDGLFYDPKED
Query: KVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTIAKVANKTSTSTRV--------------------------VDTNK----------------------
+VFVSTNATFLEEDH+RDHK +SK+VL+E +V ++ + + VD N+
Subjt: KVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTIAKVANKTSTSTRV--------------------------VDTNK----------------------
Query: -PDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE------------------------------
P+GVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EG DYEETFSPVA++KSIRI L IA YDYE
Subjt: -PDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE------------------------------
Query: -----------------------------------------------------------------CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTS
CP TPQ VEDMR IPY S VGS MY MLCTR
Subjt: -----------------------------------------------------------------CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTS
Query: LFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
+A+G+VSRYQSNPGL+HWT VK ILKYLRRTR+YMLVYGAKDL LTGYTDSDFQTDKDSRKSTS S+FTLNGGAVVW
Subjt: LFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SIN2 Gag/pol protein | 1.3e-111 | 43.22 | Show/hide |
Query: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
M+VKARGG+EYFISF+DDYSR+G++YL++HKSEALEKFKE+KTEVEN L K IK LRSD GGEYMDL+FQ+YMIEHGI LS P
Subjt: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
Query: ----------------------------------------------GYPKETRDGLFYDPKEDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTIAKV
GYPKETR GLF+DP+E++VFVSTNATFLEEDH+R+HK +SK+VLSE +V
Subjt: ----------------------------------------------GYPKETRDGLFYDPKEDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTIAKV
Query: ANKTSTSTRVVDT---------------------------------------------------------------------------------NKPDGV
++ S+RV +T + P+GV
Subjt: ANKTSTSTRVVDT---------------------------------------------------------------------------------NKPDGV
Query: KPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE-----------------------------------
KPIGCKWIYKRKR GKVQTFKARLVAKGYTQ E VDYEETFSPVAM+KSIRILL IA YDYE
Subjt: KPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE-----------------------------------
Query: ------------------------------------------------------------------------------------CPTTPQGVEDMRRIPY
CP TPQ VEDMRRIPY
Subjt: ------------------------------------------------------------------------------------CPTTPQGVEDMRRIPY
Query: ASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
AS VGS MYAMLCTR +A+G+VSRYQSNPGL+HWT VK ILKYLRRTR+YMLVYGAKDL LTGYTDSDFQTDKDSRKST S+FTLNGGAVVW
Subjt: ASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
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| A0A5A7TQ86 Retrotransposon protein, putative, Ty1-copia subclass | 6.5e-116 | 51.03 | Show/hide |
Query: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
M+VKARGG+EYFI+F DDYSR+G++YL+QHKSEALEKFKE+K EVEN L KTIKT RSD GGEYMDLKFQNY++E GI LSAP
Subjt: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
Query: --------------------------------------------------GYPKETRDGLFYDPKEDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGT
GYPK TR G FYDPK++KVFVSTNATFLEEDHIR+HK
Subjt: --------------------------------------------------GYPKETRDGLFYDPKEDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGT
Query: IAKVANKTSTSTRVVD-TNKPDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE-----------
R+ D ++PDGVKPIG KWIYKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETFSPVAM+KSI+ILL IAA +DYE
Subjt: IAKVANKTSTSTRVVD-TNKPDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE-----------
Query: -----------------------------------------------------------------------CPTTPQGVEDMRRIPYASVVGSPMYAMLC
CP TPQ V++MR IPYAS VGS MYAMLC
Subjt: -----------------------------------------------------------------------CPTTPQGVEDMRRIPYASVVGSPMYAMLC
Query: TRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
R +A+G+VSRYQSNPGL HWT VKTILKYLRRTR+YMLVYG+K+L LTGYTD DFQTD DSRKSTS S+FTLNGGAVVW
Subjt: TRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
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| A0A5A7UKD1 Gag-pol fusion protein | 2.5e-115 | 46.49 | Show/hide |
Query: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
M+VKARGG+EYFI+F DDYSR+G++YL+QHKSEALEKFKE+K EVEN L KTIK RSD GGEYMDLKFQNY++E GI LSAP
Subjt: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
Query: -------------GYPKETRDGLFYDPKEDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTI----AKVANKTSTSTRVVD-----------------
GYPK TR G FYDPK++K+FVS NATFLEEDHIR+HK +SKIVL+EL +V S TRVV
Subjt: -------------GYPKETRDGLFYDPKEDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTI----AKVANKTSTSTRVVD-----------------
Query: ----------------------------------------------------------------TNKPDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAK
++PDGVKPIGCKWIYKRKRG DGKVQTFKARLVAK
Subjt: ----------------------------------------------------------------TNKPDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAK
Query: GYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE----------------------------------------------------------------
GYTQVEGVDYEETFSPVAM+KSIRILL IAA +DYE
Subjt: GYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE----------------------------------------------------------------
Query: ------------------------------------------CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVK
CP TPQ VE+MR IPYAS VGS MY MLCTR +A+G+VSRYQSNP L HWT VK
Subjt: ------------------------------------------CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVK
Query: TILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
TILKYLRRTR+YMLVYG KDL LTGYTDSDFQTD+DSRKST S+FTLNGGAVVW
Subjt: TILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
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| A0A5A7UWW4 Gag/pol protein | 3.1e-110 | 43.43 | Show/hide |
Query: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
M+VKARGG+EYFI F+DDYSR+G++YL++HK EALEKFKE+K EVEN L K IK LRSD GGEYMDL+FQ+YMIEHGI LS P
Subjt: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
Query: -----------------------------------------------------------------------------------GYPKETRDGLFYDPKED
GYPKETRDGLF+DP+E+
Subjt: -----------------------------------------------------------------------------------GYPKETRDGLFYDPKED
Query: KVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTIAKVANKTSTSTRV--------------------------VDTNK----------------------
+VFVSTNATFLEEDH+RDHK +SK+VL+E +V ++ + + VD N+
Subjt: KVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTIAKVANKTSTSTRV--------------------------VDTNK----------------------
Query: -PDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE------------------------------
P+GVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EG DYEETFSPVA++KSIRI L IA YDYE
Subjt: -PDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIAACYDYE------------------------------
Query: -----------------------------------------------------------------CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTS
CP TPQ VEDMR IPY S VGS MY MLCTR
Subjt: -----------------------------------------------------------------CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTS
Query: LFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
+A+G+VSRYQSNPGL+HWT VK ILKYLRRTR+YMLVYGAKDL LTGYTDSDFQTDKDSRKSTS S+FTLNGGAVVW
Subjt: LFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGGAVVW
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| A0A5A7UZE3 Retrotransposon protein, putative, Ty1-copia subclass | 1.2e-109 | 41.76 | Show/hide |
Query: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
M+VKARGG+EYFI+F DDYSR+G++YL+QHKSEALEKFKE+K EVEN L KTIKT RSD GGEYMDLKFQNY++E GI LSAP
Subjt: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAP---------------
Query: -----------------------------------------------------------------------------------GYPKETRDGLFYDPKED
GYPK TR G YDPK++
Subjt: -----------------------------------------------------------------------------------GYPKETRDGLFYDPKED
Query: KVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTI----AKVANKTSTSTRVVD-----------------------------------------------
KVFVSTNATFLEEDHIR+HK +SKIVL+EL +V + S TRVV
Subjt: KVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTI----AKVANKTSTSTRVVD-----------------------------------------------
Query: ----------------------------------TNKPDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIA
++PDGVKPIGCKWIYKRKRG DGKVQTFKARLVAKGYTQVEGVDYEETFSPVAM+KSIRILL IA
Subjt: ----------------------------------TNKPDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIA
Query: ACYDYE----------------------------------------------------------------------------------------------
A +DYE
Subjt: ACYDYE----------------------------------------------------------------------------------------------
Query: ------------CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSD
CP TPQ VE+MR IPYAS VGS +YAMLCTR + +G+VSRYQSNPGL HWTTVK ILKYLRRTR+YMLVYG+KDL LTGYTDSD
Subjt: ------------CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSD
Query: FQTDKDSRKSTSRSIFTLNGGAVVW
FQTD+DSRKSTS S+FTLNGGAVVW
Subjt: FQTDKDSRKSTSRSIFTLNGGAVVW
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CV72 Secreted RxLR effector protein 161 | 7.3e-16 | 42.31 | Show/hide |
Query: MRRIPYASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVY-GAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGG
M+ +PY S VG+ MY M+ TR + A+G++S++ S+P HW +K +L+YL+ T+ Y L + A L GY+D+D+ D +SR+STS +F LNGG
Subjt: MRRIPYASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVY-GAKDLTLTGYTDSDFQTDKDSRKSTSRSIFTLNGG
Query: AVVW
V W
Subjt: AVVW
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-25 | 50.44 | Show/hide |
Query: CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTS
CPTT + +M ++PY+S VGS MYAM+CTR + A+G+VSR+ NPG EHW VK IL+YLR T L +G D L GYTD+D D D+RKS++
Subjt: CPTTPQGVEDMRRIPYASVVGSPMYAMLCTRATTSLFAIGMVSRYQSNPGLEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTS
Query: RSIFTLNGGAVVW
+FT +GGA+ W
Subjt: RSIFTLNGGAVVW
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.0e-14 | 38.2 | Show/hide |
Query: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAPGYPK
M +++ GG +YF++F+DD SR +Y+++ K + + F++F VE + G+ +K LRSD GGEY +F+ Y HGI + PG P+
Subjt: MSVKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAPGYPK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.9e-13 | 33.07 | Show/hide |
Query: EDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTIAKVANKTSTSTRVVDTNK----PDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVD
E + + ST + +D R+ + +++ + K + S + T K P G +P+ CKW++K K+ D K+ +KARLV KG+ Q +G+D
Subjt: EDKVFVSTNATFLEEDHIRDHKQKSKIVLSELDGTIAKVANKTSTSTRVVDTNK----PDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVD
Query: YEETFSPVAMVKSIRILLVIAACYDYE
++E FSPV + SIR +L +AA D E
Subjt: YEETFSPVAMVKSIRILLVIAACYDYE
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 5.1e-09 | 49.12 | Show/hide |
Query: IGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIA
+GCKW++K K DG + KARLVAKG+ Q EG+ + ET+SPV +IR +L +A
Subjt: IGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.4e-12 | 53.97 | Show/hide |
Query: PDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIA
P V +GC+WI+ +K DG + +KARLVAKGY Q G+DY ETFSPV SIRI+L +A
Subjt: PDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.5e-08 | 32.76 | Show/hide |
Query: VKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAPGYPKETRDGLFYDPKED
+ + Y Y++ FVD ++R+ +Y ++ KS+ E F FK +EN+ I T SD GGE++ L Y +HGI+ HL++P + E +GL ++
Subjt: VKARGGYEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAPGYPKETRDGLFYDPKED
Query: KVFVSTNATFLEEDHI
+ V T T L I
Subjt: KVFVSTNATFLEEDHI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.4e-12 | 53.97 | Show/hide |
Query: PDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIA
P V +GC+WI+ +K DG + +KARLVAKGY Q G+DY ETFSPV SIRI+L +A
Subjt: PDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMVKSIRILLVIA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.5e-08 | 38.27 | Show/hide |
Query: YEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAPGYPK
Y Y++ FVD ++R+ +Y ++ KS+ + F FK+ VEN+ I TL SD GGE++ L+ +Y+ +HGI+ S P P+
Subjt: YEYFISFVDDYSRFGHIYLIQHKSEALEKFKEFKTEVENQLGKTIKTLRSDLGGEYMDLKFQNYMIEHGITFHLSAPGYPK
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